RNA–Protein interactions for RNA: YLR397C

AFG2, Transcript of ATPase of the CDC48/PAS1/SEC18 (AAA) family, forms a hexameric complex, yeastyeast

Gene AFG2, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFG2YLR397C PXA1P41909 870 aa7.63□□□□□ -1.19
AFG2YLR397C IMD3P50095 523 aaKnown RBP7.63□□□□□ -1.19
AFG2YLR397C ALT1P52893 592 aa7.63□□□□□ -1.19
AFG2YLR397C SLT2Q00772 484 aa7.63□□□□□ -1.19
AFG2YLR397C FCP1Q03254 732 aa7.63□□□□□ -1.19
AFG2YLR397C TAF10Q12030 206 aa7.63□□□□□ -1.19
AFG2YLR397C THP3Q12049 470 aaKnown RBP7.63□□□□□ -1.19
AFG2YLR397C YOR093CQ12275 1648 aa7.62□□□□□ -1.19
AFG2YLR397C MSB1P21339 1137 aaKnown RBP7.62□□□□□ -1.19
AFG2YLR397C YCR051WP25631 222 aa7.62□□□□□ -1.19
AFG2YLR397C PWP2P25635 923 aaKnown RBP7.62□□□□□ -1.19
AFG2YLR397C YKL063CP35725 167 aa7.62□□□□□ -1.19
AFG2YLR397C RSM22P36056 628 aa7.62□□□□□ -1.19
AFG2YLR397C BNA3P47039 444 aaKnown RBP7.62□□□□□ -1.19
AFG2YLR397C FYV6P53913 173 aa7.62□□□□□ -1.19
AFG2YLR397C AAD16Q02895 342 aa7.62□□□□□ -1.19
AFG2YLR397C PNP1Q05788 311 aa7.62□□□□□ -1.19
AFG2YLR397C RGC1Q06108 1083 aaKnown RBP7.62□□□□□ -1.19
AFG2YLR397C DCS2Q12123 353 aa7.62□□□□□ -1.19
AFG2YLR397C RAD61Q99359 647 aa7.62□□□□□ -1.19
AFG2YLR397C SEC63P14906 663 aa7.62□□□□□ -1.19
AFG2YLR397C NCP1P16603 691 aaKnown RBP7.62□□□□□ -1.19
AFG2YLR397C HSP60P19882 572 aaKnown RBP7.62□□□□□ -1.19
AFG2YLR397C MEI4P29467 408 aa7.62□□□□□ -1.19
AFG2YLR397C SAC6P32599 642 aaKnown RBP7.62□□□□□ -1.19
AFG2YLR397C YHR219WP38900 624 aa7.62□□□□□ -1.19
AFG2YLR397C DDI1P40087 428 aa7.62□□□□□ -1.19
AFG2YLR397C MNT3P40549 630 aa7.62□□□□□ -1.19
AFG2YLR397C YJR054WP47114 497 aa7.62□□□□□ -1.19
AFG2YLR397C YGR054WP53235 642 aaKnown RBP7.62□□□□□ -1.19
AFG2YLR397C DRN1P53255 507 aaKnown RBP7.62□□□□□ -1.19
AFG2YLR397C CNM67P53865 581 aaKnown RBP7.62□□□□□ -1.19
AFG2YLR397C UBX4P54730 416 aa7.62□□□□□ -1.19
AFG2YLR397C ABZ2Q03266 374 aa7.62□□□□□ -1.19
AFG2YLR397C YMR114CQ04471 368 aaKnown RBP7.62□□□□□ -1.19
AFG2YLR397C YOR289WQ12012 251 aaPredicted RBP7.62□□□□□ -1.19
AFG2YLR397C VTH2P40890 1549 aa7.62□□□□□ -1.19
AFG2YLR397C USO1P25386 1790 aa7.61□□□□□ -1.19
AFG2YLR397C PFK2P16862 959 aaKnown RBP RIP-Chip data7.61□□□□□ -1.19not detected
AFG2YLR397C APN1P22936 367 aa7.61□□□□□ -1.19
AFG2YLR397C CAD1P24813 409 aaKnown RBP7.61□□□□□ -1.19
AFG2YLR397C KIP2P28743 706 aa7.61□□□□□ -1.19
AFG2YLR397C RAM2P29703 316 aa7.61□□□□□ -1.19
AFG2YLR397C EFT1P32324 842 aaKnown RBP7.61□□□□□ -1.19
AFG2YLR397C XRS2P33301 854 aa7.61□□□□□ -1.19
AFG2YLR397C SLM4P38247 162 aa7.61□□□□□ -1.19
AFG2YLR397C TDP1P38319 544 aa7.61□□□□□ -1.19
AFG2YLR397C MBP1P39678 833 aa7.61□□□□□ -1.19
AFG2YLR397C BRE2P43132 505 aa7.61□□□□□ -1.19
AFG2YLR397C SWP82P43554 623 aa7.61□□□□□ -1.19
AFG2YLR397C UME1Q03010 460 aa7.61□□□□□ -1.19
AFG2YLR397C ACL4Q03771 387 aa7.61□□□□□ -1.19
AFG2YLR397C SEY1Q99287 776 aa7.61□□□□□ -1.19
AFG2YLR397C RRP5Q05022 1729 aaKnown RBP7.61□□□□□ -1.19
AFG2YLR397C CLN3P13365 580 aa7.61□□□□□ -1.19
AFG2YLR397C RED1P14291 827 aa7.61□□□□□ -1.19
AFG2YLR397C RAD4P14736 754 aa7.61□□□□□ -1.19
AFG2YLR397C RET1P22276 1149 aaKnown RBP7.61□□□□□ -1.19
AFG2YLR397C MRPL32P25348 183 aa7.61□□□□□ -1.19
AFG2YLR397C YHR112CP38716 378 aa7.61□□□□□ -1.19
AFG2YLR397C SMX2P40204 77 aaKnown RBP7.61□□□□□ -1.19
AFG2YLR397C PEF1P53238 335 aa7.61□□□□□ -1.19
AFG2YLR397C FOX2Q02207 900 aaKnown RBP7.61□□□□□ -1.19
AFG2YLR397C INA17Q02888 182 aa7.61□□□□□ -1.19
AFG2YLR397C TAP42Q04372 366 aa7.61□□□□□ -1.19
AFG2YLR397C VTH1P40438 1549 aa7.6□□□□□ -1.19
AFG2YLR397C RPS17AP02407 136 aaKnown RBP7.6□□□□□ -1.19
AFG2YLR397C RPS17BP14127 136 aaKnown RBP7.6□□□□□ -1.19
AFG2YLR397C RGP1P16664 663 aa7.6□□□□□ -1.19
AFG2YLR397C RPC53P25441 422 aa7.6□□□□□ -1.19
AFG2YLR397C VMA8P32610 256 aaKnown RBP7.6□□□□□ -1.19
AFG2YLR397C RAD24P32641 659 aa7.6□□□□□ -1.19
AFG2YLR397C DOM34P33309 386 aa7.6□□□□□ -1.19
AFG2YLR397C SQT1P35184 431 aa7.6□□□□□ -1.19
AFG2YLR397C MYO3P36006 1272 aa7.6□□□□□ -1.19
AFG2YLR397C KEL1P38853 1164 aaKnown RBP7.6□□□□□ -1.19
AFG2YLR397C HXT6P39003 570 aaKnown RBP7.6□□□□□ -1.19
AFG2YLR397C HXT7P39004 570 aa7.6□□□□□ -1.19
AFG2YLR397C GDH3P39708 457 aa7.6□□□□□ -1.19
AFG2YLR397C GID8P40208 455 aa7.6□□□□□ -1.19
AFG2YLR397C GPD2P41911 440 aaKnown RBP7.6□□□□□ -1.19
AFG2YLR397C YJR039WP47107 1121 aa7.6□□□□□ -1.19
AFG2YLR397C RMR1P53060 241 aa7.6□□□□□ -1.19
AFG2YLR397C RNH1Q04740 348 aa7.6□□□□□ -1.19
AFG2YLR397C RSC3Q06639 885 aa7.6□□□□□ -1.19
AFG2YLR397C GIC2Q06648 383 aa7.6□□□□□ -1.19
AFG2YLR397C GET4Q12125 312 aa7.6□□□□□ -1.19
AFG2YLR397C KAR1P11927 433 aa7.6□□□□□ -1.19
AFG2YLR397C COQ8P27697 501 aa7.6□□□□□ -1.19
AFG2YLR397C PEP3P27801 918 aa7.6□□□□□ -1.19
AFG2YLR397C ITR1P30605 584 aa7.6□□□□□ -1.19
AFG2YLR397C CRM1P30822 1084 aaKnown RBP7.6□□□□□ -1.19
AFG2YLR397C PRP19P32523 503 aaKnown RBP7.6□□□□□ -1.19
AFG2YLR397C TYE7P33122 291 aaPredicted RBP7.6□□□□□ -1.19
AFG2YLR397C YKT6P36015 200 aaKnown RBP7.6□□□□□ -1.19
AFG2YLR397C KIC1P38692 1080 aa7.6□□□□□ -1.19
AFG2YLR397C ALG5P40350 334 aa7.6□□□□□ -1.19
AFG2YLR397C DIE2P50076 525 aa7.6□□□□□ -1.19
AFG2YLR397C DBP6P53734 629 aaKnown RBP7.6□□□□□ -1.19
AFG2YLR397C PKH3Q03306 898 aaPredicted RBP7.6□□□□□ -1.19
Retrieved 100 of 5,963 RNA–protein pairs in 43.8 ms