RNA–Protein interactions for RNA: YMR046C

YMR046C, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeast

Gene YMR046C, Length 1,323 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YMR046C	YMR046C	BEM4	P39011	633 aa		4.18	□□□□□ -1.74
YMR046C	YMR046C	GID8	P40208	455 aa		4.18	□□□□□ -1.74
YMR046C	YMR046C	YJR120W	P47157	116 aa		4.18	□□□□□ -1.74
YMR046C	YMR046C	COX18	P53239	316 aa		4.18	□□□□□ -1.74
YMR046C	YMR046C	YHM2	Q04013	314 aa		4.18	□□□□□ -1.74
YMR046C	YMR046C	ISA1	Q07821	250 aa	Predicted RBP	4.18	□□□□□ -1.74
YMR046C	YMR046C	YLR040C	Q07988	224 aa		4.18	□□□□□ -1.74
YMR046C	YMR046C	FRE5	Q08908	694 aa		4.18	□□□□□ -1.74
YMR046C	YMR046C	ALG7	P07286	448 aa		4.17	□□□□□ -1.74
YMR046C	YMR046C	LAT1	P12695	482 aa	Known RBP	4.17	□□□□□ -1.74
YMR046C	YMR046C	RNR1	P21524	888 aa	Known RBP	4.17	□□□□□ -1.74
YMR046C	YMR046C	MTL1	P53214	551 aa		4.17	□□□□□ -1.74
YMR046C	YMR046C	KIN4	Q01919	800 aa		4.17	□□□□□ -1.74
YMR046C	YMR046C	RNT1	Q02555	471 aa		4.17	□□□□□ -1.74
YMR046C	YMR046C	CTK1	Q03957	528 aa	Known RBP	4.17	□□□□□ -1.74
YMR046C	YMR046C	YLR407W	Q06070	228 aa		4.17	□□□□□ -1.74
YMR046C	YMR046C	TRE2	Q08693	809 aa		4.17	□□□□□ -1.74
YMR046C	YMR046C	ATG11	Q12527	1178 aa		4.17	□□□□□ -1.74
YMR046C	YMR046C	RPS21A	P0C0V8	87 aa	Known RBP	4.16	□□□□□ -1.74
YMR046C	YMR046C	IMG2	P25642	146 aa	Predicted RBP	4.16	□□□□□ -1.74
YMR046C	YMR046C	SEC65	P29478	273 aa		4.16	□□□□□ -1.74
YMR046C	YMR046C	DAL3	P32459	195 aa		4.16	□□□□□ -1.74
YMR046C	YMR046C	OAF3	P36023	863 aa		4.16	□□□□□ -1.74
YMR046C	YMR046C	YBR071W	P38243	211 aa		4.16	□□□□□ -1.74
YMR046C	YMR046C	PAF1	P38351	445 aa		4.16	□□□□□ -1.74
YMR046C	YMR046C	YNL195C	P40168	261 aa		4.16	□□□□□ -1.74
YMR046C	YMR046C	HOS4	P40480	1083 aa		4.16	□□□□□ -1.74
YMR046C	YMR046C	AIM21	P40563	679 aa		4.16	□□□□□ -1.74
YMR046C	YMR046C	SNM1	P40993	198 aa		4.16	□□□□□ -1.74
YMR046C	YMR046C	FOL1	P53848	824 aa		4.16	□□□□□ -1.74
YMR046C	YMR046C	PTA1	Q01329	785 aa	Predicted RBP	4.16	□□□□□ -1.74
YMR046C	YMR046C	YMR210W	Q03649	449 aa		4.16	□□□□□ -1.74
YMR046C	YMR046C	HMO1	Q03973	246 aa	Known RBP	4.16	□□□□□ -1.74
YMR046C	YMR046C	YOL073C	Q08232	322 aa		4.16	□□□□□ -1.74
YMR046C	YMR046C	HFI1	Q12060	488 aa		4.16	□□□□□ -1.74
YMR046C	YMR046C	HRP1	Q99383	534 aa	Known RBP	4.16	□□□□□ -1.74
YMR046C	YMR046C	SWI6	P09959	803 aa		4.15	□□□□□ -1.75
YMR046C	YMR046C	MRC1	P25588	1096 aa		4.15	□□□□□ -1.75
YMR046C	YMR046C	YKU70	P32807	602 aa		4.15	□□□□□ -1.75
YMR046C	YMR046C	TOM20	P35180	183 aa		4.15	□□□□□ -1.75
YMR046C	YMR046C	LYS9	P38999	446 aa		4.15	□□□□□ -1.75
YMR046C	YMR046C	BAP3	P41815	604 aa		4.15	□□□□□ -1.75
YMR046C	YMR046C	DUG1	P43616	481 aa	Known RBP	4.15	□□□□□ -1.75
YMR046C	YMR046C	ADY4	Q05955	493 aa		4.15	□□□□□ -1.75
YMR046C	YMR046C	URN1	Q06525	465 aa	Known RBP	4.15	□□□□□ -1.75
YMR046C	YMR046C	VHS3	Q08438	674 aa		4.15	□□□□□ -1.75
YMR046C	YMR046C	SGO1	Q08490	590 aa		4.15	□□□□□ -1.75
YMR046C	YMR046C	IRC13	Q08630	104 aa		4.15	□□□□□ -1.75
YMR046C	YMR046C	PPR1	P07272	904 aa	Predicted RBP	4.14	□□□□□ -1.75
YMR046C	YMR046C	HIS7	P33734	552 aa	Known RBP	4.14	□□□□□ -1.75
YMR046C	YMR046C	FAT1	P38225	669 aa		4.14	□□□□□ -1.75
YMR046C	YMR046C	BCD1	P38772	366 aa		4.14	□□□□□ -1.75
YMR046C	YMR046C	FMO1	P38866	432 aa		4.14	□□□□□ -1.75
YMR046C	YMR046C	GET2	P40056	285 aa		4.14	□□□□□ -1.75
YMR046C	YMR046C	GPP2	P40106	250 aa	Known RBP	4.14	□□□□□ -1.75
YMR046C	YMR046C	YJL163C	P46996	555 aa		4.14	□□□□□ -1.75
YMR046C	YMR046C	NOP9	P47077	666 aa	Known RBP	4.14	□□□□□ -1.75
YMR046C	YMR046C	NOP15	P53927	220 aa	Predicted RBP	4.14	□□□□□ -1.75
YMR046C	YMR046C	COG6	P53959	839 aa		4.14	□□□□□ -1.75
YMR046C	YMR046C	RMP1	Q12530	201 aa		4.14	□□□□□ -1.75
YMR046C	YMR046C	APM4	Q99186	491 aa		4.14	□□□□□ -1.75
YMR046C	YMR046C	ECM3	Q99252	613 aa		4.14	□□□□□ -1.75
YMR046C	YMR046C	FRS1	P15624	595 aa	Known RBP	4.13	□□□□□ -1.75
YMR046C	YMR046C	AEP2	P22136	580 aa		4.13	□□□□□ -1.75
YMR046C	YMR046C	CCT3	P39077	534 aa	Known RBP	4.13	□□□□□ -1.75
YMR046C	YMR046C	NUP60	P39705	539 aa		4.13	□□□□□ -1.75
YMR046C	YMR046C	RSC8	P43609	557 aa	Known RBP	4.13	□□□□□ -1.75
YMR046C	YMR046C	UBC11	P52492	156 aa		4.13	□□□□□ -1.75
YMR046C	YMR046C	YPS7	Q06325	596 aa		4.13	□□□□□ -1.75
YMR046C	YMR046C	VPS36	Q06696	566 aa		4.13	□□□□□ -1.75
YMR046C	YMR046C	RPS17A	P02407	136 aa	Known RBP	4.12	□□□□□ -1.75
YMR046C	YMR046C	GLN4	P13188	809 aa	Known RBP	4.12	□□□□□ -1.75
YMR046C	YMR046C	RPS17B	P14127	136 aa	Known RBP	4.12	□□□□□ -1.75
YMR046C	YMR046C	MVD1	P32377	396 aa	Known RBP	4.12	□□□□□ -1.75
YMR046C	YMR046C	PET127	P32606	800 aa		4.12	□□□□□ -1.75
YMR046C	YMR046C	PPS1	P38148	807 aa		4.12	□□□□□ -1.75
YMR046C	YMR046C	NIT2	P47016	307 aa		4.12	□□□□□ -1.75
YMR046C	YMR046C	RGC1	Q06108	1083 aa	Known RBP	4.12	□□□□□ -1.75
YMR046C	YMR046C	DIA2	Q08496	732 aa	Predicted RBP	4.12	□□□□□ -1.75
YMR046C	YMR046C	ERG20	P08524	352 aa	Known RBP	4.11	□□□□□ -1.75
YMR046C	YMR046C	PEX1	P24004	1043 aa		4.11	□□□□□ -1.75
YMR046C	YMR046C	SER1	P33330	395 aa	Known RBP	4.11	□□□□□ -1.75
YMR046C	YMR046C	ENP1	P38333	483 aa	Known RBP	4.11	□□□□□ -1.75
YMR046C	YMR046C	REV7	P38927	245 aa		4.11	□□□□□ -1.75
YMR046C	YMR046C	DUN1	P39009	513 aa		4.11	□□□□□ -1.75
YMR046C	YMR046C	VID28	P40547	921 aa		4.11	□□□□□ -1.75
YMR046C	YMR046C	RCR2	Q03446	210 aa	Known RBP	4.11	□□□□□ -1.75
YMR046C	YMR046C	SKY1	Q03656	742 aa		4.11	□□□□□ -1.75
YMR046C	YMR046C	YMR206W	Q03695	313 aa		4.11	□□□□□ -1.75
YMR046C	YMR046C	YPR027C	Q12079	277 aa		4.11	□□□□□ -1.75
YMR046C	YMR046C	IME1	P21190	360 aa		4.1	□□□□□ -1.75
YMR046C	YMR046C	HIR1	P32479	840 aa		4.1	□□□□□ -1.75
YMR046C	YMR046C	TFC4	P33339	1025 aa		4.1	□□□□□ -1.75
YMR046C	YMR046C	BIT2	P38346	545 aa		4.1	□□□□□ -1.75
YMR046C	YMR046C	SFB3	P38810	929 aa		4.1	□□□□□ -1.75
YMR046C	YMR046C	FMP52	P40008	231 aa		4.1	□□□□□ -1.75
YMR046C	YMR046C	BIT61	P47041	543 aa		4.1	□□□□□ -1.75
YMR046C	YMR046C	PAN2	P53010	1115 aa	Predicted RBP	4.1	□□□□□ -1.75
YMR046C	YMR046C	PEX14	P53112	341 aa		4.1	□□□□□ -1.75
YMR046C	YMR046C	SPC105	P53148	917 aa		4.1	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms