RNA–Protein interactions for RNA: YLR087C

CSF1, Transcript of Protein required for fermentation at low temperature, yeastyeast

Gene CSF1, Length 8,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSF1YLR087C RRN3P36070 627 aa2.43□□□□□ -2.02
CSF1YLR087C YPR174CQ06616 221 aaPredicted RBP2.43□□□□□ -2.02
CSF1YLR087C MDM36Q06820 579 aa2.43□□□□□ -2.02
CSF1YLR087C YOR223WQ12015 292 aa2.43□□□□□ -2.02
CSF1YLR087C TAF10Q12030 206 aa2.43□□□□□ -2.02
CSF1YLR087C OCA6Q12454 224 aa2.43□□□□□ -2.02
CSF1YLR087C SUP35P05453 685 aaKnown RBP2.43□□□□□ -2.02
CSF1YLR087C MRP7P12687 371 aa2.43□□□□□ -2.02
CSF1YLR087C PGS1P25578 521 aa2.43□□□□□ -2.02
CSF1YLR087C GUT1P32190 709 aa2.43□□□□□ -2.02
CSF1YLR087C YBL028CP38202 106 aa2.43□□□□□ -2.02
CSF1YLR087C SOP4P39543 234 aaPredicted RBP2.43□□□□□ -2.02
CSF1YLR087C PCL7P40186 285 aa2.43□□□□□ -2.02
CSF1YLR087C MMM1P41800 426 aa2.43□□□□□ -2.02
CSF1YLR087C YGR210CP42942 411 aa2.43□□□□□ -2.02
CSF1YLR087C SSU72P53538 206 aaPredicted RBP2.43□□□□□ -2.02
CSF1YLR087C FPK1P53739 893 aa2.43□□□□□ -2.02
CSF1YLR087C YET2Q04210 160 aa2.43□□□□□ -2.02
CSF1YLR087C YPS7Q06325 596 aa2.43□□□□□ -2.02
CSF1YLR087C THI3Q07471 609 aa2.43□□□□□ -2.02
CSF1YLR087C DIN7Q12086 430 aa2.43□□□□□ -2.02
CSF1YLR087C HER1Q12276 1246 aa2.43□□□□□ -2.02
CSF1YLR087C WHI2P12611 486 aa2.43□□□□□ -2.02
CSF1YLR087C HSP104P31539 908 aaKnown RBP2.43□□□□□ -2.02
CSF1YLR087C KAP104P38217 918 aaKnown RBP2.43□□□□□ -2.02
CSF1YLR087C VPS45P38932 577 aa2.43□□□□□ -2.02
CSF1YLR087C NUP82P40368 713 aa2.43□□□□□ -2.02
CSF1YLR087C PRK1P40494 810 aa2.43□□□□□ -2.02
CSF1YLR087C PMS1P14242 873 aa2.43□□□□□ -2.02
CSF1YLR087C SSD1P24276 1250 aaKnown RBP RIP-Chip data2.43□□□□□ -2.02not detected
CSF1YLR087C HEM3P28789 327 aa2.43□□□□□ -2.02
CSF1YLR087C ALG5P40350 334 aa2.43□□□□□ -2.02
CSF1YLR087C ZIP2P53061 704 aa2.43□□□□□ -2.02
CSF1YLR087C YSA1Q01976 231 aa2.43□□□□□ -2.02
CSF1YLR087C OMS1Q06668 471 aa2.43□□□□□ -2.02
CSF1YLR087C FRE5Q08908 694 aa2.43□□□□□ -2.02
CSF1YLR087C APC9Q12107 265 aa2.43□□□□□ -2.02
CSF1YLR087C PDE2P06776 526 aa2.42□□□□□ -2.02
CSF1YLR087C PET494P07390 489 aaPredicted RBP2.42□□□□□ -2.02
CSF1YLR087C MRPL8P22353 238 aa2.42□□□□□ -2.02
CSF1YLR087C YCR016WP25617 290 aaKnown RBP2.42□□□□□ -2.02
CSF1YLR087C KRE6P32486 720 aa2.42□□□□□ -2.02
CSF1YLR087C YHL012WP38709 493 aa2.42□□□□□ -2.02
CSF1YLR087C YDR089WP38966 869 aa2.42□□□□□ -2.02
CSF1YLR087C RTT105P40063 208 aa2.42□□□□□ -2.02
CSF1YLR087C VPS53P47061 822 aa2.42□□□□□ -2.02
CSF1YLR087C CCT8P47079 568 aaKnown RBP2.42□□□□□ -2.02
CSF1YLR087C SUB2Q07478 446 aaKnown RBP2.42□□□□□ -2.02
