RNA–Protein interactions for RNA: YKL165C

MCD4, Transcript of Protein involved in GPI anchor synthesis, yeast

Gene MCD4, Length 2,760 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MCD4	YKL165C	SUR1	P33300	382 aa		4.04	□□□□□ -1.76
MCD4	YKL165C	PHO11	P35842	467 aa		4.04	□□□□□ -1.76
MCD4	YKL165C	LAS1	P36146	502 aa	Predicted RBP	4.04	□□□□□ -1.76
MCD4	YKL165C	PHO12	P38693	467 aa		4.04	□□□□□ -1.76
MCD4	YKL165C	YHR054C	P38780	354 aa		4.04	□□□□□ -1.76
MCD4	YKL165C	VPS45	P38932	577 aa		4.04	□□□□□ -1.76
MCD4	YKL165C	SHC1	P39000	512 aa		4.04	□□□□□ -1.76
MCD4	YKL165C	YER156C	P40093	338 aa	Known RBP	4.04	□□□□□ -1.76
MCD4	YKL165C	CCT7	P42943	550 aa	Known RBP	4.04	□□□□□ -1.76
MCD4	YKL165C	MNN11	P46985	422 aa	Known RBP	4.04	□□□□□ -1.76
MCD4	YKL165C	SNF12	P53628	566 aa		4.04	□□□□□ -1.76
MCD4	YKL165C	MNT4	P53745	580 aa		4.04	□□□□□ -1.76
MCD4	YKL165C	YNR061C	P53747	219 aa		4.04	□□□□□ -1.76
MCD4	YKL165C	MOT3	P54785	490 aa	Known RBP	4.04	□□□□□ -1.76
MCD4	YKL165C	PEX25	Q02969	394 aa		4.04	□□□□□ -1.76
MCD4	YKL165C	YMR155W	Q03795	547 aa		4.04	□□□□□ -1.76
MCD4	YKL165C	IVY1	Q04934	453 aa		4.04	□□□□□ -1.76
MCD4	YKL165C	GMC2	Q06201	188 aa		4.04	□□□□□ -1.76
MCD4	YKL165C	YDL124W	Q07551	312 aa	Known RBP	4.04	□□□□□ -1.76
MCD4	YKL165C	TRE2	Q08693	809 aa		4.04	□□□□□ -1.76
MCD4	YKL165C	YOR296W	Q08748	1289 aa		4.04	□□□□□ -1.76
MCD4	YKL165C	TAH18	Q12181	623 aa		4.04	□□□□□ -1.76
MCD4	YKL165C	FUR4	P05316	633 aa	Known RBP	4.03	□□□□□ -1.76
MCD4	YKL165C	DBP2	P24783	546 aa	Known RBP	4.03	□□□□□ -1.76
MCD4	YKL165C	SUV3	P32580	737 aa		4.03	□□□□□ -1.76
MCD4	YKL165C	PRP40	P33203	583 aa	Known RBP	4.03	□□□□□ -1.76
MCD4	YKL165C	AFR1	P33304	620 aa		4.03	□□□□□ -1.76
MCD4	YKL165C	MDL1	P33310	695 aa		4.03	□□□□□ -1.76
MCD4	YKL165C	MSN4	P33749	630 aa		4.03	□□□□□ -1.76
MCD4	YKL165C	RAD55	P38953	406 aa		4.03	□□□□□ -1.76
MCD4	YKL165C	RVS167	P39743	482 aa	Known RBP	4.03	□□□□□ -1.76
MCD4	YKL165C	VHR1	P40522	640 aa		4.03	□□□□□ -1.76
MCD4	YKL165C	SAM37	P50110	327 aa		4.03	□□□□□ -1.76
MCD4	YKL165C	ACS2	P52910	683 aa	Known RBP	4.03	□□□□□ -1.76
MCD4	YKL165C	GCR2	Q01722	534 aa		4.03	□□□□□ -1.76
MCD4	YKL165C	FBP1	P09201	348 aa		4.03	□□□□□ -1.76
MCD4	YKL165C	DAL7	P21826	554 aa		4.03	□□□□□ -1.76
MCD4	YKL165C	CLB5	P30283	435 aa		4.03	□□□□□ -1.76
MCD4	YKL165C	VPS35	P34110	944 aa		4.03	□□□□□ -1.76
MCD4	YKL165C	YUH1	P35127	236 aa		4.03	□□□□□ -1.76
MCD4	YKL165C	PXL1	P36166	706 aa		4.03	□□□□□ -1.76
MCD4	YKL165C	TYS1	P36421	394 aa	Known RBP	4.03	□□□□□ -1.76
MCD4	YKL165C	ORC6	P38826	435 aa		4.03	□□□□□ -1.76
MCD4	YKL165C	NPR2	P39923	615 aa		4.03	□□□□□ -1.76
MCD4	YKL165C	MRX1	P40050	688 aa		4.03	□□□□□ -1.76
MCD4	YKL165C	CCT5	P40413	562 aa	Known RBP	4.03	□□□□□ -1.76
MCD4	YKL165C	ASE1	P50275	885 aa		4.03	□□□□□ -1.76
MCD4	YKL165C	LSC1	P53598	329 aa	Known RBP	4.03	□□□□□ -1.76
MCD4	YKL165C	CAF120	P53836	1060 aa		4.03	□□□□□ -1.76
MCD4	YKL165C	REG1	Q00816	1014 aa		4.03	□□□□□ -1.76
MCD4	YKL165C	FMP25	Q08023	583 aa		4.03	□□□□□ -1.76
MCD4	YKL165C	TGS1	Q12052	315 aa		4.03	□□□□□ -1.76
MCD4	YKL165C	ISU2	Q12056	156 aa		4.03	□□□□□ -1.76
MCD4	YKL165C	RPS9A	O13516	197 aa	Known RBP	4.02	□□□□□ -1.77
MCD4	YKL165C	RPS9B	P05755	195 aa	Known RBP	4.02	□□□□□ -1.77
MCD4	YKL165C	SRP54	P20424	541 aa	Known RBP	4.02	□□□□□ -1.77
MCD4	YKL165C	BAS1	P22035	811 aa		4.02	□□□□□ -1.77
MCD4	YKL165C	GYP6	P32806	458 aa		4.02	□□□□□ -1.77
MCD4	YKL165C	AMN1	P38285	549 aa	Predicted RBP	4.02	□□□□□ -1.77
MCD4	YKL165C	SAW1	P39735	261 aa		4.02	□□□□□ -1.77
MCD4	YKL165C	GCN20	P43535	752 aa	Known RBP	4.02	□□□□□ -1.77
MCD4	YKL165C	TOF1	P53840	1238 aa		4.02	□□□□□ -1.77
MCD4	YKL165C	RKM1	Q08961	583 aa	Predicted RBP	4.02	□□□□□ -1.77
MCD4	YKL165C	ATG29	Q12092	213 aa		4.02	□□□□□ -1.77
MCD4	YKL165C	SKS1	Q12505	502 aa		4.02	□□□□□ -1.77
MCD4	YKL165C	CET1	O13297	549 aa	Predicted RBP	4.02	□□□□□ -1.77
MCD4	YKL165C	TRK1	P12685	1235 aa		4.02	□□□□□ -1.77
MCD4	YKL165C	APE1	P14904	514 aa		4.02	□□□□□ -1.77
MCD4	YKL165C	ROX1	P25042	368 aa		4.02	□□□□□ -1.77
MCD4	YKL165C	CWH43	P25618	953 aa		4.02	□□□□□ -1.77
MCD4	YKL165C	DUN1	P39009	513 aa		4.02	□□□□□ -1.77
MCD4	YKL165C	ATG3	P40344	310 aa		4.02	□□□□□ -1.77
MCD4	YKL165C	YFL066C	P43538	392 aa		4.02	□□□□□ -1.77
MCD4	YKL165C	UBP15	P50101	1230 aa		4.02	□□□□□ -1.77
MCD4	YKL165C	MLC1	P53141	149 aa		4.02	□□□□□ -1.77
MCD4	YKL165C	UFD2	P54860	961 aa		4.02	□□□□□ -1.77
MCD4	YKL165C	ADE12	P80210	433 aa	Known RBP	4.02	□□□□□ -1.77
MCD4	YKL165C	EEB1	Q02891	456 aa		4.02	□□□□□ -1.77
MCD4	YKL165C	RTN1	Q04947	295 aa	Known RBP	4.02	□□□□□ -1.77
MCD4	YKL165C	FUS2	Q05670	677 aa		4.02	□□□□□ -1.77
MCD4	YKL165C	TFC6	Q06339	672 aa		4.02	□□□□□ -1.77
MCD4	YKL165C	SPE3	Q12074	293 aa	Known RBP	4.02	□□□□□ -1.77
MCD4	YKL165C	ADE2	P21264	571 aa	Known RBP	4.02	□□□□□ -1.77
MCD4	YKL165C	SMI1	P32566	505 aa		4.02	□□□□□ -1.77
MCD4	YKL165C	APM3	P38153	483 aa		4.02	□□□□□ -1.77
MCD4	YKL165C	PSY4	P38193	441 aa		4.02	□□□□□ -1.77
MCD4	YKL165C	GDH3	P39708	457 aa		4.02	□□□□□ -1.77
MCD4	YKL165C	SAM50	P53969	484 aa		4.02	□□□□□ -1.77
MCD4	YKL165C	KTR6	P54070	446 aa		4.02	□□□□□ -1.77
MCD4	YKL165C	CEG1	Q01159	459 aa	Predicted RBP	4.02	□□□□□ -1.77
MCD4	YKL165C	CDC73	Q06697	393 aa		4.02	□□□□□ -1.77
MCD4	YKL165C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.02	□□□□□ -1.77	not detected
MCD4	YKL165C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	4.02	□□□□□ -1.77	not detected
MCD4	YKL165C	PML1	Q07930	204 aa	Predicted RBP	4.02	□□□□□ -1.77
MCD4	YKL165C	MDY2	Q12285	212 aa		4.02	□□□□□ -1.77
MCD4	YKL165C	RTC1	Q08281	1341 aa		4.01	□□□□□ -1.77
MCD4	YKL165C	BI4	P03879	638 aa		4.01	□□□□□ -1.77
MCD4	YKL165C	RER1	P25560	188 aa		4.01	□□□□□ -1.77
MCD4	YKL165C	GPI10	P30777	616 aa		4.01	□□□□□ -1.77
MCD4	YKL165C	IRE1	P32361	1115 aa		4.01	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 55.9 ms