RNA–Protein interactions for RNA: YLR398C

SKI2, Transcript of Ski complex component and putative RNA helicase, yeastyeast

Gene SKI2, Length 3,864 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKI2YLR398C RFX1P48743 811 aa6.43□□□□□ -1.38
SKI2YLR398C VID30P53076 958 aa6.43□□□□□ -1.38
SKI2YLR398C AAD16Q02895 342 aa6.43□□□□□ -1.38
SKI2YLR398C YMR010WQ03687 405 aa6.43□□□□□ -1.38
SKI2YLR398C TFC6Q06339 672 aa6.43□□□□□ -1.38
SKI2YLR398C YDL073WQ07454 984 aa6.43□□□□□ -1.38
SKI2YLR398C CDC33P07260 213 aaKnown RBP6.42□□□□□ -1.38
SKI2YLR398C VTC4P47075 721 aa6.42□□□□□ -1.38
SKI2YLR398C YGR021WP53212 290 aa6.42□□□□□ -1.38
SKI2YLR398C MDR1P53258 950 aa6.42□□□□□ -1.38
SKI2YLR398C NOG2P53742 486 aaKnown RBP6.42□□□□□ -1.38
SKI2YLR398C MCM21Q06675 368 aa6.42□□□□□ -1.38
SKI2YLR398C DTD1Q07648 150 aaKnown RBP6.42□□□□□ -1.38
SKI2YLR398C RRD2Q12461 358 aa6.42□□□□□ -1.38
SKI2YLR398C YIL002W-AQ3E7Z5 69 aa6.42□□□□□ -1.38
SKI2YLR398C PUT2P07275 575 aa6.42□□□□□ -1.38
SKI2YLR398C RPL8AP17076 256 aaKnown RBP6.42□□□□□ -1.38
SKI2YLR398C CPS1P27614 576 aa6.42□□□□□ -1.38
SKI2YLR398C CRM1P30822 1084 aaKnown RBP6.42□□□□□ -1.38
SKI2YLR398C BMH2P34730 273 aaKnown RBP6.42□□□□□ -1.38
SKI2YLR398C MTW1P39731 289 aa6.42□□□□□ -1.38
SKI2YLR398C UBP7P40453 1071 aa6.42□□□□□ -1.38
SKI2YLR398C PTK2P47116 818 aaKnown RBP6.42□□□□□ -1.38
SKI2YLR398C HDA1P53973 706 aa6.42□□□□□ -1.38
SKI2YLR398C FDC1Q03034 503 aa6.42□□□□□ -1.38
SKI2YLR398C HEH2Q03281 663 aa6.42□□□□□ -1.38
SKI2YLR398C YMR196WQ04336 1088 aa6.42□□□□□ -1.38
SKI2YLR398C LDB17Q12342 491 aa6.42□□□□□ -1.38
SKI2YLR398C YAP1P19880 650 aaKnown RBP6.42□□□□□ -1.38
SKI2YLR398C GCD7P32502 381 aaPredicted RBP6.42□□□□□ -1.38
SKI2YLR398C NUP82P40368 713 aa6.42□□□□□ -1.38
SKI2YLR398C PRM2P40534 656 aa6.42□□□□□ -1.38
SKI2YLR398C AIM23P47015 356 aa6.42□□□□□ -1.38
SKI2YLR398C FRK1Q03002 865 aaPredicted RBP6.42□□□□□ -1.38
SKI2YLR398C MUS81Q04149 632 aaPredicted RBP6.42□□□□□ -1.38
SKI2YLR398C PDR8Q06149 701 aa6.42□□□□□ -1.38
SKI2YLR398C TFB4Q12004 338 aa6.42□□□□□ -1.38
SKI2YLR398C NCA2Q12374 616 aa6.42□□□□□ -1.38
SKI2YLR398C NHA1Q99271 985 aa6.42□□□□□ -1.38
SKI2YLR398C URB1P34241 1764 aaKnown RBP6.41□□□□□ -1.38
SKI2YLR398C RPO41P13433 1351 aaKnown RBP6.41□□□□□ -1.38
SKI2YLR398C MET17P06106 444 aa6.41□□□□□ -1.38
SKI2YLR398C CNA1P23287 553 aa6.41□□□□□ -1.38
SKI2YLR398C ATG19P35193 415 aa6.41□□□□□ -1.38
SKI2YLR398C UGA2P38067 497 aa6.41□□□□□ -1.38
SKI2YLR398C PDX3P38075 228 aaKnown RBP6.41□□□□□ -1.38
SKI2YLR398C DAK2P43550 591 aa6.41□□□□□ -1.38
SKI2YLR398C UBP15P50101 1230 aa6.41□□□□□ -1.38
