RNA–Protein interactions for RNA: YLR005W

SSL1, Transcript of Subunit of the core form of RNA polymerase transcription factor TFIIH, yeastyeast

Gene SSL1, Length 1,386 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSL1YLR005W MRL1Q06815 381 aa4.4□□□□□ -1.7
SSL1YLR005W ESC8Q08119 714 aa4.4□□□□□ -1.7
SSL1YLR005W SPO21Q12411 609 aa4.4□□□□□ -1.7
SSL1YLR005W RAD50P12753 1312 aa4.4□□□□□ -1.71
SSL1YLR005W SPS1P08458 490 aa4.4□□□□□ -1.71
SSL1YLR005W RNR3P21672 869 aaKnown RBP4.4□□□□□ -1.71
SSL1YLR005W CAD1P24813 409 aaKnown RBP4.4□□□□□ -1.71
SSL1YLR005W KIN82P25341 720 aa4.4□□□□□ -1.71
SSL1YLR005W MSS51P32335 436 aa4.4□□□□□ -1.71
SSL1YLR005W MKK2P32491 506 aa4.4□□□□□ -1.71
SSL1YLR005W TVP38P36164 337 aa4.4□□□□□ -1.71
SSL1YLR005W FYV10P40492 516 aa4.4□□□□□ -1.71
SSL1YLR005W YFL054CP43549 646 aa4.4□□□□□ -1.71
SSL1YLR005W PSP2P50109 593 aaKnown RBP4.4□□□□□ -1.71
SSL1YLR005W YNL034WP53963 612 aa4.4□□□□□ -1.71
SSL1YLR005W YNL018CP53976 612 aa4.4□□□□□ -1.71
SSL1YLR005W EMI2Q04409 500 aaKnown RBP4.4□□□□□ -1.71
SSL1YLR005W TFC6Q06339 672 aa4.4□□□□□ -1.71
SSL1YLR005W DSE3Q08729 430 aa4.4□□□□□ -1.71
SSL1YLR005W RIM20Q12033 661 aa4.4□□□□□ -1.71
SSL1YLR005W PRP6P19735 899 aaPredicted RBP4.39□□□□□ -1.71
SSL1YLR005W PEP7P32609 515 aa4.39□□□□□ -1.71
SSL1YLR005W TVP23P38962 199 aa4.39□□□□□ -1.71
SSL1YLR005W HXT13P39924 564 aa4.39□□□□□ -1.71
SSL1YLR005W FMP10P40098 244 aa4.39□□□□□ -1.71
SSL1YLR005W CSM2P40465 213 aa4.39□□□□□ -1.71
SSL1YLR005W VID30P53076 958 aa4.39□□□□□ -1.71
SSL1YLR005W TNA1P53322 534 aa4.39□□□□□ -1.71
SSL1YLR005W HXT17P53631 564 aa4.39□□□□□ -1.71
SSL1YLR005W HXT15P54854 567 aa4.39□□□□□ -1.71
SSL1YLR005W OYE2Q03558 400 aaKnown RBP4.39□□□□□ -1.71
SSL1YLR005W NKP2Q06162 153 aa4.39□□□□□ -1.71
SSL1YLR005W NBA1Q08229 501 aaKnown RBP4.39□□□□□ -1.71
SSL1YLR005W RSB1Q08417 382 aa4.39□□□□□ -1.71
SSL1YLR005W YPL277CQ08989 487 aa4.39□□□□□ -1.71
SSL1YLR005W YLR422WQ06409 1932 aa4.38□□□□□ -1.71
SSL1YLR005W CIT1P00890 479 aa4.38□□□□□ -1.71
SSL1YLR005W VAS1P07806 1104 aaKnown RBP4.38□□□□□ -1.71
SSL1YLR005W YCR015CP25616 317 aa4.38□□□□□ -1.71
SSL1YLR005W URK1P27515 501 aa4.38□□□□□ -1.71
SSL1YLR005W PEP3P27801 918 aa4.38□□□□□ -1.71
SSL1YLR005W PRS1P32895 427 aaKnown RBP4.38□□□□□ -1.71
SSL1YLR005W TOD6P34219 525 aa4.38□□□□□ -1.71
SSL1YLR005W AAP1P37898 856 aaKnown RBP4.38□□□□□ -1.71
SSL1YLR005W APN2P38207 520 aa4.38□□□□□ -1.71
SSL1YLR005W STB5P38699 743 aa4.38□□□□□ -1.71
SSL1YLR005W NDT80P38830 627 aa4.38□□□□□ -1.71
SSL1YLR005W BUD16P39988 312 aa4.38□□□□□ -1.71
SSL1YLR005W YEL025CP39991 1188 aa4.38□□□□□ -1.71
SSL1YLR005W SNO2P53823 222 aa4.38□□□□□ -1.71
SSL1YLR005W CNM67P53865 581 aaKnown RBP4.38□□□□□ -1.71
SSL1YLR005W SIW14P53965 281 aa4.38□□□□□ -1.71
SSL1YLR005W FPR4Q06205 392 aaPredicted RBP4.38□□□□□ -1.71
SSL1YLR005W PGK1P00560 416 aaKnown RBP4.37□□□□□ -1.71
SSL1YLR005W RPS13P05756 151 aaKnown RBP4.37□□□□□ -1.71
SSL1YLR005W TAF13P11747 167 aa4.37□□□□□ -1.71
SSL1YLR005W UBC1P21734 215 aaKnown RBP4.37□□□□□ -1.71
SSL1YLR005W MLS1P30952 554 aa4.37□□□□□ -1.71
SSL1YLR005W IMP2'P32351 346 aa4.37□□□□□ -1.71
SSL1YLR005W SAS3P34218 831 aa4.37□□□□□ -1.71
SSL1YLR005W ABZ1P37254 787 aaPredicted RBP4.37□□□□□ -1.71
SSL1YLR005W CCZ1P38273 704 aa4.37□□□□□ -1.71
SSL1YLR005W SUL1P38359 859 aa4.37□□□□□ -1.71
SSL1YLR005W CCT3P39077 534 aaKnown RBP4.37□□□□□ -1.71
SSL1YLR005W MMF1P40185 145 aaKnown RBP4.37□□□□□ -1.71
SSL1YLR005W GNP1P48813 663 aa4.37□□□□□ -1.71
SSL1YLR005W ART5P53244 586 aaKnown RBP4.37□□□□□ -1.71
SSL1YLR005W ZPR1P53303 486 aaKnown RBP4.37□□□□□ -1.71
SSL1YLR005W HDA1P53973 706 aa4.37□□□□□ -1.71
SSL1YLR005W SVF1Q05515 481 aa4.37□□□□□ -1.71
SSL1YLR005W PHM6Q05637 104 aa4.37□□□□□ -1.71
SSL1YLR005W RRP15Q06511 250 aaPredicted RBP4.37□□□□□ -1.71
SSL1YLR005W HFI1Q12060 488 aa4.37□□□□□ -1.71
SSL1YLR005W YOR111WQ99210 232 aa4.37□□□□□ -1.71
SSL1YLR005W NUM1Q00402 2748 aa4.36□□□□□ -1.71
SSL1YLR005W YER152CP10356 443 aa4.36□□□□□ -1.71
SSL1YLR005W SNF5P18480 905 aa4.36□□□□□ -1.71
SSL1YLR005W SYP1P25623 870 aaKnown RBP4.36□□□□□ -1.71
SSL1YLR005W BAP2P38084 609 aa4.36□□□□□ -1.71
SSL1YLR005W SLX1P38324 304 aa4.36□□□□□ -1.71
SSL1YLR005W GIP4P39732 760 aa4.36□□□□□ -1.71
SSL1YLR005W OPT1P40897 799 aa4.36□□□□□ -1.71
SSL1YLR005W HUL4P40985 892 aa4.36□□□□□ -1.71
SSL1YLR005W CTR1P49573 406 aa4.36□□□□□ -1.71
SSL1YLR005W ALT2P52892 507 aa4.36□□□□□ -1.71
SSL1YLR005W RIM8P53179 542 aa4.36□□□□□ -1.71
SSL1YLR005W LCD1Q04377 747 aa4.36□□□□□ -1.71
SSL1YLR005W YDR341CQ05506 607 aaKnown RBP4.36□□□□□ -1.71
SSL1YLR005W YLR455WQ06188 304 aa4.36□□□□□ -1.71
SSL1YLR005W PIG1Q06216 648 aa4.36□□□□□ -1.71
SSL1YLR005W HIF1Q12373 385 aa4.36□□□□□ -1.71
SSL1YLR005W PUF4P25339 888 aaKnown RBP RIP-Chip data4.35□□□□□ -1.71not detected
SSL1YLR005W HEM3P28789 327 aa4.35□□□□□ -1.71
SSL1YLR005W DID4P36108 232 aa4.35□□□□□ -1.71
SSL1YLR005W DRE2P36152 348 aa4.35□□□□□ -1.71
SSL1YLR005W MRPL7P36519 292 aa4.35□□□□□ -1.71
SSL1YLR005W ESL1P40456 1118 aa4.35□□□□□ -1.71
SSL1YLR005W GCV2P49095 1034 aa4.35□□□□□ -1.71
SSL1YLR005W ASE1P50275 885 aa4.35□□□□□ -1.71
SSL1YLR005W YNL134CP53912 376 aaKnown RBP4.35□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 88 ms