RNA–Protein interactions for RNA: YKL197C

PEX1, Transcript of AAA-peroxin, yeastyeast

Gene PEX1, Length 3,132 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX1YKL197C SPN1Q06505 410 aaPredicted RBP3.62□□□□□ -1.83
PEX1YKL197C REX3Q12090 404 aa3.62□□□□□ -1.83
PEX1YKL197C RAV1P47104 1357 aa3.62□□□□□ -1.83
PEX1YKL197C CNS1P33313 385 aa3.62□□□□□ -1.83
PEX1YKL197C YKL050CP35736 922 aa3.62□□□□□ -1.83
PEX1YKL197C ARL1P38116 183 aaKnown RBP3.62□□□□□ -1.83
PEX1YKL197C MSC7P38694 644 aa3.62□□□□□ -1.83
PEX1YKL197C TCD1P38756 429 aa3.62□□□□□ -1.83
PEX1YKL197C YHI9P38765 294 aa3.62□□□□□ -1.83
PEX1YKL197C RRM3P38766 723 aa3.62□□□□□ -1.83
PEX1YKL197C LRP1P38801 184 aaKnown RBP3.62□□□□□ -1.83
PEX1YKL197C TAT2P38967 592 aa3.62□□□□□ -1.83
PEX1YKL197C VAC8P39968 578 aa3.62□□□□□ -1.83
PEX1YKL197C DLD3P39976 496 aaKnown RBP3.62□□□□□ -1.83
PEX1YKL197C RIO2P40160 425 aaKnown RBP3.62□□□□□ -1.83
PEX1YKL197C RNR4P49723 345 aaKnown RBP3.62□□□□□ -1.83
PEX1YKL197C DSE4P53753 1117 aa3.62□□□□□ -1.83
PEX1YKL197C ERV25P54837 211 aaKnown RBP3.62□□□□□ -1.83
PEX1YKL197C MRS2Q01926 470 aa3.62□□□□□ -1.83
PEX1YKL197C HOS3Q02959 697 aaKnown RBP3.62□□□□□ -1.83
PEX1YKL197C YML108WQ03759 105 aa3.62□□□□□ -1.83
PEX1YKL197C ENT1Q12518 454 aa3.62□□□□□ -1.83
PEX1YKL197C YGR161W-CQ3E744 92 aa3.62□□□□□ -1.83
PEX1YKL197C ALG1P16661 449 aa3.61□□□□□ -1.83
PEX1YKL197C ISY1P21374 235 aaPredicted RBP3.61□□□□□ -1.83
PEX1YKL197C MRC1P25588 1096 aa3.61□□□□□ -1.83
PEX1YKL197C RDS1P25611 832 aa3.61□□□□□ -1.83
PEX1YKL197C MSH2P25847 964 aa3.61□□□□□ -1.83
PEX1YKL197C BOI1P38041 980 aaKnown RBP3.61□□□□□ -1.83
PEX1YKL197C YBR197CP38306 217 aa3.61□□□□□ -1.83
PEX1YKL197C SMF2P38778 549 aa3.61□□□□□ -1.83
PEX1YKL197C MBP1P39678 833 aa3.61□□□□□ -1.83
PEX1YKL197C PCL7P40186 285 aa3.61□□□□□ -1.83
PEX1YKL197C MGR3Q04472 501 aa3.61□□□□□ -1.83
PEX1YKL197C HPF1Q05164 967 aa3.61□□□□□ -1.83
PEX1YKL197C RSC58Q07979 502 aa3.61□□□□□ -1.83
PEX1YKL197C NOP12Q08208 459 aaKnown RBP3.61□□□□□ -1.83
PEX1YKL197C SPO16P17122 198 aa3.61□□□□□ -1.83
PEX1YKL197C PEP7P32609 515 aa3.61□□□□□ -1.83
PEX1YKL197C YKR018CP36114 725 aa3.61□□□□□ -1.83
PEX1YKL197C DYS1P38791 387 aa3.61□□□□□ -1.83
PEX1YKL197C AIM10P39965 576 aaKnown RBP3.61□□□□□ -1.83
PEX1YKL197C JEM1P40358 645 aa3.61□□□□□ -1.83
PEX1YKL197C SKP2P42843 763 aa3.61□□□□□ -1.83
PEX1YKL197C YFL034WP43564 1073 aa3.61□□□□□ -1.83
PEX1YKL197C HAM1P47119 197 aaKnown RBP3.61□□□□□ -1.83
PEX1YKL197C MNP1P53163 194 aaPredicted RBP3.61□□□□□ -1.83
PEX1YKL197C SFB2P53953 876 aa3.61□□□□□ -1.83
PEX1YKL197C GMC2Q06201 188 aa3.61□□□□□ -1.83
PEX1YKL197C PHO92Q06390 306 aa3.61□□□□□ -1.83
PEX1YKL197C ATG13Q06628 738 aa3.61□□□□□ -1.83
PEX1YKL197C NOP6Q07623 225 aaKnown RBP3.61□□□□□ -1.83
PEX1YKL197C NTG2Q08214 380 aa3.61□□□□□ -1.83
PEX1YKL197C SDH5Q08230 162 aa3.61□□□□□ -1.83
PEX1YKL197C PPM2Q08282 695 aa3.61□□□□□ -1.83
PEX1YKL197C RTT10Q08924 1013 aa3.61□□□□□ -1.83
PEX1YKL197C CDC53Q12018 815 aaKnown RBP3.61□□□□□ -1.83
PEX1YKL197C ATG29Q12092 213 aa3.61□□□□□ -1.83
PEX1YKL197C MET8P15807 274 aa3.61□□□□□ -1.83
PEX1YKL197C RRP43P25359 394 aaPredicted RBP3.61□□□□□ -1.83
PEX1YKL197C MSP1P28737 362 aa3.61□□□□□ -1.83
PEX1YKL197C MEI4P29467 408 aa3.61□□□□□ -1.83
PEX1YKL197C NTG1P31378 399 aa3.61□□□□□ -1.83
PEX1YKL197C ATP3P38077 311 aaKnown RBP3.61□□□□□ -1.83
PEX1YKL197C CHK1P38147 527 aa3.61□□□□□ -1.83
PEX1YKL197C SAW1P39735 261 aa3.61□□□□□ -1.83
PEX1YKL197C YIL166CP40445 542 aa3.61□□□□□ -1.83
PEX1YKL197C AGE2P40529 298 aa3.61□□□□□ -1.83
PEX1YKL197C SBE2P42223 864 aaKnown RBP3.61□□□□□ -1.83
PEX1YKL197C ALB1P47019 175 aaPredicted RBP3.61□□□□□ -1.83
PEX1YKL197C TRS130Q03660 1102 aa3.61□□□□□ -1.83
PEX1YKL197C TAF8Q03750 510 aa3.61□□□□□ -1.83
PEX1YKL197C INP2Q03824 705 aa3.61□□□□□ -1.83
PEX1YKL197C SGD1Q06132 899 aa3.61□□□□□ -1.83
PEX1YKL197C RGA2Q06407 1009 aa3.61□□□□□ -1.83
PEX1YKL197C YPL225WQ08971 146 aaKnown RBP3.61□□□□□ -1.83
PEX1YKL197C SMC6Q12749 1114 aa3.61□□□□□ -1.83
PEX1YKL197C EDE1P34216 1381 aa3.61□□□□□ -1.83
PEX1YKL197C STI1P15705 589 aaKnown RBP RIP-Chip data3.6□□□□□ -1.83not detected
PEX1YKL197C SSE1P32589 693 aaKnown RBP3.6□□□□□ -1.83
PEX1YKL197C AFR1P33304 620 aa3.6□□□□□ -1.83
PEX1YKL197C CUE2P36075 443 aaKnown RBP3.6□□□□□ -1.83
PEX1YKL197C KAP104P38217 918 aaKnown RBP3.6□□□□□ -1.83
PEX1YKL197C MSG5P38590 489 aa3.6□□□□□ -1.83
PEX1YKL197C CIT3P43635 486 aa3.6□□□□□ -1.83
PEX1YKL197C NIT3P49954 291 aa3.6□□□□□ -1.83
PEX1YKL197C STB4P50104 949 aa3.6□□□□□ -1.83
PEX1YKL197C ZIP2P53061 704 aa3.6□□□□□ -1.83
PEX1YKL197C UTP22P53254 1237 aaPredicted RBP3.6□□□□□ -1.83
PEX1YKL197C COG2P53271 262 aa3.6□□□□□ -1.83
PEX1YKL197C COP1P53622 1201 aaKnown RBP3.6□□□□□ -1.83
PEX1YKL197C SIW14P53965 281 aa3.6□□□□□ -1.83
PEX1YKL197C UTP14Q04500 899 aaKnown RBP3.6□□□□□ -1.83
PEX1YKL197C ARP10Q04549 284 aa3.6□□□□□ -1.83
PEX1YKL197C EIS1Q05050 843 aaKnown RBP3.6□□□□□ -1.83
PEX1YKL197C YLR346CQ06139 101 aa3.6□□□□□ -1.83
PEX1YKL197C MMR1Q06324 491 aa3.6□□□□□ -1.83
PEX1YKL197C YOR296WQ08748 1289 aa3.6□□□□□ -1.83
PEX1YKL197C LAP2Q10740 671 aa3.6□□□□□ -1.83
PEX1YKL197C Q0182Q9ZZW1 134 aa3.6□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 27.9 ms