RNA–Protein interactions for RNA: YDR392W

SPT3, Transcript of Subunit of the SAGA and SAGA-like transcriptional regulatory complexes, yeastyeast

Gene SPT3, Length 1,014 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT3YDR392W TPP1Q03796 238 aa5.81□□□□□ -1.48
SPT3YDR392W MRI1Q06489 411 aaKnown RBP5.81□□□□□ -1.48
SPT3YDR392W YOL057WQ08225 711 aa5.81□□□□□ -1.48
SPT3YDR392W HSE1P38753 452 aa5.8□□□□□ -1.48
SPT3YDR392W ERP5P38819 212 aa5.8□□□□□ -1.48
SPT3YDR392W YHR202WP38887 602 aa5.8□□□□□ -1.48
SPT3YDR392W YAR028WP39548 234 aa5.8□□□□□ -1.48
SPT3YDR392W ORC1P54784 914 aaPredicted RBP5.8□□□□□ -1.48
SPT3YDR392W BMS1Q08965 1183 aaKnown RBP5.8□□□□□ -1.48
SPT3YDR392W PDH1Q12428 516 aaKnown RBP5.8□□□□□ -1.48
SPT3YDR392W IPP1P00817 287 aaKnown RBP5.79□□□□□ -1.48
SPT3YDR392W NEM1P38757 446 aa5.79□□□□□ -1.48
SPT3YDR392W CIC1P38779 376 aaKnown RBP5.79□□□□□ -1.48
SPT3YDR392W MED6P38782 295 aa5.79□□□□□ -1.48
SPT3YDR392W MRPL22P53881 309 aa5.79□□□□□ -1.48
SPT3YDR392W MDM1Q01846 1127 aa5.79□□□□□ -1.48
SPT3YDR392W GPI13Q07830 1017 aa5.79□□□□□ -1.48
SPT3YDR392W PEX34P25584 144 aa5.78□□□□□ -1.48
SPT3YDR392W GCS1P35197 352 aa5.78□□□□□ -1.48
SPT3YDR392W NUT2Q06213 157 aa5.78□□□□□ -1.48
SPT3YDR392W VIP1Q06685 1146 aaKnown RBP5.78□□□□□ -1.48
SPT3YDR392W YPL066WQ12194 479 aa5.78□□□□□ -1.48
SPT3YDR392W YBL113CQ7M4S9 792 aa5.78□□□□□ -1.48
SPT3YDR392W ATG14P38270 344 aa5.77□□□□□ -1.49
SPT3YDR392W RIM8P53179 542 aa5.77□□□□□ -1.49
SPT3YDR392W GDE1Q02979 1223 aa5.77□□□□□ -1.49
SPT3YDR392W RTK1Q12100 620 aaPredicted RBP5.77□□□□□ -1.49
SPT3YDR392W FRT1Q99332 602 aa5.77□□□□□ -1.49
SPT3YDR392W KIN82P25341 720 aa5.76□□□□□ -1.49
SPT3YDR392W AIM3P38266 947 aaKnown RBP5.76□□□□□ -1.49
SPT3YDR392W YHL012WP38709 493 aa5.76□□□□□ -1.49
SPT3YDR392W SUR7P54003 302 aa5.76□□□□□ -1.49
SPT3YDR392W UTP5Q04177 643 aaKnown RBP5.76□□□□□ -1.49
SPT3YDR392W SKG3Q06315 1026 aa5.76□□□□□ -1.49
SPT3YDR392W THI22Q06490 572 aa5.76□□□□□ -1.49
SPT3YDR392W HRK1Q08732 759 aaKnown RBP5.76□□□□□ -1.49
SPT3YDR392W YIL046W-AQ3E7Z4 54 aa5.76□□□□□ -1.49
SPT3YDR392W SAM35P14693 329 aa5.75□□□□□ -1.49
SPT3YDR392W VMA4P22203 233 aaKnown RBP5.75□□□□□ -1.49
SPT3YDR392W MUK1Q02866 612 aa5.75□□□□□ -1.49
SPT3YDR392W YOR097CQ12274 175 aaPredicted RBP5.75□□□□□ -1.49
SPT3YDR392W PFK1P16861 987 aaKnown RBP5.74□□□□□ -1.49
SPT3YDR392W SEC18P18759 758 aaKnown RBP5.74□□□□□ -1.49
SPT3YDR392W MSH3P25336 1018 aa5.74□□□□□ -1.49
SPT3YDR392W ALT2P52892 507 aa5.74□□□□□ -1.49
SPT3YDR392W IMP4P53941 290 aaKnown RBP5.74□□□□□ -1.49
SPT3YDR392W HOS3Q02959 697 aaKnown RBP5.74□□□□□ -1.49
SPT3YDR392W RSA3Q05942 220 aaKnown RBP5.74□□□□□ -1.49
SPT3YDR392W HDA2Q06629 674 aa5.74□□□□□ -1.49
SPT3YDR392W YDL177CQ12257 170 aa5.74□□□□□ -1.49
SPT3YDR392W RKM4Q12504 494 aa5.74□□□□□ -1.49
SPT3YDR392W SRO9P25567 434 aaKnown RBP5.73□□□□□ -1.49
SPT3YDR392W RAD27P26793 382 aa5.73□□□□□ -1.49
SPT3YDR392W CCL1P37366 393 aa5.73□□□□□ -1.49
SPT3YDR392W SNO2P53823 222 aa5.73□□□□□ -1.49
SPT3YDR392W PEX13P80667 386 aa5.73□□□□□ -1.49
SPT3YDR392W TY1B-AO13527 1196 aaKnown RBP5.72□□□□□ -1.49
SPT3YDR392W SOD2P00447 233 aa5.72□□□□□ -1.49
SPT3YDR392W GCD6P32501 712 aaKnown RBP5.72□□□□□ -1.49
SPT3YDR392W VPS35P34110 944 aa5.72□□□□□ -1.49
SPT3YDR392W GEF1P37020 779 aa5.72□□□□□ -1.49
SPT3YDR392W MAM1P40065 302 aa5.72□□□□□ -1.49
SPT3YDR392W YHL026CP38740 315 aa5.71□□□□□ -1.5
SPT3YDR392W UBX6P47049 396 aa5.71□□□□□ -1.5
SPT3YDR392W YDR306CQ06640 478 aa5.71□□□□□ -1.5
SPT3YDR392W CYB2P00175 591 aa5.7□□□□□ -1.5
SPT3YDR392W SAM2P19358 384 aaKnown RBP5.7□□□□□ -1.5
SPT3YDR392W SQT1P35184 431 aa5.7□□□□□ -1.5
SPT3YDR392W NMA2P53204 395 aa5.7□□□□□ -1.5
SPT3YDR392W YNL134CP53912 376 aaKnown RBP5.7□□□□□ -1.5
SPT3YDR392W RKM2Q03942 479 aa5.7□□□□□ -1.5
SPT3YDR392W YPL260WQ08977 551 aa5.7□□□□□ -1.5
SPT3YDR392W RRI2Q12348 645 aa5.7□□□□□ -1.5
SPT3YDR392W PIF1P07271 859 aa5.69□□□□□ -1.5
SPT3YDR392W TOD6P34219 525 aa5.69□□□□□ -1.5
SPT3YDR392W QNS1P38795 714 aaKnown RBP5.69□□□□□ -1.5
SPT3YDR392W PSP2P50109 593 aaKnown RBP5.69□□□□□ -1.5
SPT3YDR392W FMP25Q08023 583 aa5.69□□□□□ -1.5
SPT3YDR392W NBA1Q08229 501 aaKnown RBP5.69□□□□□ -1.5
SPT3YDR392W YPL277CQ08989 487 aa5.69□□□□□ -1.5
SPT3YDR392W RPS13P05756 151 aaKnown RBP5.68□□□□□ -1.5
SPT3YDR392W SCP160P06105 1222 aaKnown RBP RIP-Chip data5.68□□□□□ -1.5not detected
SPT3YDR392W GPI10P30777 616 aa5.68□□□□□ -1.5
SPT3YDR392W AIM26P32858 118 aa5.68□□□□□ -1.5
SPT3YDR392W ADD66P36040 267 aa5.68□□□□□ -1.5
SPT3YDR392W YNR063WP53749 607 aa5.68□□□□□ -1.5
SPT3YDR392W UBP3Q01477 912 aaKnown RBP RIP-Chip data5.68□□□□□ -1.5not detected
SPT3YDR392W SRX1P36077 127 aa5.67□□□□□ -1.5
SPT3YDR392W DID4P36108 232 aa5.67□□□□□ -1.5
SPT3YDR392W IML2P47031 731 aa5.67□□□□□ -1.5
SPT3YDR392W BFA1P47113 574 aa5.67□□□□□ -1.5
SPT3YDR392W YGL036WP53185 909 aaPredicted RBP5.67□□□□□ -1.5
SPT3YDR392W DAL4Q04895 635 aa5.67□□□□□ -1.5
SPT3YDR392W YLR358CO13565 187 aa5.66□□□□□ -1.5
SPT3YDR392W PHO4P07270 312 aaKnown RBP5.66□□□□□ -1.5
SPT3YDR392W SIR1P21691 654 aa5.66□□□□□ -1.5
SPT3YDR392W CHS3P29465 1165 aa5.66□□□□□ -1.5
SPT3YDR392W YSC84P32793 468 aa5.66□□□□□ -1.5
SPT3YDR392W SAP190P36123 1033 aa5.66□□□□□ -1.5
SPT3YDR392W CHS6P40955 746 aa5.66□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 119.4 ms