RNA–Protein interactions for RNA: YGR048W

UFD1, Transcript of Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase, yeastyeast

Gene UFD1, Length 1,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD1YGR048W SMY1P32364 656 aaKnown RBP8.41□□□□□ -1.06
UFD1YGR048W YME1P32795 747 aa8.41□□□□□ -1.06
UFD1YGR048W SSO1P32867 290 aa8.41□□□□□ -1.06
UFD1YGR048W YKR078WP36158 585 aaKnown RBP8.41□□□□□ -1.06
UFD1YGR048W TYS1P36421 394 aaKnown RBP8.41□□□□□ -1.06
UFD1YGR048W MRX3P38172 270 aa8.41□□□□□ -1.06
UFD1YGR048W UBP12P39538 1254 aa8.41□□□□□ -1.06
UFD1YGR048W PHB1P40961 287 aa8.41□□□□□ -1.06
UFD1YGR048W FIG4P42837 879 aa8.41□□□□□ -1.06
UFD1YGR048W YJR115WP47152 169 aa8.41□□□□□ -1.06
UFD1YGR048W MRM2P53123 320 aa8.41□□□□□ -1.06
UFD1YGR048W PIB2P53191 635 aa8.41□□□□□ -1.06
UFD1YGR048W PTA1Q01329 785 aaPredicted RBP8.41□□□□□ -1.06
UFD1YGR048W FMP42Q04991 504 aa8.41□□□□□ -1.06
UFD1YGR048W COA4Q05809 96 aa8.41□□□□□ -1.06
UFD1YGR048W MDM20Q12387 796 aaKnown RBP8.41□□□□□ -1.06
UFD1YGR048W ADR1P07248 1323 aa8.4□□□□□ -1.06
UFD1YGR048W PDE2P06776 526 aa8.4□□□□□ -1.06
UFD1YGR048W GAR1P28007 205 aaKnown RBP8.4□□□□□ -1.06
UFD1YGR048W PEP7P32609 515 aa8.4□□□□□ -1.06
UFD1YGR048W VPS21P36017 210 aaKnown RBP8.4□□□□□ -1.06
UFD1YGR048W PGM2P37012 569 aaKnown RBP8.4□□□□□ -1.06
UFD1YGR048W YRO2P38079 344 aa8.4□□□□□ -1.06
UFD1YGR048W ERP5P38819 212 aa8.4□□□□□ -1.06
UFD1YGR048W NPT1P39683 429 aaKnown RBP8.4□□□□□ -1.06
UFD1YGR048W AST2P39945 430 aaKnown RBP8.4□□□□□ -1.06
UFD1YGR048W RIC1P40395 1056 aa8.4□□□□□ -1.06
UFD1YGR048W EPL1P43572 832 aa8.4□□□□□ -1.06
UFD1YGR048W SPC105P53148 917 aa8.4□□□□□ -1.06
UFD1YGR048W BNI5P53890 448 aaKnown RBP8.4□□□□□ -1.06
UFD1YGR048W ULP1Q02724 621 aa8.4□□□□□ -1.06
UFD1YGR048W MMT1Q03218 510 aa8.4□□□□□ -1.06
UFD1YGR048W SMC5Q08204 1093 aa8.4□□□□□ -1.06
UFD1YGR048W TIP41Q12199 356 aa8.4□□□□□ -1.06
UFD1YGR048W SEM1O94742 89 aa8.39□□□□□ -1.07
UFD1YGR048W TEC1P18412 486 aa8.39□□□□□ -1.07
UFD1YGR048W PHO3P24031 467 aa8.39□□□□□ -1.07
UFD1YGR048W MGM1P32266 881 aa8.39□□□□□ -1.07
UFD1YGR048W TPO5P36029 618 aa8.39□□□□□ -1.07
UFD1YGR048W YHL012WP38709 493 aa8.39□□□□□ -1.07
UFD1YGR048W EMW1P42842 904 aaKnown RBP8.39□□□□□ -1.07
UFD1YGR048W IES1P43579 692 aa8.39□□□□□ -1.07
UFD1YGR048W YJL055WP47044 245 aa8.39□□□□□ -1.07
UFD1YGR048W RNR4P49723 345 aaKnown RBP8.39□□□□□ -1.07
UFD1YGR048W MON1P53129 644 aa8.39□□□□□ -1.07
UFD1YGR048W ALD6P54115 500 aaKnown RBP8.39□□□□□ -1.07
UFD1YGR048W HPC2Q01448 625 aa8.39□□□□□ -1.07
UFD1YGR048W HEL2Q05580 639 aaKnown RBP8.39□□□□□ -1.07
UFD1YGR048W DCS1Q06151 350 aa8.39□□□□□ -1.07
UFD1YGR048W ESF1Q06344 628 aaKnown RBP8.39□□□□□ -1.07
UFD1YGR048W YDL114WQ07530 308 aa8.39□□□□□ -1.07
UFD1YGR048W SOG2Q08817 791 aa8.39□□□□□ -1.07
UFD1YGR048W SSK22P25390 1331 aaPredicted RBP8.38□□□□□ -1.07
UFD1YGR048W MPH2P0CD99 609 aa8.38□□□□□ -1.07
UFD1YGR048W POL30P15873 258 aaKnown RBP8.38□□□□□ -1.07
UFD1YGR048W KGD2P19262 463 aaPredicted RBP8.38□□□□□ -1.07
UFD1YGR048W PRP9P19736 530 aaKnown RBP8.38□□□□□ -1.07
UFD1YGR048W SSA4P22202 642 aaKnown RBP8.38□□□□□ -1.07
UFD1YGR048W MSM1P22438 575 aa8.38□□□□□ -1.07
UFD1YGR048W MCM3P24279 971 aaKnown RBP8.38□□□□□ -1.07
UFD1YGR048W FRD1P32614 470 aaKnown RBP8.38□□□□□ -1.07
UFD1YGR048W MRPL40P36534 297 aa8.38□□□□□ -1.07
UFD1YGR048W MNN2P38069 597 aa8.38□□□□□ -1.07
UFD1YGR048W RFC3P38629 340 aa8.38□□□□□ -1.07
UFD1YGR048W DLD3P39976 496 aaKnown RBP8.38□□□□□ -1.07
UFD1YGR048W ULP2P40537 1034 aaPredicted RBP8.38□□□□□ -1.07
UFD1YGR048W RLP7P40693 322 aaKnown RBP8.38□□□□□ -1.07
UFD1YGR048W VMA10P48836 114 aaKnown RBP8.38□□□□□ -1.07
UFD1YGR048W ATP22P50273 684 aaPredicted RBP8.38□□□□□ -1.07
UFD1YGR048W UBA2P52488 636 aa8.38□□□□□ -1.07
UFD1YGR048W TOF1P53840 1238 aa8.38□□□□□ -1.07
UFD1YGR048W UBP2Q01476 1272 aa8.38□□□□□ -1.07
UFD1YGR048W VPS64Q03944 604 aa8.38□□□□□ -1.07
UFD1YGR048W NSE3Q05541 303 aa8.38□□□□□ -1.07
UFD1YGR048W YDL073WQ07454 984 aa8.38□□□□□ -1.07
UFD1YGR048W SIL1Q08199 421 aa8.38□□□□□ -1.07
UFD1YGR048W ZRT2Q12436 422 aa8.38□□□□□ -1.07
UFD1YGR048W TRM11Q12463 433 aa8.38□□□□□ -1.07
UFD1YGR048W MAK16P10962 306 aaPredicted RBP8.37□□□□□ -1.07
UFD1YGR048W POL3P15436 1097 aa8.37□□□□□ -1.07
UFD1YGR048W PKC1P24583 1151 aa8.37□□□□□ -1.07
UFD1YGR048W PHO84P25297 587 aaKnown RBP8.37□□□□□ -1.07
UFD1YGR048W GYP6P32806 458 aa8.37□□□□□ -1.07
UFD1YGR048W TRZ1P36159 838 aaPredicted RBP8.37□□□□□ -1.07
UFD1YGR048W IPL1P38991 367 aa8.37□□□□□ -1.07
UFD1YGR048W GCD10P41814 478 aa8.37□□□□□ -1.07
UFD1YGR048W SWP82P43554 623 aa8.37□□□□□ -1.07
UFD1YGR048W ALG2P43636 503 aa8.37□□□□□ -1.07
UFD1YGR048W AIP1P46680 615 aaKnown RBP8.37□□□□□ -1.07
UFD1YGR048W SNX4P47057 423 aa8.37□□□□□ -1.07
UFD1YGR048W RPC17P47076 161 aa8.37□□□□□ -1.07
UFD1YGR048W RBG2P53295 368 aaKnown RBP8.37□□□□□ -1.07
UFD1YGR048W CPR6P53691 371 aaKnown RBP8.37□□□□□ -1.07
UFD1YGR048W GPI17Q04080 534 aa8.37□□□□□ -1.07
UFD1YGR048W PNP1Q05788 311 aa8.37□□□□□ -1.07
UFD1YGR048W PCL8Q08966 492 aa8.37□□□□□ -1.07
UFD1YGR048W CLN3P13365 580 aa8.36□□□□□ -1.07
UFD1YGR048W PRP6P19735 899 aaPredicted RBP8.36□□□□□ -1.07
UFD1YGR048W YAP1P19880 650 aaKnown RBP8.36□□□□□ -1.07
UFD1YGR048W IMP2'P32351 346 aa8.36□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 30.6 ms