CSF1YLR087C PER33Q12144 273 aa2.42□□□□□ -2.02
CSF1YLR087C PRP6P19735 899 aaPredicted RBP2.42□□□□□ -2.02
CSF1YLR087C BUD31P25337 157 aaPredicted RBP2.42□□□□□ -2.02
CSF1YLR087C KES1P35844 434 aaKnown RBP2.42□□□□□ -2.02
CSF1YLR087C SET3P36124 751 aa2.42□□□□□ -2.02
CSF1YLR087C RRP8P38961 392 aaKnown RBP2.42□□□□□ -2.02
CSF1YLR087C SOK1P40317 901 aa2.42□□□□□ -2.02
CSF1YLR087C SPO22P40511 975 aa2.42□□□□□ -2.02
CSF1YLR087C VPS9P54787 451 aa2.42□□□□□ -2.02
CSF1YLR087C HPC2Q01448 625 aa2.42□□□□□ -2.02
CSF1YLR087C RTR2Q12378 196 aa2.42□□□□□ -2.02
CSF1YLR087C RPL25P04456 142 aaKnown RBP2.42□□□□□ -2.02
CSF1YLR087C ILS1P09436 1072 aaKnown RBP2.42□□□□□ -2.02
CSF1YLR087C MSH1P25846 959 aa2.42□□□□□ -2.02
CSF1YLR087C MTC2P34246 357 aa2.42□□□□□ -2.02
CSF1YLR087C ALG3P38179 458 aa2.42□□□□□ -2.02
CSF1YLR087C YBR137WP38276 179 aa2.42□□□□□ -2.02
CSF1YLR087C UME6P39001 836 aa2.42□□□□□ -2.02
CSF1YLR087C RCY1P39531 840 aa2.42□□□□□ -2.02
CSF1YLR087C LSM8P47093 109 aaKnown RBP2.42□□□□□ -2.02
CSF1YLR087C SLD7Q08457 257 aa2.42□□□□□ -2.02
CSF1YLR087C TRE1Q08919 783 aa2.42□□□□□ -2.02
CSF1YLR087C TRL1P09880 827 aaKnown RBP2.42□□□□□ -2.02
CSF1YLR087C ABF1P14164 731 aa2.42□□□□□ -2.02
CSF1YLR087C MSD1P15179 658 aaKnown RBP2.42□□□□□ -2.02
CSF1YLR087C FZO1P38297 855 aa2.42□□□□□ -2.02
CSF1YLR087C FMC1P40491 155 aa2.42□□□□□ -2.02
CSF1YLR087C MNP1P53163 194 aaPredicted RBP2.42□□□□□ -2.02
CSF1YLR087C MFM1Q02783 413 aa2.42□□□□□ -2.02
CSF1YLR087C YMR010WQ03687 405 aa2.42□□□□□ -2.02
CSF1YLR087C PDS5Q04264 1277 aa2.42□□□□□ -2.02
CSF1YLR087C SPO20Q04359 397 aa2.42□□□□□ -2.02
CSF1YLR087C AIM7Q12156 149 aa2.42□□□□□ -2.02
CSF1YLR087C TEF1P02994 458 aaKnown RBP2.42□□□□□ -2.02
CSF1YLR087C AFG2P32794 780 aa2.42□□□□□ -2.02
CSF1YLR087C OCT1P35999 772 aa2.42□□□□□ -2.02
CSF1YLR087C VPS21P36017 210 aaKnown RBP2.42□□□□□ -2.02
CSF1YLR087C SAW1P39735 261 aa2.42□□□□□ -2.02
CSF1YLR087C HLJ1P48353 224 aa2.42□□□□□ -2.02
CSF1YLR087C LGE1Q02796 332 aaKnown RBP2.42□□□□□ -2.02
CSF1YLR087C NHX1Q04121 633 aa2.42□□□□□ -2.02
CSF1YLR087C ISW2Q08773 1120 aa2.42□□□□□ -2.02
CSF1YLR087C MET6P05694 767 aaKnown RBP2.42□□□□□ -2.02
CSF1YLR087C PRP9P19736 530 aaKnown RBP2.42□□□□□ -2.02
CSF1YLR087C DOA4P32571 926 aa2.42□□□□□ -2.02
CSF1YLR087C PTC3P34221 468 aaKnown RBP2.42□□□□□ -2.02
CSF1YLR087C YHR219WP38900 624 aa2.42□□□□□ -2.02
CSF1YLR087C SUM1P46676 1062 aa2.42□□□□□ -2.02
CSF1YLR087C MDV1P47025 714 aa2.42□□□□□ -2.02
CSF1YLR087C RAD17P48581 401 aa2.42□□□□□ -2.02
CSF1YLR087C MNT2P53059 558 aa2.42□□□□□ -2.02
CSF1YLR087C PRM15Q03262 622 aa2.42□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms