RNA–Protein interactions for RNA: YLR396C

VPS33, Transcript of ATP-binding protein that is a subunit of the HOPS and CORVET complexes, yeast

Gene VPS33, Length 2,076 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS33	YLR396C	YCR015C	P25616	317 aa		4.07	□□□□□ -1.76
VPS33	YLR396C	HRR25	P29295	494 aa	Known RBP	4.07	□□□□□ -1.76
VPS33	YLR396C	PMI40	P29952	429 aa	Known RBP	4.07	□□□□□ -1.76
VPS33	YLR396C	TOM20	P35180	183 aa		4.07	□□□□□ -1.76
VPS33	YLR396C	OAF3	P36023	863 aa		4.07	□□□□□ -1.76
VPS33	YLR396C	ELO3	P40319	345 aa		4.07	□□□□□ -1.76
VPS33	YLR396C	DUG1	P43616	481 aa	Known RBP	4.07	□□□□□ -1.76
VPS33	YLR396C	AMA1	P50082	593 aa		4.07	□□□□□ -1.76
VPS33	YLR396C	MUP1	P50276	574 aa		4.07	□□□□□ -1.76
VPS33	YLR396C	FOL1	P53848	824 aa		4.07	□□□□□ -1.76
VPS33	YLR396C	REC102	Q02721	264 aa		4.07	□□□□□ -1.76
VPS33	YLR396C	GAD1	Q04792	585 aa		4.07	□□□□□ -1.76
VPS33	YLR396C	ATG11	Q12527	1178 aa		4.07	□□□□□ -1.76
VPS33	YLR396C	MET3	P08536	511 aa		4.07	□□□□□ -1.76
VPS33	YLR396C	RPS21A	P0C0V8	87 aa	Known RBP	4.07	□□□□□ -1.76
VPS33	YLR396C	LAT1	P12695	482 aa	Known RBP	4.07	□□□□□ -1.76
VPS33	YLR396C	APT2	P36973	181 aa		4.07	□□□□□ -1.76
VPS33	YLR396C	AIM39	Q08223	395 aa		4.07	□□□□□ -1.76
VPS33	YLR396C	TRE2	Q08693	809 aa		4.07	□□□□□ -1.76
VPS33	YLR396C	TY1B-DR4	Q07793	1604 aa		4.06	□□□□□ -1.76
VPS33	YLR396C	SEC3	P33332	1336 aa	Known RBP	4.06	□□□□□ -1.76
VPS33	YLR396C	SSM4	P40318	1319 aa		4.06	□□□□□ -1.76
VPS33	YLR396C	PYC1	P11154	1178 aa	Known RBP	4.06	□□□□□ -1.76
VPS33	YLR396C	CAF20	P12962	161 aa	Known RBP	4.06	□□□□□ -1.76
VPS33	YLR396C	ERG4	P25340	473 aa		4.06	□□□□□ -1.76
VPS33	YLR396C	TRM2	P33753	639 aa		4.06	□□□□□ -1.76
VPS33	YLR396C	YKR075C	P36155	307 aa		4.06	□□□□□ -1.76
VPS33	YLR396C	TRZ1	P36159	838 aa	Predicted RBP	4.06	□□□□□ -1.76
VPS33	YLR396C	KTR4	P38131	464 aa		4.06	□□□□□ -1.76
VPS33	YLR396C	GPP2	P40106	250 aa	Known RBP	4.06	□□□□□ -1.76
VPS33	YLR396C	HOS4	P40480	1083 aa		4.06	□□□□□ -1.76
VPS33	YLR396C	YIR042C	P40586	236 aa		4.06	□□□□□ -1.76
VPS33	YLR396C	BAP3	P41815	604 aa		4.06	□□□□□ -1.76
VPS33	YLR396C	COG6	P53959	839 aa		4.06	□□□□□ -1.76
VPS33	YLR396C	YLR407W	Q06070	228 aa		4.06	□□□□□ -1.76
VPS33	YLR396C	YLR040C	Q07988	224 aa		4.06	□□□□□ -1.76
VPS33	YLR396C	HRP1	Q99383	534 aa	Known RBP	4.06	□□□□□ -1.76
VPS33	YLR396C	STU1	P38198	1513 aa		4.06	□□□□□ -1.76
VPS33	YLR396C	ERG6	P25087	383 aa	Known RBP	4.06	□□□□□ -1.76
VPS33	YLR396C	SEC65	P29478	273 aa		4.06	□□□□□ -1.76
VPS33	YLR396C	DAL3	P32459	195 aa		4.06	□□□□□ -1.76
VPS33	YLR396C	NIT2	P47016	307 aa		4.06	□□□□□ -1.76
VPS33	YLR396C	YHM2	Q04013	314 aa		4.06	□□□□□ -1.76
VPS33	YLR396C	SPT6	P23615	1451 aa	Known RBP	4.05	□□□□□ -1.76
VPS33	YLR396C	RNR1	P21524	888 aa	Known RBP	4.05	□□□□□ -1.76
VPS33	YLR396C	IMG2	P25642	146 aa	Predicted RBP	4.05	□□□□□ -1.76
VPS33	YLR396C	YKU70	P32807	602 aa		4.05	□□□□□ -1.76
VPS33	YLR396C	FAT1	P38225	669 aa		4.05	□□□□□ -1.76
VPS33	YLR396C	LYS9	P38999	446 aa		4.05	□□□□□ -1.76
VPS33	YLR396C	BFA1	P47113	574 aa		4.05	□□□□□ -1.76
VPS33	YLR396C	PTA1	Q01329	785 aa	Predicted RBP	4.05	□□□□□ -1.76
VPS33	YLR396C	KIN4	Q01919	800 aa		4.05	□□□□□ -1.76
VPS33	YLR396C	ISA1	Q07821	250 aa	Predicted RBP	4.05	□□□□□ -1.76
VPS33	YLR396C	NUP170	P38181	1502 aa		4.05	□□□□□ -1.76
VPS33	YLR396C	AEP2	P22136	580 aa		4.04	□□□□□ -1.76
VPS33	YLR396C	GET2	P40056	285 aa		4.04	□□□□□ -1.76
VPS33	YLR396C	YNL195C	P40168	261 aa		4.04	□□□□□ -1.76
VPS33	YLR396C	MTL1	P53214	551 aa		4.04	□□□□□ -1.76
VPS33	YLR396C	NOP15	P53927	220 aa	Predicted RBP	4.04	□□□□□ -1.76
VPS33	YLR396C	RNT1	Q02555	471 aa		4.04	□□□□□ -1.76
VPS33	YLR396C	FRE5	Q08908	694 aa		4.04	□□□□□ -1.76
VPS33	YLR396C	YPT7	P32939	208 aa		4.04	□□□□□ -1.76
VPS33	YLR396C	YKL222C	P35995	705 aa		4.04	□□□□□ -1.76
VPS33	YLR396C	YJL163C	P46996	555 aa		4.04	□□□□□ -1.76
VPS33	YLR396C	NOP9	P47077	666 aa	Known RBP	4.04	□□□□□ -1.76
VPS33	YLR396C	YMR210W	Q03649	449 aa		4.04	□□□□□ -1.76
VPS33	YLR396C	CTK1	Q03957	528 aa	Known RBP	4.04	□□□□□ -1.76
VPS33	YLR396C	ADY4	Q05955	493 aa		4.04	□□□□□ -1.76
VPS33	YLR396C	YPS7	Q06325	596 aa		4.04	□□□□□ -1.76
VPS33	YLR396C	RMP1	Q12530	201 aa		4.04	□□□□□ -1.76
VPS33	YLR396C	HIR3	P47171	1648 aa		4.04	□□□□□ -1.76
VPS33	YLR396C	THO2	P53552	1597 aa	Known RBP	4.03	□□□□□ -1.76
VPS33	YLR396C	REV3	P14284	1504 aa		4.03	□□□□□ -1.76
VPS33	YLR396C	IME2	P32581	645 aa		4.03	□□□□□ -1.76
VPS33	YLR396C	SER1	P33330	395 aa	Known RBP	4.03	□□□□□ -1.76
VPS33	YLR396C	TCB2	P48231	1178 aa		4.03	□□□□□ -1.76
VPS33	YLR396C	RCR2	Q03446	210 aa	Known RBP	4.03	□□□□□ -1.76
VPS33	YLR396C	VHS3	Q08438	674 aa		4.03	□□□□□ -1.76
VPS33	YLR396C	PPR1	P07272	904 aa	Predicted RBP	4.02	□□□□□ -1.77
VPS33	YLR396C	ALG7	P07286	448 aa		4.02	□□□□□ -1.77
VPS33	YLR396C	IME1	P21190	360 aa		4.02	□□□□□ -1.77
VPS33	YLR396C	PET127	P32606	800 aa		4.02	□□□□□ -1.77
VPS33	YLR396C	SUL1	P38359	859 aa		4.02	□□□□□ -1.77
VPS33	YLR396C	BCD1	P38772	366 aa		4.02	□□□□□ -1.77
VPS33	YLR396C	FMO1	P38866	432 aa		4.02	□□□□□ -1.77
VPS33	YLR396C	IES1	P43579	692 aa		4.02	□□□□□ -1.77
VPS33	YLR396C	SUN4	P53616	420 aa		4.02	□□□□□ -1.77
VPS33	YLR396C	RGC1	Q06108	1083 aa	Known RBP	4.02	□□□□□ -1.77
VPS33	YLR396C	VPS36	Q06696	566 aa		4.02	□□□□□ -1.77
VPS33	YLR396C	YOL073C	Q08232	322 aa		4.02	□□□□□ -1.77
VPS33	YLR396C	IRC13	Q08630	104 aa		4.02	□□□□□ -1.77
VPS33	YLR396C	ECM3	Q99252	613 aa		4.02	□□□□□ -1.77
VPS33	YLR396C	PDR10	P51533	1564 aa		4.02	□□□□□ -1.77
VPS33	YLR396C	SSK2	P53599	1579 aa		4.02	□□□□□ -1.77
VPS33	YLR396C	BPT1	P14772	1559 aa		4.02	□□□□□ -1.77
VPS33	YLR396C	RPS17A	P02407	136 aa	Known RBP	4.02	□□□□□ -1.77
VPS33	YLR396C	GLN4	P13188	809 aa	Known RBP	4.02	□□□□□ -1.77
VPS33	YLR396C	RPS17B	P14127	136 aa	Known RBP	4.02	□□□□□ -1.77
VPS33	YLR396C	CDC26	P14724	124 aa		4.02	□□□□□ -1.77
VPS33	YLR396C	FRS1	P15624	595 aa	Known RBP	4.02	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms