RNA–Protein interactions for RNA: YMR240C

CUS1, Transcript of Protein required for assembly of U2 snRNP into the spliceosome, yeastyeast

Gene CUS1, Length 1,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUS1YMR240C STE11P23561 717 aa5.56□□□□□ -1.52
CUS1YMR240C IMG2P25642 146 aaPredicted RBP5.56□□□□□ -1.52
CUS1YMR240C LST4P34239 828 aa5.56□□□□□ -1.52
CUS1YMR240C APT2P36973 181 aa5.56□□□□□ -1.52
CUS1YMR240C PIP2P52960 996 aa5.56□□□□□ -1.52
CUS1YMR240C RPS17AP02407 136 aaKnown RBP5.55□□□□□ -1.52
CUS1YMR240C PYC1P11154 1178 aaKnown RBP5.55□□□□□ -1.52
CUS1YMR240C GLN4P13188 809 aaKnown RBP5.55□□□□□ -1.52
CUS1YMR240C RPS17BP14127 136 aaKnown RBP5.55□□□□□ -1.52
CUS1YMR240C ATP12P22135 325 aa5.55□□□□□ -1.52
CUS1YMR240C PET127P32606 800 aa5.55□□□□□ -1.52
CUS1YMR240C VID28P40547 921 aa5.55□□□□□ -1.52
CUS1YMR240C IES1P43579 692 aa5.55□□□□□ -1.52
CUS1YMR240C ERG5P54781 538 aa5.55□□□□□ -1.52
CUS1YMR240C HMO1Q03973 246 aaKnown RBP5.55□□□□□ -1.52
CUS1YMR240C ISA1Q07821 250 aaPredicted RBP5.55□□□□□ -1.52
CUS1YMR240C GAL1P04385 528 aa5.54□□□□□ -1.52
CUS1YMR240C CDC26P14724 124 aa5.54□□□□□ -1.52
CUS1YMR240C CAD1P24813 409 aaKnown RBP5.54□□□□□ -1.52
CUS1YMR240C KCC4P25389 1037 aa5.54□□□□□ -1.52
CUS1YMR240C PWP2P25635 923 aaKnown RBP5.54□□□□□ -1.52
CUS1YMR240C PTP2P29461 750 aa5.54□□□□□ -1.52
CUS1YMR240C YKL133CP36066 463 aa5.54□□□□□ -1.52
CUS1YMR240C YHR112CP38716 378 aa5.54□□□□□ -1.52
CUS1YMR240C RSC8P43609 557 aaKnown RBP5.54□□□□□ -1.52
CUS1YMR240C ENP2P48234 707 aaKnown RBP5.54□□□□□ -1.52
CUS1YMR240C HOL1P53389 586 aa5.54□□□□□ -1.52
CUS1YMR240C ECM38Q05902 660 aaPredicted RBP5.54□□□□□ -1.52
CUS1YMR240C YPS7Q06325 596 aa5.54□□□□□ -1.52
CUS1YMR240C VHS3Q08438 674 aa5.54□□□□□ -1.52
CUS1YMR240C TGL5Q12043 749 aa5.54□□□□□ -1.52
CUS1YMR240C RRP6Q12149 733 aaKnown RBP5.54□□□□□ -1.52
CUS1YMR240C YEF3P16521 1044 aaKnown RBP5.53□□□□□ -1.52
CUS1YMR240C ACO1P19414 778 aaKnown RBP RIP-Chip data5.53□□□□□ -1.52not detected
CUS1YMR240C TOD6P34219 525 aa5.53□□□□□ -1.52
CUS1YMR240C VPS24P36095 224 aaKnown RBP5.53□□□□□ -1.52
CUS1YMR240C PMC1P38929 1173 aaPredicted RBP5.53□□□□□ -1.52
CUS1YMR240C RRP8P38961 392 aaKnown RBP5.53□□□□□ -1.52
CUS1YMR240C MRPS35P53292 345 aa5.53□□□□□ -1.52
CUS1YMR240C CNM67P53865 581 aaKnown RBP5.53□□□□□ -1.52
CUS1YMR240C VMS1Q04311 632 aaKnown RBP5.53□□□□□ -1.52
CUS1YMR240C GAD1Q04792 585 aa5.53□□□□□ -1.52
CUS1YMR240C TMA10Q06177 86 aa5.53□□□□□ -1.52
CUS1YMR240C MLC2Q06580 163 aa5.53□□□□□ -1.52
CUS1YMR240C ATG11Q12527 1178 aa5.53□□□□□ -1.52
CUS1YMR240C YLR358CO13565 187 aa5.52□□□□□ -1.53
CUS1YMR240C PIF1P07271 859 aa5.52□□□□□ -1.53
CUS1YMR240C MF(ALPHA)2P32435 120 aa5.52□□□□□ -1.53
CUS1YMR240C ELM1P32801 640 aa5.52□□□□□ -1.53
CUS1YMR240C SRP68P38687 599 aaKnown RBP5.52□□□□□ -1.53
CUS1YMR240C DUN1P39009 513 aa5.52□□□□□ -1.53
CUS1YMR240C MNN10P50108 393 aaKnown RBP5.52□□□□□ -1.53
CUS1YMR240C TEX1P53851 422 aaKnown RBP5.52□□□□□ -1.53
CUS1YMR240C RGA2Q06407 1009 aa5.52□□□□□ -1.53
CUS1YMR240C STP4Q07351 490 aa5.52□□□□□ -1.53
CUS1YMR240C NGL1Q08213 363 aaKnown RBP5.52□□□□□ -1.53
CUS1YMR240C LAS17Q12446 633 aa5.52□□□□□ -1.53
CUS1YMR240C FRS1P15624 595 aaKnown RBP5.51□□□□□ -1.53
CUS1YMR240C IME1P21190 360 aa5.51□□□□□ -1.53
CUS1YMR240C RNR1P21524 888 aaKnown RBP5.51□□□□□ -1.53
CUS1YMR240C DGR2P32330 852 aa5.51□□□□□ -1.53
CUS1YMR240C DCG1P32460 244 aa5.51□□□□□ -1.53
CUS1YMR240C HXT4P32467 576 aa5.51□□□□□ -1.53
CUS1YMR240C YPT7P32939 208 aa5.51□□□□□ -1.53
CUS1YMR240C THI80P35202 319 aa5.51□□□□□ -1.53
CUS1YMR240C FKH2P41813 862 aa5.51□□□□□ -1.53
CUS1YMR240C IRC5P43610 853 aa5.51□□□□□ -1.53
CUS1YMR240C UBX4P54730 416 aa5.51□□□□□ -1.53
CUS1YMR240C SGO1Q08490 590 aa5.51□□□□□ -1.53
CUS1YMR240C TRP4P07285 380 aaPredicted RBP5.5□□□□□ -1.53
CUS1YMR240C RIM4P38741 713 aa5.5□□□□□ -1.53
CUS1YMR240C AMA1P50082 593 aa5.5□□□□□ -1.53
CUS1YMR240C PAP2P53632 584 aaKnown RBP5.5□□□□□ -1.53
CUS1YMR240C NSE5Q03718 556 aa5.5□□□□□ -1.53
CUS1YMR240C LAT1P12695 482 aaKnown RBP5.49□□□□□ -1.53
CUS1YMR240C PGI1P12709 554 aaKnown RBP5.49□□□□□ -1.53
CUS1YMR240C HOP1P20050 605 aa5.49□□□□□ -1.53
CUS1YMR240C BAP3P41815 604 aa5.49□□□□□ -1.53
CUS1YMR240C NOP9P47077 666 aaKnown RBP5.49□□□□□ -1.53
CUS1YMR240C TAN1P53072 289 aaPredicted RBP5.49□□□□□ -1.53
CUS1YMR240C MCM6P53091 1017 aaKnown RBP5.49□□□□□ -1.53
CUS1YMR240C COX18P53239 316 aa5.49□□□□□ -1.53
CUS1YMR240C RCR2Q03446 210 aaKnown RBP5.49□□□□□ -1.53
CUS1YMR240C CTK1Q03957 528 aaKnown RBP5.49□□□□□ -1.53
CUS1YMR240C PPN1Q04119 674 aa5.49□□□□□ -1.53
CUS1YMR240C VBA4Q04602 768 aaKnown RBP5.49□□□□□ -1.53
CUS1YMR240C VPS36Q06696 566 aa5.49□□□□□ -1.53
CUS1YMR240C CWC2Q12046 339 aaPredicted RBP5.49□□□□□ -1.53
CUS1YMR240C HRP1Q99383 534 aaKnown RBP5.49□□□□□ -1.53
CUS1YMR240C ERG20P08524 352 aaKnown RBP5.48□□□□□ -1.53
CUS1YMR240C PFK1P16861 987 aaKnown RBP5.48□□□□□ -1.53
CUS1YMR240C ERG6P25087 383 aaKnown RBP5.48□□□□□ -1.53
CUS1YMR240C RNQ1P25367 405 aa5.48□□□□□ -1.53
CUS1YMR240C KTR4P38131 464 aa5.48□□□□□ -1.53
CUS1YMR240C YNL195CP40168 261 aa5.48□□□□□ -1.53
CUS1YMR240C YIR042CP40586 236 aa5.48□□□□□ -1.53
CUS1YMR240C BUD8P41698 603 aa5.48□□□□□ -1.53
CUS1YMR240C PXA1P41909 870 aa5.48□□□□□ -1.53
CUS1YMR240C BIT61P47041 543 aa5.48□□□□□ -1.53
CUS1YMR240C PUS4P48567 403 aaKnown RBP5.48□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 35.9 ms