RNA–Protein interactions for RNA: YIR001C

SGN1, Transcript of Cytoplasmic RNA-binding protein, yeast

Gene SGN1, Length 753 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SGN1	YIR001C	TOM70	P07213	617 aa	Known RBP	4.12	□□□□□ -1.75
SGN1	YIR001C	ATP1	P07251	545 aa	Known RBP	4.12	□□□□□ -1.75
SGN1	YIR001C	CIT2	P08679	460 aa		4.12	□□□□□ -1.75
SGN1	YIR001C	GLN3	P18494	730 aa		4.12	□□□□□ -1.75
SGN1	YIR001C	DBP5	P20449	482 aa	Known RBP	4.12	□□□□□ -1.75
SGN1	YIR001C	RSC6	P25632	483 aa		4.12	□□□□□ -1.75
SGN1	YIR001C	DPH2	P32461	534 aa		4.12	□□□□□ -1.75
SGN1	YIR001C	VPH1	P32563	840 aa	Known RBP	4.12	□□□□□ -1.75
SGN1	YIR001C	COT1	P32798	439 aa		4.12	□□□□□ -1.75
SGN1	YIR001C	HEL1	P36113	551 aa		4.12	□□□□□ -1.75
SGN1	YIR001C	MRX3	P38172	270 aa		4.12	□□□□□ -1.75
SGN1	YIR001C	RIM4	P38741	713 aa		4.12	□□□□□ -1.75
SGN1	YIR001C	ULP2	P40537	1034 aa	Predicted RBP	4.12	□□□□□ -1.75
SGN1	YIR001C	AVT1	P47082	602 aa		4.12	□□□□□ -1.75
SGN1	YIR001C	RTT102	P53330	157 aa		4.12	□□□□□ -1.75
SGN1	YIR001C	HXT17	P53631	564 aa		4.12	□□□□□ -1.75
SGN1	YIR001C	PGA2	P53903	129 aa		4.12	□□□□□ -1.75
SGN1	YIR001C	YNL011C	P53980	444 aa		4.12	□□□□□ -1.75
SGN1	YIR001C	CDC55	Q00362	526 aa		4.12	□□□□□ -1.75
SGN1	YIR001C	NSE1	Q07913	336 aa		4.12	□□□□□ -1.75
SGN1	YIR001C	SMC6	Q12749	1114 aa		4.12	□□□□□ -1.75
SGN1	YIR001C	YBL113C	Q7M4S9	792 aa		4.12	□□□□□ -1.75
SGN1	YIR001C	TUF1	P02992	437 aa	Known RBP	4.11	□□□□□ -1.75
SGN1	YIR001C	HIS5	P07172	385 aa		4.11	□□□□□ -1.75
SGN1	YIR001C	TCP1	P12612	559 aa	Known RBP	4.11	□□□□□ -1.75
SGN1	YIR001C	PDE1	P22434	369 aa		4.11	□□□□□ -1.75
SGN1	YIR001C	PRP22	P24384	1145 aa	Known RBP	4.11	□□□□□ -1.75
SGN1	YIR001C	PEX34	P25584	144 aa		4.11	□□□□□ -1.75
SGN1	YIR001C	PYC2	P32327	1180 aa	Known RBP	4.11	□□□□□ -1.75
SGN1	YIR001C	VPS35	P34110	944 aa		4.11	□□□□□ -1.75
SGN1	YIR001C	ECM2	P38241	364 aa	Known RBP	4.11	□□□□□ -1.75
SGN1	YIR001C	VID24	P38263	362 aa		4.11	□□□□□ -1.75
SGN1	YIR001C	AMN1	P38285	549 aa	Predicted RBP	4.11	□□□□□ -1.75
SGN1	YIR001C	ERP5	P38819	212 aa		4.11	□□□□□ -1.75
SGN1	YIR001C	FMO1	P38866	432 aa		4.11	□□□□□ -1.75
SGN1	YIR001C	RPN10	P38886	268 aa	Known RBP	4.11	□□□□□ -1.75
SGN1	YIR001C	TED1	P40533	473 aa		4.11	□□□□□ -1.75
SGN1	YIR001C	PRY1	P47032	299 aa		4.11	□□□□□ -1.75
SGN1	YIR001C	YGR130C	P53278	816 aa		4.11	□□□□□ -1.75
SGN1	YIR001C	SDA1	P53313	767 aa	Known RBP	4.11	□□□□□ -1.75
SGN1	YIR001C	NCS2	P53923	493 aa	Predicted RBP	4.11	□□□□□ -1.75
SGN1	YIR001C	SFB2	P53953	876 aa		4.11	□□□□□ -1.75
SGN1	YIR001C	ALG11	P53954	548 aa	Known RBP	4.11	□□□□□ -1.75
SGN1	YIR001C	LEE1	Q02799	301 aa	Known RBP	4.11	□□□□□ -1.75
SGN1	YIR001C	CWC21	Q03375	135 aa	Known RBP	4.11	□□□□□ -1.75
SGN1	YIR001C	RCR2	Q03446	210 aa	Known RBP	4.11	□□□□□ -1.75
SGN1	YIR001C	NSE5	Q03718	556 aa		4.11	□□□□□ -1.75
SGN1	YIR001C	PEX19	Q07418	342 aa		4.11	□□□□□ -1.75
SGN1	YIR001C	DNL4	Q08387	944 aa	Predicted RBP	4.11	□□□□□ -1.75
SGN1	YIR001C	IES4	Q08561	116 aa		4.11	□□□□□ -1.75
SGN1	YIR001C	NBL1	Q3E7Y6	73 aa		4.11	□□□□□ -1.75
SGN1	YIR001C	RPS9A	O13516	197 aa	Known RBP	4.1	□□□□□ -1.75
SGN1	YIR001C	HXK1	P04806	485 aa	Known RBP	4.1	□□□□□ -1.75
SGN1	YIR001C	RPL40A	P0CH08	128 aa	Known RBP	4.1	□□□□□ -1.75
SGN1	YIR001C	RPL40B	P0CH09	128 aa	Known RBP	4.1	□□□□□ -1.75
SGN1	YIR001C	FRS2	P15625	503 aa	Known RBP	4.1	□□□□□ -1.75
SGN1	YIR001C	PGS1	P25578	521 aa		4.1	□□□□□ -1.75
SGN1	YIR001C	RPT1	P33299	467 aa	Known RBP	4.1	□□□□□ -1.75
SGN1	YIR001C	TFA2	P36145	328 aa		4.1	□□□□□ -1.75
SGN1	YIR001C	HMT1	P38074	348 aa		4.1	□□□□□ -1.75
SGN1	YIR001C	RGD1	P38339	666 aa		4.1	□□□□□ -1.75
SGN1	YIR001C	STT3	P39007	718 aa	Known RBP	4.1	□□□□□ -1.75
SGN1	YIR001C	HXT13	P39924	564 aa		4.1	□□□□□ -1.75
SGN1	YIR001C	YER186C	P40101	306 aa		4.1	□□□□□ -1.75
SGN1	YIR001C	LSB6	P42951	607 aa		4.1	□□□□□ -1.75
SGN1	YIR001C	FAA4	P47912	694 aa	Known RBP	4.1	□□□□□ -1.75
SGN1	YIR001C	STB4	P50104	949 aa		4.1	□□□□□ -1.75
SGN1	YIR001C	MNP1	P53163	194 aa	Predicted RBP	4.1	□□□□□ -1.75
SGN1	YIR001C	TAM41	P53230	385 aa		4.1	□□□□□ -1.75
SGN1	YIR001C	YNL146W	P53906	100 aa		4.1	□□□□□ -1.75
SGN1	YIR001C	MSH6	Q03834	1242 aa		4.1	□□□□□ -1.75
SGN1	YIR001C	YML053C	Q04978	212 aa		4.1	□□□□□ -1.75
SGN1	YIR001C	BSC2	Q05611	235 aa		4.1	□□□□□ -1.75
SGN1	YIR001C	TIP41	Q12199	356 aa		4.1	□□□□□ -1.75
SGN1	YIR001C	GLO4	Q12320	285 aa		4.1	□□□□□ -1.75
SGN1	YIR001C	OSH2	Q12451	1283 aa		4.1	□□□□□ -1.75
SGN1	YIR001C	ZPS1	Q12512	249 aa		4.1	□□□□□ -1.75
SGN1	YIR001C	HSP82	P02829	709 aa	Known RBP	4.09	□□□□□ -1.75
SGN1	YIR001C	RPS14A	P06367	137 aa	Known RBP	4.09	□□□□□ -1.75
SGN1	YIR001C	CUP1-1	P0CX80	61 aa		4.09	□□□□□ -1.75
SGN1	YIR001C	CUP1-2	P0CX81	61 aa		4.09	□□□□□ -1.75
SGN1	YIR001C	TAF13	P11747	167 aa		4.09	□□□□□ -1.75
SGN1	YIR001C	HOM2	P13663	365 aa	Known RBP	4.09	□□□□□ -1.75
SGN1	YIR001C	VPS1	P21576	704 aa	Known RBP	4.09	□□□□□ -1.75
SGN1	YIR001C	ASF1	P32447	279 aa		4.09	□□□□□ -1.75
SGN1	YIR001C	MAE1	P36013	669 aa	Known RBP	4.09	□□□□□ -1.75
SGN1	YIR001C	KTR4	P38131	464 aa		4.09	□□□□□ -1.75
SGN1	YIR001C	ERC1	P38767	581 aa		4.09	□□□□□ -1.75
SGN1	YIR001C	RPS14B	P39516	138 aa	Known RBP	4.09	□□□□□ -1.75
SGN1	YIR001C	SIP5	P40210	489 aa	Known RBP	4.09	□□□□□ -1.75
SGN1	YIR001C	MDJ2	P42834	146 aa		4.09	□□□□□ -1.75
SGN1	YIR001C	BFA1	P47113	574 aa		4.09	□□□□□ -1.75
SGN1	YIR001C	YJR124C	P47159	448 aa		4.09	□□□□□ -1.75
SGN1	YIR001C	CUL3	P53202	744 aa		4.09	□□□□□ -1.75
SGN1	YIR001C	FAR11	P53917	953 aa		4.09	□□□□□ -1.75
SGN1	YIR001C	EEB1	Q02891	456 aa		4.09	□□□□□ -1.75
SGN1	YIR001C	YHM2	Q04013	314 aa		4.09	□□□□□ -1.75
SGN1	YIR001C	ECM7	Q06200	448 aa		4.09	□□□□□ -1.75
SGN1	YIR001C	YLL054C	Q12244	843 aa		4.09	□□□□□ -1.75
SGN1	YIR001C	TY1A-NL1	Q12391	440 aa	Known RBP	4.09	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms