RNA–Protein interactions for RNA: YMR077C

VPS20, Transcript of Myristoylated subunit of the ESCRT-III complex, yeast

Gene VPS20, Length 666 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS20	YMR077C	NET1	P47035	1189 aa		5.04	□□□□□ -1.6
VPS20	YMR077C	ERG11	P10614	530 aa		5.03	□□□□□ -1.6
VPS20	YMR077C	RNR1	P21524	888 aa	Known RBP	5.03	□□□□□ -1.6
VPS20	YMR077C	RPN10	P38886	268 aa	Known RBP	5.03	□□□□□ -1.6
VPS20	YMR077C	GET2	P40056	285 aa		5.03	□□□□□ -1.6
VPS20	YMR077C	DIA2	Q08496	732 aa	Predicted RBP	5.03	□□□□□ -1.6
VPS20	YMR077C	PRP28	P23394	588 aa		5.02	□□□□□ -1.61
VPS20	YMR077C	MTC2	P34246	357 aa		5.02	□□□□□ -1.61
VPS20	YMR077C	SET3	P36124	751 aa		5.02	□□□□□ -1.61
VPS20	YMR077C	NPY1	P53164	384 aa		5.02	□□□□□ -1.61
VPS20	YMR077C	RGC1	Q06108	1083 aa	Known RBP	5.02	□□□□□ -1.61
VPS20	YMR077C	BMS1	Q08965	1183 aa	Known RBP	5.02	□□□□□ -1.61
VPS20	YMR077C	SAT4	P25333	603 aa	Known RBP	5.01	□□□□□ -1.61
VPS20	YMR077C	GID8	P40208	455 aa		5.01	□□□□□ -1.61
VPS20	YMR077C	YGR151C	P53287	111 aa		5.01	□□□□□ -1.61
VPS20	YMR077C	SPC98	P53540	846 aa		5.01	□□□□□ -1.61
VPS20	YMR077C	RGT2	Q12300	763 aa		5.01	□□□□□ -1.61
VPS20	YMR077C	ADE5,7	P07244	802 aa	Known RBP	5	□□□□□ -1.61
VPS20	YMR077C	PIG2	P40187	538 aa		5	□□□□□ -1.61
VPS20	YMR077C	SCS3	P53012	380 aa		5	□□□□□ -1.61
VPS20	YMR077C	HUL5	P53119	910 aa		5	□□□□□ -1.61
VPS20	YMR077C	FMP30	Q02883	468 aa		5	□□□□□ -1.61
VPS20	YMR077C	YUR1	P26725	428 aa		4.99	□□□□□ -1.61
VPS20	YMR077C	UGP1	P32861	499 aa	Known RBP	4.99	□□□□□ -1.61
VPS20	YMR077C	STO1	P34160	861 aa	Known RBP	4.99	□□□□□ -1.61
VPS20	YMR077C	MCD4	P36051	919 aa		4.99	□□□□□ -1.61
VPS20	YMR077C	YMC2	P38087	329 aa		4.99	□□□□□ -1.61
VPS20	YMR077C	BIT2	P38346	545 aa		4.99	□□□□□ -1.61
VPS20	YMR077C	XBP1	P40489	647 aa		4.99	□□□□□ -1.61
VPS20	YMR077C	NOP9	P47077	666 aa	Known RBP	4.99	□□□□□ -1.61
VPS20	YMR077C	Q0142	Q9ZZW4	58 aa		4.98	□□□□□ -1.61
VPS20	YMR077C	STE12	P13574	688 aa		4.97	□□□□□ -1.61
VPS20	YMR077C	BCS1	P32839	456 aa		4.97	□□□□□ -1.61
VPS20	YMR077C	GDH3	P39708	457 aa		4.97	□□□□□ -1.61
VPS20	YMR077C	SNP1	Q00916	300 aa	Predicted RBP	4.97	□□□□□ -1.61
VPS20	YMR077C	THI22	Q06490	572 aa		4.97	□□□□□ -1.61
VPS20	YMR077C	YDL086W	Q07505	273 aa		4.97	□□□□□ -1.61
VPS20	YMR077C	NUP1	P20676	1076 aa		4.96	□□□□□ -1.62
VPS20	YMR077C	YKR018C	P36114	725 aa		4.96	□□□□□ -1.62
VPS20	YMR077C	KSP1	P38691	1029 aa	Known RBP	4.96	□□□□□ -1.62
VPS20	YMR077C	PMC1	P38929	1173 aa	Predicted RBP	4.96	□□□□□ -1.62
VPS20	YMR077C	CAF16	P43569	289 aa		4.96	□□□□□ -1.62
VPS20	YMR077C	COX18	P53239	316 aa		4.96	□□□□□ -1.62
VPS20	YMR077C	MPS1	P54199	764 aa		4.96	□□□□□ -1.62
VPS20	YMR077C	RPN7	Q06103	429 aa	Known RBP	4.96	□□□□□ -1.62
VPS20	YMR077C	CHS5	Q12114	671 aa	Known RBP	4.96	□□□□□ -1.62
VPS20	YMR077C	HSL7	P38274	827 aa		4.95	□□□□□ -1.62
VPS20	YMR077C	MIT1	P40002	666 aa		4.95	□□□□□ -1.62
VPS20	YMR077C	RSC8	P43609	557 aa	Known RBP	4.95	□□□□□ -1.62
VPS20	YMR077C	PCL10	P53124	433 aa		4.95	□□□□□ -1.62
VPS20	YMR077C	PHO5	P00635	467 aa		4.94	□□□□□ -1.62
VPS20	YMR077C	RAD18	P10862	487 aa		4.94	□□□□□ -1.62
VPS20	YMR077C	APN1	P22936	367 aa		4.94	□□□□□ -1.62
VPS20	YMR077C	YMC1	P32331	307 aa		4.94	□□□□□ -1.62
VPS20	YMR077C	SEC6	P32844	805 aa		4.94	□□□□□ -1.62
VPS20	YMR077C	APL3	P38065	1025 aa		4.94	□□□□□ -1.62
VPS20	YMR077C	ULA1	Q12059	462 aa		4.94	□□□□□ -1.62
VPS20	YMR077C	YKR051W	P36142	418 aa		4.93	□□□□□ -1.62
VPS20	YMR077C	CTP1	P38152	299 aa		4.93	□□□□□ -1.62
VPS20	YMR077C	ASN1	P49089	572 aa	Known RBP	4.93	□□□□□ -1.62
VPS20	YMR077C	ECM3	Q99252	613 aa		4.93	□□□□□ -1.62
VPS20	YMR077C	CHZ1	P40019	153 aa	Predicted RBP	4.92	□□□□□ -1.62
VPS20	YMR077C	STB2	P46679	850 aa		4.92	□□□□□ -1.62
VPS20	YMR077C	NHX1	Q04121	633 aa		4.92	□□□□□ -1.62
VPS20	YMR077C	HFD1	Q04458	532 aa		4.92	□□□□□ -1.62
VPS20	YMR077C	YSH1	Q06224	779 aa	Predicted RBP	4.92	□□□□□ -1.62
VPS20	YMR077C	MDM20	Q12387	796 aa	Known RBP	4.92	□□□□□ -1.62
VPS20	YMR077C	NTH1	P32356	751 aa		4.91	□□□□□ -1.62
VPS20	YMR077C	CCT5	P40413	562 aa	Known RBP	4.91	□□□□□ -1.62
VPS20	YMR077C	TAX4	P47030	604 aa		4.91	□□□□□ -1.62
VPS20	YMR077C	MPS3	P47069	682 aa		4.91	□□□□□ -1.62
VPS20	YMR077C	LAM4	P38800	1345 aa		4.91	□□□□□ -1.62
VPS20	YMR077C	TPK2	P06245	380 aa		4.9	□□□□□ -1.63
VPS20	YMR077C	CIT2	P08679	460 aa		4.9	□□□□□ -1.63
VPS20	YMR077C	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.63	not detected
VPS20	YMR077C	GSY1	P23337	708 aa		4.9	□□□□□ -1.63
VPS20	YMR077C	APN2	P38207	520 aa		4.9	□□□□□ -1.63
VPS20	YMR077C	YHR097C	P38809	366 aa	Known RBP	4.9	□□□□□ -1.63
VPS20	YMR077C	PMT6	P42934	759 aa		4.9	□□□□□ -1.63
VPS20	YMR077C	SET2	P46995	733 aa	Known RBP	4.9	□□□□□ -1.63
VPS20	YMR077C	BPL1	P48445	690 aa	Predicted RBP	4.9	□□□□□ -1.63
VPS20	YMR077C	NMA2	P53204	395 aa		4.9	□□□□□ -1.63
VPS20	YMR077C	MDM12	Q92328	271 aa		4.9	□□□□□ -1.63
VPS20	YMR077C	MBR1	P23493	339 aa		4.89	□□□□□ -1.63
VPS20	YMR077C	FEN2	P25621	512 aa	Known RBP	4.89	□□□□□ -1.63
VPS20	YMR077C	KHA1	P40309	873 aa		4.89	□□□□□ -1.63
VPS20	YMR077C	ULP2	P40537	1034 aa	Predicted RBP	4.89	□□□□□ -1.63
VPS20	YMR077C	MAL11	P53048	616 aa		4.89	□□□□□ -1.63
VPS20	YMR077C	NGL2	Q03264	515 aa	Known RBP	4.89	□□□□□ -1.63
VPS20	YMR077C	CDC53	Q12018	815 aa	Known RBP	4.89	□□□□□ -1.63
VPS20	YMR077C	RKI1	Q12189	258 aa		4.89	□□□□□ -1.63
VPS20	YMR077C	CDC9	P04819	755 aa		4.88	□□□□□ -1.63
VPS20	YMR077C	MIH1	P23748	554 aa		4.88	□□□□□ -1.63
VPS20	YMR077C	VBA3	P25594	458 aa		4.88	□□□□□ -1.63
VPS20	YMR077C	HOG1	P32485	435 aa		4.88	□□□□□ -1.63
VPS20	YMR077C	YNL195C	P40168	261 aa		4.88	□□□□□ -1.63
VPS20	YMR077C	HOT13	P36078	116 aa		4.87	□□□□□ -1.63
VPS20	YMR077C	ARP4	P80428	489 aa		4.87	□□□□□ -1.63
VPS20	YMR077C	YDR179W-A	Q03983	463 aa		4.87	□□□□□ -1.63
VPS20	YMR077C	NSE3	Q05541	303 aa		4.87	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 43.4 ms