SKI2YLR398C YET2Q04210 160 aa6.41□□□□□ -1.38
SKI2YLR398C GGA1Q06336 557 aa6.41□□□□□ -1.38
SKI2YLR398C YPR202WQ08993 238 aa6.41□□□□□ -1.38
SKI2YLR398C DCD1P06773 312 aa6.41□□□□□ -1.38
SKI2YLR398C ART10P18634 518 aaKnown RBP6.41□□□□□ -1.38
SKI2YLR398C BCD1P38772 366 aa6.41□□□□□ -1.38
SKI2YLR398C YJL049WP47048 450 aa6.41□□□□□ -1.38
SKI2YLR398C NGL3Q03210 505 aa6.41□□□□□ -1.38
SKI2YLR398C MLC2Q06580 163 aa6.41□□□□□ -1.38
SKI2YLR398C TRM11Q12463 433 aa6.41□□□□□ -1.38
SKI2YLR398C KGD2P19262 463 aaPredicted RBP6.41□□□□□ -1.38
SKI2YLR398C ADY2P25613 283 aa6.41□□□□□ -1.38
SKI2YLR398C ITR2P30606 609 aa6.41□□□□□ -1.38
SKI2YLR398C YBL036CP38197 257 aa6.41□□□□□ -1.38
SKI2YLR398C EXO5P38289 585 aa6.41□□□□□ -1.38
SKI2YLR398C SMX2P40204 77 aaKnown RBP6.41□□□□□ -1.38
SKI2YLR398C JEM1P40358 645 aa6.41□□□□□ -1.38
SKI2YLR398C STB1P42845 420 aa6.41□□□□□ -1.38
SKI2YLR398C BIO4P53630 237 aa6.41□□□□□ -1.38
SKI2YLR398C PGA2P53903 129 aa6.41□□□□□ -1.38
SKI2YLR398C PRP42Q03776 544 aaKnown RBP6.41□□□□□ -1.38
SKI2YLR398C SPS22P25380 463 aa6.4□□□□□ -1.38
SKI2YLR398C YME1P32795 747 aa6.4□□□□□ -1.38
SKI2YLR398C PXA2P34230 853 aa6.4□□□□□ -1.38
SKI2YLR398C SSO2P39926 295 aa6.4□□□□□ -1.38
SKI2YLR398C DPH1P40487 425 aaKnown RBP6.4□□□□□ -1.38
SKI2YLR398C FMP33P46998 180 aa6.4□□□□□ -1.38
SKI2YLR398C UTP8P53276 713 aaKnown RBP6.4□□□□□ -1.38
SKI2YLR398C ECI1Q05871 280 aa6.4□□□□□ -1.38
SKI2YLR398C YLR177WQ06251 628 aa6.4□□□□□ -1.38
SKI2YLR398C YLL032CQ07834 825 aaKnown RBP RIP-Chip data6.4□□□□□ -1.38not detected
SKI2YLR398C YOR131CQ12486 218 aa6.4□□□□□ -1.38
SKI2YLR398C CLN3P13365 580 aa6.4□□□□□ -1.38
SKI2YLR398C MSH2P25847 964 aa6.4□□□□□ -1.38
SKI2YLR398C HIR2P32480 875 aa6.4□□□□□ -1.38
SKI2YLR398C RCR1P38212 213 aa6.4□□□□□ -1.38
SKI2YLR398C POP4P38336 279 aa6.4□□□□□ -1.38
SKI2YLR398C PIK1P39104 1066 aa6.4□□□□□ -1.38
SKI2YLR398C SQS1P53866 767 aaKnown RBP6.4□□□□□ -1.38
SKI2YLR398C KTR5P53966 522 aaPredicted RBP6.4□□□□□ -1.38
SKI2YLR398C YML108WQ03759 105 aa6.4□□□□□ -1.38
SKI2YLR398C PPM1Q04081 328 aa6.4□□□□□ -1.38
SKI2YLR398C NOP6Q07623 225 aaKnown RBP6.4□□□□□ -1.38
SKI2YLR398C SLX4Q12098 748 aa6.4□□□□□ -1.38
SKI2YLR398C YPT6Q99260 215 aa6.4□□□□□ -1.38
SKI2YLR398C BCK1Q01389 1478 aa6.4□□□□□ -1.39
SKI2YLR398C CCP1P00431 361 aa6.4□□□□□ -1.39
SKI2YLR398C CDC31P06704 161 aaKnown RBP6.4□□□□□ -1.39
SKI2YLR398C SPB1P25582 841 aaPredicted RBP6.4□□□□□ -1.39
SKI2YLR398C VPS35P34110 944 aa6.4□□□□□ -1.39
SKI2YLR398C DLD3P39976 496 aaKnown RBP6.4□□□□□ -1.39
SKI2YLR398C MIT1P40002 666 aa6.4□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms