RNA–Protein interactions for RNA: YNL293W

MSB3, Transcript of Rab GTPase-activating protein, yeast

Gene MSB3, Length 1,902 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSB3	YNL293W	YDL109C	Q12103	647 aa		7.44	□□□□□ -1.22
MSB3	YNL293W	PDC1	P06169	563 aa	Known RBP	7.43	□□□□□ -1.22
MSB3	YNL293W	PHO13	P19881	312 aa		7.43	□□□□□ -1.22
MSB3	YNL293W	RDS1	P25611	832 aa		7.43	□□□□□ -1.22
MSB3	YNL293W	POL4	P25615	582 aa		7.43	□□□□□ -1.22
MSB3	YNL293W	KIP2	P28743	706 aa		7.43	□□□□□ -1.22
MSB3	YNL293W	DOM34	P33309	386 aa		7.43	□□□□□ -1.22
MSB3	YNL293W	GLG1	P36143	616 aa		7.43	□□□□□ -1.22
MSB3	YNL293W	RXT2	P38255	430 aa		7.43	□□□□□ -1.22
MSB3	YNL293W	YBR225W	P38321	900 aa		7.43	□□□□□ -1.22
MSB3	YNL293W	YJL070C	P40361	888 aa		7.43	□□□□□ -1.22
MSB3	YNL293W	HGH1	P48362	394 aa	Known RBP	7.43	□□□□□ -1.22
MSB3	YNL293W	PRO2	P54885	456 aa	Known RBP	7.43	□□□□□ -1.22
MSB3	YNL293W	NOG1	Q02892	647 aa	Known RBP	7.43	□□□□□ -1.22
MSB3	YNL293W	ISU1	Q03020	165 aa		7.43	□□□□□ -1.22
MSB3	YNL293W	MLC2	Q06580	163 aa		7.43	□□□□□ -1.22
MSB3	YNL293W	SPO21	Q12411	609 aa		7.43	□□□□□ -1.22
MSB3	YNL293W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	7.42	□□□□□ -1.22	not detected
MSB3	YNL293W	KRE2	P27809	442 aa		7.42	□□□□□ -1.22
MSB3	YNL293W	MYO3	P36006	1272 aa		7.42	□□□□□ -1.22
MSB3	YNL293W	DSS1	P39112	969 aa		7.42	□□□□□ -1.22
MSB3	YNL293W	OAF1	P39720	1047 aa	Predicted RBP	7.42	□□□□□ -1.22
MSB3	YNL293W	DDI1	P40087	428 aa		7.42	□□□□□ -1.22
MSB3	YNL293W	CST6	P40535	587 aa		7.42	□□□□□ -1.22
MSB3	YNL293W	PAC11	P40960	533 aa		7.42	□□□□□ -1.22
MSB3	YNL293W	YNR063W	P53749	607 aa		7.42	□□□□□ -1.22
MSB3	YNL293W	EGD1	Q02642	157 aa	Known RBP	7.42	□□□□□ -1.22
MSB3	YNL293W	DIS3	Q08162	1001 aa	Known RBP	7.42	□□□□□ -1.22
MSB3	YNL293W	SGT1	Q08446	395 aa		7.42	□□□□□ -1.22
MSB3	YNL293W	SNU23	Q12368	194 aa	Predicted RBP	7.42	□□□□□ -1.22
MSB3	YNL293W	NTE1	Q04958	1679 aa		7.42	□□□□□ -1.22
MSB3	YNL293W	SEM1	O94742	89 aa		7.42	□□□□□ -1.22
MSB3	YNL293W	CDC19	P00549	500 aa	Known RBP	7.42	□□□□□ -1.22
MSB3	YNL293W	RAP1	P11938	827 aa		7.42	□□□□□ -1.22
MSB3	YNL293W	RAD57	P25301	460 aa		7.42	□□□□□ -1.22
MSB3	YNL293W	SWI4	P25302	1093 aa	Known RBP	7.42	□□□□□ -1.22
MSB3	YNL293W	YBL010C	P32788	280 aa		7.42	□□□□□ -1.22
MSB3	YNL293W	UBP11	P36026	717 aa		7.42	□□□□□ -1.22
MSB3	YNL293W	YBR062C	P38239	180 aa		7.42	□□□□□ -1.22
MSB3	YNL293W	TDP1	P38319	544 aa		7.42	□□□□□ -1.22
MSB3	YNL293W	KEL1	P38853	1164 aa	Known RBP	7.42	□□□□□ -1.22
MSB3	YNL293W	CCT3	P39077	534 aa	Known RBP	7.42	□□□□□ -1.22
MSB3	YNL293W	YTA12	P40341	825 aa		7.42	□□□□□ -1.22
MSB3	YNL293W	YIL077C	P40508	320 aa		7.42	□□□□□ -1.22
MSB3	YNL293W	AGE2	P40529	298 aa		7.42	□□□□□ -1.22
MSB3	YNL293W	NUP85	P46673	744 aa		7.42	□□□□□ -1.22
MSB3	YNL293W	VMA10	P48836	114 aa	Known RBP	7.42	□□□□□ -1.22
MSB3	YNL293W	PSP2	P50109	593 aa	Known RBP	7.42	□□□□□ -1.22
