RNA–Protein interactions for RNA: YIR009W

MSL1, Transcript of U2B component of U2 snRNP, yeastyeast

Gene MSL1, Length 336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSL1YIR009W CDC9P04819 755 aa3.02□□□□□ -1.93
MSL1YIR009W RNR1P21524 888 aaKnown RBP3.02□□□□□ -1.93
MSL1YIR009W YKR051WP36142 418 aa3.02□□□□□ -1.93
MSL1YIR009W CRP1P38845 465 aaKnown RBP3.02□□□□□ -1.93
MSL1YIR009W RPN10P38886 268 aaKnown RBP3.02□□□□□ -1.93
MSL1YIR009W UBC9P50623 157 aaPredicted RBP3.02□□□□□ -1.93
MSL1YIR009W NPY1P53164 384 aa3.02□□□□□ -1.93
MSL1YIR009W REC102Q02721 264 aa3.02□□□□□ -1.93
MSL1YIR009W MRI1Q06489 411 aaKnown RBP3.02□□□□□ -1.93
MSL1YIR009W USV1Q12132 391 aa3.02□□□□□ -1.93
MSL1YIR009W ZRT2Q12436 422 aa3.02□□□□□ -1.93
MSL1YIR009W PEX1P24004 1043 aa3.01□□□□□ -1.93
MSL1YIR009W CCR4P31384 837 aaKnown RBP3.01□□□□□ -1.93
MSL1YIR009W YKR018CP36114 725 aa3.01□□□□□ -1.93
MSL1YIR009W SET3P36124 751 aa3.01□□□□□ -1.93
MSL1YIR009W NMD2P38798 1089 aaKnown RBP3.01□□□□□ -1.93
MSL1YIR009W PAC2P39937 518 aa3.01□□□□□ -1.93
MSL1YIR009W CLF1Q12309 687 aaPredicted RBP3.01□□□□□ -1.93
MSL1YIR009W YOR131CQ12486 218 aa3.01□□□□□ -1.93
MSL1YIR009W CIT2P08679 460 aa3□□□□□ -1.93
MSL1YIR009W FUB1P25659 250 aa3□□□□□ -1.93
MSL1YIR009W MUP3P38734 546 aa3□□□□□ -1.93
MSL1YIR009W NOP9P47077 666 aaKnown RBP3□□□□□ -1.93
MSL1YIR009W MRK1P50873 501 aa3□□□□□ -1.93
MSL1YIR009W PCL10P53124 433 aa3□□□□□ -1.93
MSL1YIR009W ARP4P80428 489 aa3□□□□□ -1.93
MSL1YIR009W NHX1Q04121 633 aa3□□□□□ -1.93
MSL1YIR009W RPN7Q06103 429 aaKnown RBP3□□□□□ -1.93
MSL1YIR009W ICT1Q12385 394 aa3□□□□□ -1.93
MSL1YIR009W VPS34P22543 875 aa2.99□□□□□ -1.93
MSL1YIR009W MEF1P25039 761 aa2.99□□□□□ -1.93
MSL1YIR009W HOG1P32485 435 aa2.99□□□□□ -1.93
MSL1YIR009W ORC2P32833 620 aa2.99□□□□□ -1.93
MSL1YIR009W SEC6P32844 805 aa2.99□□□□□ -1.93
MSL1YIR009W TIM23P32897 222 aa2.99□□□□□ -1.93
MSL1YIR009W RRP14P36080 434 aaKnown RBP2.99□□□□□ -1.93
MSL1YIR009W GMH1P36125 273 aa2.99□□□□□ -1.93
MSL1YIR009W PBP2P38151 413 aaKnown RBP RIP-Chip data2.99□□□□□ -1.93not detected
MSL1YIR009W HSL7P38274 827 aa2.99□□□□□ -1.93
MSL1YIR009W OSW7P43611 510 aa2.99□□□□□ -1.93
MSL1YIR009W LEE1Q02799 301 aaKnown RBP2.99□□□□□ -1.93
MSL1YIR009W RPN4Q03465 531 aa2.99□□□□□ -1.93
MSL1YIR009W THI22Q06490 572 aa2.99□□□□□ -1.93
MSL1YIR009W OSW1Q08692 278 aa2.99□□□□□ -1.93
MSL1YIR009W ECM3Q99252 613 aa2.99□□□□□ -1.93
MSL1YIR009W INO80P53115 1489 aa2.98□□□□□ -1.93
MSL1YIR009W GSY1P23337 708 aa2.98□□□□□ -1.93
MSL1YIR009W VBA3P25594 458 aa2.98□□□□□ -1.93
MSL1YIR009W TMT1P32643 299 aa2.98□□□□□ -1.93
MSL1YIR009W BCS1P32839 456 aa2.98□□□□□ -1.93
MSL1YIR009W BIT2P38346 545 aa2.98□□□□□ -1.93
MSL1YIR009W YNL195CP40168 261 aa2.98□□□□□ -1.93
MSL1YIR009W BUD6P41697 788 aa2.98□□□□□ -1.93
MSL1YIR009W RSC8P43609 557 aaKnown RBP2.98□□□□□ -1.93
MSL1YIR009W YGR151CP53287 111 aa2.98□□□□□ -1.93
MSL1YIR009W ALG12P53730 551 aa2.98□□□□□ -1.93
MSL1YIR009W DOS2P54858 310 aa2.98□□□□□ -1.93
MSL1YIR009W YAP7Q08182 245 aa2.98□□□□□ -1.93
MSL1YIR009W SRD1P09007 221 aa2.97□□□□□ -1.93
MSL1YIR009W HOM2P13663 365 aaKnown RBP2.97□□□□□ -1.93
MSL1YIR009W PRP28P23394 588 aa2.97□□□□□ -1.93
MSL1YIR009W TSR4P25040 408 aa2.97□□□□□ -1.93
MSL1YIR009W DSS1P39112 969 aa2.97□□□□□ -1.93
MSL1YIR009W SET2P46995 733 aaKnown RBP2.97□□□□□ -1.93
MSL1YIR009W COX18P53239 316 aa2.97□□□□□ -1.93
MSL1YIR009W RIM13Q03792 727 aa2.97□□□□□ -1.93
MSL1YIR009W DIA2Q08496 732 aaPredicted RBP2.97□□□□□ -1.93
MSL1YIR009W MON2P48563 1636 aaPredicted RBP2.97□□□□□ -1.93
MSL1YIR009W RAD18P10862 487 aa2.96□□□□□ -1.94
MSL1YIR009W KCC4P25389 1037 aa2.96□□□□□ -1.94
MSL1YIR009W YMC2P38087 329 aa2.96□□□□□ -1.94
MSL1YIR009W APN2P38207 520 aa2.96□□□□□ -1.94
MSL1YIR009W KSP1P38691 1029 aaKnown RBP2.96□□□□□ -1.94
MSL1YIR009W MIT1P40002 666 aa2.96□□□□□ -1.94
MSL1YIR009W PIG2P40187 538 aa2.96□□□□□ -1.94
MSL1YIR009W GLO1P50107 326 aa2.96□□□□□ -1.94
MSL1YIR009W BRE5P53741 515 aaKnown RBP2.96□□□□□ -1.94
MSL1YIR009W SEG1Q04279 960 aa2.96□□□□□ -1.94
MSL1YIR009W BMS1Q08965 1183 aaKnown RBP2.96□□□□□ -1.94
MSL1YIR009W CHS5Q12114 671 aaKnown RBP2.96□□□□□ -1.94
MSL1YIR009W FEN2P25621 512 aaKnown RBP2.95□□□□□ -1.94
MSL1YIR009W MSH2P25847 964 aa2.95□□□□□ -1.94
MSL1YIR009W MNN4P36044 1178 aa2.95□□□□□ -1.94
MSL1YIR009W SSZ1P38788 538 aaKnown RBP2.95□□□□□ -1.94
MSL1YIR009W YHR097CP38809 366 aaKnown RBP2.95□□□□□ -1.94
MSL1YIR009W FPR3P38911 411 aaKnown RBP2.95□□□□□ -1.94
MSL1YIR009W NUP82P40368 713 aa2.95□□□□□ -1.94
MSL1YIR009W MPS3P47069 682 aa2.95□□□□□ -1.94
MSL1YIR009W YJR008WP47085 338 aa2.95□□□□□ -1.94
MSL1YIR009W YDL086WQ07505 273 aa2.95□□□□□ -1.94
MSL1YIR009W SLK19Q08581 821 aaKnown RBP2.95□□□□□ -1.94
MSL1YIR009W PHO5P00635 467 aa2.94□□□□□ -1.94
MSL1YIR009W STE12P13574 688 aa2.94□□□□□ -1.94
MSL1YIR009W ABF1P14164 731 aa2.94□□□□□ -1.94
MSL1YIR009W AKL1P38080 1108 aaKnown RBP2.94□□□□□ -1.94
MSL1YIR009W CTP1P38152 299 aa2.94□□□□□ -1.94
MSL1YIR009W RFX1P48743 811 aa2.94□□□□□ -1.94
MSL1YIR009W SPC98P53540 846 aa2.94□□□□□ -1.94
MSL1YIR009W UGO1Q03327 502 aa2.94□□□□□ -1.94
MSL1YIR009W COG8Q04632 607 aa2.94□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 256.3 ms