RNA–Protein interactions for RNA: YMR260C

TIF11, Transcript of Translation initiation factor eIF1A, yeast

Gene TIF11, Length 462 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIF11	YMR260C	MLH3	Q12083	715 aa		3.64	□□□□□ -1.83
TIF11	YMR260C	YOR131C	Q12486	218 aa		3.64	□□□□□ -1.83
TIF11	YMR260C	YOL098C	Q12496	1037 aa		3.64	□□□□□ -1.83
TIF11	YMR260C	CCR4	P31384	837 aa	Known RBP	3.63	□□□□□ -1.83
TIF11	YMR260C	SEC6	P32844	805 aa		3.63	□□□□□ -1.83
TIF11	YMR260C	HSL7	P38274	827 aa		3.63	□□□□□ -1.83
TIF11	YMR260C	UBC9	P50623	157 aa	Predicted RBP	3.63	□□□□□ -1.83
TIF11	YMR260C	COG8	Q04632	607 aa		3.63	□□□□□ -1.83
TIF11	YMR260C	THI7	Q05998	598 aa		3.63	□□□□□ -1.83
TIF11	YMR260C	MRI1	Q06489	411 aa	Known RBP	3.63	□□□□□ -1.83
TIF11	YMR260C	THI22	Q06490	572 aa		3.63	□□□□□ -1.83
TIF11	YMR260C	ZRT2	Q12436	422 aa		3.63	□□□□□ -1.83
TIF11	YMR260C	Q0142	Q9ZZW4	58 aa		3.63	□□□□□ -1.83
TIF11	YMR260C	MDM10	P18409	493 aa		3.62	□□□□□ -1.83
TIF11	YMR260C	PRP28	P23394	588 aa		3.62	□□□□□ -1.83
TIF11	YMR260C	FUB1	P25659	250 aa		3.62	□□□□□ -1.83
TIF11	YMR260C	HOG1	P32485	435 aa		3.62	□□□□□ -1.83
TIF11	YMR260C	BUD6	P41697	788 aa		3.62	□□□□□ -1.83
TIF11	YMR260C	NOP9	P47077	666 aa	Known RBP	3.62	□□□□□ -1.83
TIF11	YMR260C	NHX1	Q04121	633 aa		3.62	□□□□□ -1.83
TIF11	YMR260C	RPN7	Q06103	429 aa	Known RBP	3.62	□□□□□ -1.83
TIF11	YMR260C	BMS1	Q08965	1183 aa	Known RBP	3.62	□□□□□ -1.83
TIF11	YMR260C	MEF1	P25039	761 aa		3.61	□□□□□ -1.83
TIF11	YMR260C	ORC2	P32833	620 aa		3.61	□□□□□ -1.83
TIF11	YMR260C	TIM23	P32897	222 aa		3.61	□□□□□ -1.83
TIF11	YMR260C	YEL1	P34225	687 aa		3.61	□□□□□ -1.83
TIF11	YMR260C	SET3	P36124	751 aa		3.61	□□□□□ -1.83
TIF11	YMR260C	GMH1	P36125	273 aa		3.61	□□□□□ -1.83
TIF11	YMR260C	BIT2	P38346	545 aa		3.61	□□□□□ -1.83
TIF11	YMR260C	ARP4	P80428	489 aa		3.61	□□□□□ -1.83
TIF11	YMR260C	USV1	Q12132	391 aa		3.61	□□□□□ -1.83
TIF11	YMR260C	ICT1	Q12385	394 aa		3.61	□□□□□ -1.83
TIF11	YMR260C	SRD1	P09007	221 aa		3.6	□□□□□ -1.83
TIF11	YMR260C	VPS34	P22543	875 aa		3.6	□□□□□ -1.83
TIF11	YMR260C	TMT1	P32643	299 aa		3.6	□□□□□ -1.83
TIF11	YMR260C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	3.6	□□□□□ -1.83	not detected
TIF11	YMR260C	UGO1	Q03327	502 aa		3.6	□□□□□ -1.83
TIF11	YMR260C	YLR125W	Q12138	136 aa		3.6	□□□□□ -1.83
TIF11	YMR260C	CIT2	P08679	460 aa		3.59	□□□□□ -1.83
TIF11	YMR260C	RAD18	P10862	487 aa		3.59	□□□□□ -1.83
TIF11	YMR260C	HOM2	P13663	365 aa	Known RBP	3.59	□□□□□ -1.83
TIF11	YMR260C	ABF1	P14164	731 aa		3.59	□□□□□ -1.83
TIF11	YMR260C	VBA3	P25594	458 aa		3.59	□□□□□ -1.83
TIF11	YMR260C	MSH2	P25847	964 aa		3.59	□□□□□ -1.83
TIF11	YMR260C	APN2	P38207	520 aa		3.59	□□□□□ -1.83
TIF11	YMR260C	OCA5	P38738	679 aa		3.59	□□□□□ -1.83
TIF11	YMR260C	PIG2	P40187	538 aa		3.59	□□□□□ -1.83
TIF11	YMR260C	RSC8	P43609	557 aa	Known RBP	3.59	□□□□□ -1.83
TIF11	YMR260C	SET2	P46995	733 aa	Known RBP	3.59	□□□□□ -1.83
TIF11	YMR260C	SEG1	Q04279	960 aa		3.59	□□□□□ -1.83
TIF11	YMR260C	DIA2	Q08496	732 aa	Predicted RBP	3.59	□□□□□ -1.83
TIF11	YMR260C	OSW1	Q08692	278 aa		3.59	□□□□□ -1.83
TIF11	YMR260C	KCC4	P25389	1037 aa		3.58	□□□□□ -1.84
TIF11	YMR260C	BCS1	P32839	456 aa		3.58	□□□□□ -1.84
TIF11	YMR260C	SSZ1	P38788	538 aa	Known RBP	3.58	□□□□□ -1.84
TIF11	YMR260C	YJR039W	P47107	1121 aa		3.58	□□□□□ -1.84
TIF11	YMR260C	YGR151C	P53287	111 aa		3.58	□□□□□ -1.84
TIF11	YMR260C	LEE1	Q02799	301 aa	Known RBP	3.58	□□□□□ -1.84
TIF11	YMR260C	CHS5	Q12114	671 aa	Known RBP	3.58	□□□□□ -1.84
TIF11	YMR260C	ECM3	Q99252	613 aa		3.58	□□□□□ -1.84
TIF11	YMR260C	SRP40	P32583	406 aa	Predicted RBP	3.57	□□□□□ -1.84
TIF11	YMR260C	YPT7	P32939	208 aa		3.57	□□□□□ -1.84
TIF11	YMR260C	YMC2	P38087	329 aa		3.57	□□□□□ -1.84
TIF11	YMR260C	DSS1	P39112	969 aa		3.57	□□□□□ -1.84
TIF11	YMR260C	LTP1	P40347	161 aa		3.57	□□□□□ -1.84
TIF11	YMR260C	NUP82	P40368	713 aa		3.57	□□□□□ -1.84
TIF11	YMR260C	BRE5	P53741	515 aa	Known RBP	3.57	□□□□□ -1.84
TIF11	YMR260C	RIM13	Q03792	727 aa		3.57	□□□□□ -1.84
TIF11	YMR260C	PHO8	P11491	566 aa		3.56	□□□□□ -1.84
TIF11	YMR260C	YKL091C	P33324	310 aa	Known RBP	3.56	□□□□□ -1.84
TIF11	YMR260C	CTP1	P38152	299 aa		3.56	□□□□□ -1.84
TIF11	YMR260C	MIT1	P40002	666 aa		3.56	□□□□□ -1.84
TIF11	YMR260C	ATG33	Q06485	197 aa		3.56	□□□□□ -1.84
TIF11	YMR260C	YDL086W	Q07505	273 aa		3.56	□□□□□ -1.84
TIF11	YMR260C	SLK19	Q08581	821 aa	Known RBP	3.56	□□□□□ -1.84
TIF11	YMR260C	FEN2	P25621	512 aa	Known RBP	3.55	□□□□□ -1.84
TIF11	YMR260C	PCL2	P25693	308 aa		3.55	□□□□□ -1.84
TIF11	YMR260C	PEX6	P33760	1030 aa		3.55	□□□□□ -1.84
TIF11	YMR260C	AKL1	P38080	1108 aa	Known RBP	3.55	□□□□□ -1.84
TIF11	YMR260C	PCM1	P38628	557 aa	Known RBP	3.55	□□□□□ -1.84
TIF11	YMR260C	KSP1	P38691	1029 aa	Known RBP	3.55	□□□□□ -1.84
TIF11	YMR260C	BNA3	P47039	444 aa	Known RBP	3.55	□□□□□ -1.84
TIF11	YMR260C	MPS3	P47069	682 aa		3.55	□□□□□ -1.84
TIF11	YMR260C	GLO1	P50107	326 aa		3.55	□□□□□ -1.84
TIF11	YMR260C	COX18	P53239	316 aa		3.55	□□□□□ -1.84
TIF11	YMR260C	YSH1	Q06224	779 aa	Predicted RBP	3.55	□□□□□ -1.84
TIF11	YMR260C	YAP7	Q08182	245 aa		3.55	□□□□□ -1.84
TIF11	YMR260C	DCS2	Q12123	353 aa		3.55	□□□□□ -1.84
TIF11	YMR260C	PHO5	P00635	467 aa		3.54	□□□□□ -1.84
TIF11	YMR260C	ERG20	P08524	352 aa	Known RBP	3.54	□□□□□ -1.84
TIF11	YMR260C	HMG1	P12683	1054 aa		3.54	□□□□□ -1.84
TIF11	YMR260C	SAT4	P25333	603 aa	Known RBP	3.54	□□□□□ -1.84
TIF11	YMR260C	MSS1	P32559	526 aa	Predicted RBP	3.54	□□□□□ -1.84
TIF11	YMR260C	UGP1	P32861	499 aa	Known RBP	3.54	□□□□□ -1.84
TIF11	YMR260C	DOT6	P40059	670 aa	Known RBP	3.54	□□□□□ -1.84
TIF11	YMR260C	YNL195C	P40168	261 aa		3.54	□□□□□ -1.84
TIF11	YMR260C	SEC5	P89102	971 aa		3.54	□□□□□ -1.84
TIF11	YMR260C	RKI1	Q12189	258 aa		3.54	□□□□□ -1.84
TIF11	YMR260C	POM34	Q12445	299 aa		3.54	□□□□□ -1.84
TIF11	YMR260C	PGK1	P00560	416 aa	Known RBP	3.53	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 30.2 ms