MSB3	YNL293W	ZIP2	P53061	704 aa		7.42	□□□□□ -1.22
MSB3	YNL293W	COS6	P53344	381 aa		7.42	□□□□□ -1.22
MSB3	YNL293W	ARC35	P53731	342 aa	Known RBP	7.42	□□□□□ -1.22
MSB3	YNL293W	ZDS2	P54786	942 aa		7.42	□□□□□ -1.22
MSB3	YNL293W	TAF9	Q05027	157 aa		7.42	□□□□□ -1.22
MSB3	YNL293W	ARG4	P04076	463 aa	Predicted RBP	7.41	□□□□□ -1.22
MSB3	YNL293W	NCP1	P16603	691 aa	Known RBP	7.41	□□□□□ -1.22
MSB3	YNL293W	SFL1	P20134	766 aa		7.41	□□□□□ -1.22
MSB3	YNL293W	MRPL8	P22353	238 aa		7.41	□□□□□ -1.22
MSB3	YNL293W	RSC6	P25632	483 aa		7.41	□□□□□ -1.22
MSB3	YNL293W	ZIP1	P31111	875 aa		7.41	□□□□□ -1.22
MSB3	YNL293W	TYE7	P33122	291 aa	Predicted RBP	7.41	□□□□□ -1.22
MSB3	YNL293W	TEF4	P36008	412 aa	Known RBP	7.41	□□□□□ -1.22
MSB3	YNL293W	OAF3	P36023	863 aa		7.41	□□□□□ -1.22
MSB3	YNL293W	TPO5	P36029	618 aa		7.41	□□□□□ -1.22
MSB3	YNL293W	TYS1	P36421	394 aa	Known RBP	7.41	□□□□□ -1.22
MSB3	YNL293W	SER33	P40510	469 aa		7.41	□□□□□ -1.22
MSB3	YNL293W	YJL049W	P47048	450 aa		7.41	□□□□□ -1.22
MSB3	YNL293W	ZRG17	P53735	605 aa		7.41	□□□□□ -1.22
MSB3	YNL293W	TFB3	Q03290	321 aa		7.41	□□□□□ -1.22
MSB3	YNL293W	GCN5	Q03330	439 aa		7.41	□□□□□ -1.22
MSB3	YNL293W	RTT109	Q07794	436 aa		7.41	□□□□□ -1.22
MSB3	YNL293W	LOT6	Q07923	191 aa		7.41	□□□□□ -1.22
MSB3	YNL293W	SIL1	Q08199	421 aa		7.41	□□□□□ -1.22
MSB3	YNL293W	GAS4	Q08271	471 aa		7.41	□□□□□ -1.22
MSB3	YNL293W	THP3	Q12049	470 aa	Known RBP	7.41	□□□□□ -1.22
MSB3	YNL293W	DAS2	Q12084	232 aa		7.41	□□□□□ -1.22
MSB3	YNL293W	MST1	P07236	462 aa		7.4	□□□□□ -1.22
MSB3	YNL293W	GLK1	P17709	500 aa	Known RBP	7.4	□□□□□ -1.22
MSB3	YNL293W	RVS161	P25343	265 aa	Known RBP	7.4	□□□□□ -1.22
MSB3	YNL293W	KRR1	P25586	316 aa	Predicted RBP	7.4	□□□□□ -1.22
MSB3	YNL293W	PEP3	P27801	918 aa		7.4	□□□□□ -1.22
MSB3	YNL293W	URA1	P28272	314 aa	Predicted RBP	7.4	□□□□□ -1.22
MSB3	YNL293W	EFT1	P32324	842 aa	Known RBP	7.4	□□□□□ -1.22
MSB3	YNL293W	NTH2	P35172	780 aa		7.4	□□□□□ -1.22
MSB3	YNL293W	PXL1	P36166	706 aa		7.4	□□□□□ -1.22
MSB3	YNL293W	MCX1	P38323	520 aa	Predicted RBP	7.4	□□□□□ -1.22
MSB3	YNL293W	RTC3	P38804	111 aa	Predicted RBP	7.4	□□□□□ -1.22
MSB3	YNL293W	SWP82	P43554	623 aa		7.4	□□□□□ -1.22
MSB3	YNL293W	BNA6	P43619	295 aa		7.4	□□□□□ -1.22
MSB3	YNL293W	YJL055W	P47044	245 aa		7.4	□□□□□ -1.22
MSB3	YNL293W	VTC4	P47075	721 aa		7.4	□□□□□ -1.22
MSB3	YNL293W	YGR153W	P48238	217 aa		7.4	□□□□□ -1.22
MSB3	YNL293W	TOF1	P53840	1238 aa		7.4	□□□□□ -1.22
MSB3	YNL293W	TMA20	P89886	181 aa	Predicted RBP	7.4	□□□□□ -1.22
MSB3	YNL293W	CPA2	P03965	1118 aa	Known RBP	7.4	□□□□□ -1.23
MSB3	YNL293W	RPL6B	P05739	176 aa	Known RBP	7.4	□□□□□ -1.23
MSB3	YNL293W	PIF1	P07271	859 aa		7.4	□□□□□ -1.23
MSB3	YNL293W	KSS1	P14681	368 aa		7.4	□□□□□ -1.23
MSB3	YNL293W	CKA2	P19454	339 aa		7.4	□□□□□ -1.23
MSB3	YNL293W	ACH1	P32316	526 aa		7.4	□□□□□ -1.23
MSB3	YNL293W	KRE6	P32486	720 aa		7.4	□□□□□ -1.23

Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms