RNA–Protein interactions for RNA: YDR335W

MSN5, Transcript of Karyopherin, yeastyeast

Gene MSN5, Length 3,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN5YDR335W RPC40P07703 335 aaKnown RBP1.54□□□□□ -2.16
MSN5YDR335W MRP7P12687 371 aa1.54□□□□□ -2.16
MSN5YDR335W EST1P17214 699 aaPredicted RBP1.54□□□□□ -2.16
MSN5YDR335W RFA1P22336 621 aaKnown RBP1.54□□□□□ -2.16
MSN5YDR335W SEC65P29478 273 aa1.54□□□□□ -2.16
MSN5YDR335W SMI1P32566 505 aa1.54□□□□□ -2.16
MSN5YDR335W CNS1P33313 385 aa1.54□□□□□ -2.16
MSN5YDR335W SER1P33330 395 aaKnown RBP1.54□□□□□ -2.16
MSN5YDR335W KTR3P38130 404 aaPredicted RBP1.54□□□□□ -2.16
MSN5YDR335W GPB2P39717 880 aa1.54□□□□□ -2.16
MSN5YDR335W YEL025CP39991 1188 aa1.54□□□□□ -2.16
MSN5YDR335W YIL092WP40497 633 aa1.54□□□□□ -2.16
MSN5YDR335W CEP3P40969 608 aa1.54□□□□□ -2.16
MSN5YDR335W QRI7P43122 407 aa1.54□□□□□ -2.16
MSN5YDR335W ASK10P48361 1146 aa1.54□□□□□ -2.16
MSN5YDR335W GIS4Q04233 774 aa1.54□□□□□ -2.16
MSN5YDR335W TDA9Q04545 1251 aa1.54□□□□□ -2.16
MSN5YDR335W MFB1Q04922 465 aa1.54□□□□□ -2.16
MSN5YDR335W UTP4Q06679 776 aaKnown RBP1.54□□□□□ -2.16
MSN5YDR335W MDM38Q08179 573 aa1.54□□□□□ -2.16
MSN5YDR335W MET7Q08645 548 aa1.54□□□□□ -2.16
MSN5YDR335W GUP2Q08929 609 aa1.54□□□□□ -2.16
MSN5YDR335W LYS21Q12122 440 aaKnown RBP1.54□□□□□ -2.16
MSN5YDR335W RRP6Q12149 733 aaKnown RBP1.54□□□□□ -2.16
MSN5YDR335W YPL066WQ12194 479 aa1.54□□□□□ -2.16
MSN5YDR335W NFI1Q12216 726 aa1.54□□□□□ -2.16
MSN5YDR335W SPO16P17122 198 aa1.54□□□□□ -2.16
MSN5YDR335W STO1P34160 861 aaKnown RBP1.54□□□□□ -2.16
MSN5YDR335W KAE1P36132 386 aa1.54□□□□□ -2.16
MSN5YDR335W REI1P38344 393 aaPredicted RBP1.54□□□□□ -2.16
MSN5YDR335W NEM1P38757 446 aa1.54□□□□□ -2.16
MSN5YDR335W APE4P38821 490 aa1.54□□□□□ -2.16
MSN5YDR335W SHU2P38957 223 aa1.54□□□□□ -2.16
MSN5YDR335W SRB7P47822 140 aa1.54□□□□□ -2.16
MSN5YDR335W RNR4P49723 345 aaKnown RBP1.54□□□□□ -2.16
MSN5YDR335W NCS6P53088 359 aa1.54□□□□□ -2.16
MSN5YDR335W YGL140CP53120 1219 aa1.54□□□□□ -2.16
MSN5YDR335W NPY1P53164 384 aa1.54□□□□□ -2.16
MSN5YDR335W CWC22P53333 577 aaKnown RBP1.54□□□□□ -2.16
MSN5YDR335W DOT1Q04089 582 aaKnown RBP1.54□□□□□ -2.16
MSN5YDR335W SHE9Q04172 456 aa1.54□□□□□ -2.16
MSN5YDR335W YKU80Q04437 629 aa1.54□□□□□ -2.16
MSN5YDR335W EIS1Q05050 843 aaKnown RBP1.54□□□□□ -2.16
MSN5YDR335W YDR215CQ12240 137 aa1.54□□□□□ -2.16
MSN5YDR335W HOM2P13663 365 aaKnown RBP1.53□□□□□ -2.16
MSN5YDR335W GUK1P15454 187 aaKnown RBP1.53□□□□□ -2.16
MSN5YDR335W GRR1P24814 1151 aa1.53□□□□□ -2.16
MSN5YDR335W AAD3P25612 363 aa1.53□□□□□ -2.16
MSN5YDR335W SCT1P32784 759 aa1.53□□□□□ -2.16
MSN5YDR335W GPT2P36148 743 aa1.53□□□□□ -2.16
MSN5YDR335W APM3P38153 483 aa1.53□□□□□ -2.16
MSN5YDR335W EXO5P38289 585 aa1.53□□□□□ -2.16
MSN5YDR335W RIM11P38615 370 aa1.53□□□□□ -2.16
MSN5YDR335W SAE2P46946 345 aa1.53□□□□□ -2.16
MSN5YDR335W NIT3P49954 291 aa1.53□□□□□ -2.16
MSN5YDR335W SAP4P53036 818 aa1.53□□□□□ -2.16
MSN5YDR335W ADA2Q02336 434 aa1.53□□□□□ -2.16
MSN5YDR335W AIM32Q04689 311 aa1.53□□□□□ -2.16
MSN5YDR335W RSC3Q06639 885 aa1.53□□□□□ -2.16
MSN5YDR335W OMS1Q06668 471 aa1.53□□□□□ -2.16
MSN5YDR335W RCL1Q08096 367 aaPredicted RBP1.53□□□□□ -2.16
MSN5YDR335W ELG1Q12050 791 aa1.53□□□□□ -2.16
MSN5YDR335W HUA2Q12134 243 aa1.53□□□□□ -2.16
MSN5YDR335W PTC5Q12511 572 aa1.53□□□□□ -2.16
MSN5YDR335W VPS5Q92331 675 aa1.53□□□□□ -2.16
MSN5YDR335W IQG1Q12280 1495 aa1.53□□□□□ -2.16
MSN5YDR335W YMR084WA2P2R3 262 aa1.53□□□□□ -2.16
MSN5YDR335W FUS1P11710 512 aa1.53□□□□□ -2.16
MSN5YDR335W CLB4P24871 460 aa1.53□□□□□ -2.16
MSN5YDR335W TGL1P34163 548 aa1.53□□□□□ -2.16
MSN5YDR335W YKL050CP35736 922 aa1.53□□□□□ -2.16
MSN5YDR335W ACA1P39970 489 aa1.53□□□□□ -2.16
MSN5YDR335W MAM1P40065 302 aa1.53□□□□□ -2.16
MSN5YDR335W RSC8P43609 557 aaKnown RBP1.53□□□□□ -2.16
MSN5YDR335W PBP1P53297 722 aaKnown RBP1.53□□□□□ -2.16
MSN5YDR335W YPL071CQ02864 156 aa1.53□□□□□ -2.16
MSN5YDR335W SPO71Q03868 1245 aa1.53□□□□□ -2.16
MSN5YDR335W YLR456WQ06199 204 aa1.53□□□□□ -2.16
MSN5YDR335W MCP2Q06567 569 aa1.53□□□□□ -2.16
MSN5YDR335W RSB1Q08417 382 aa1.53□□□□□ -2.16
MSN5YDR335W CLF1Q12309 687 aaPredicted RBP1.53□□□□□ -2.16
MSN5YDR335W RRI2Q12348 645 aa1.53□□□□□ -2.16
MSN5YDR335W TY1A-NL1Q12391 440 aaKnown RBP1.53□□□□□ -2.16
MSN5YDR335W Q0142Q9ZZW4 58 aa1.53□□□□□ -2.16
MSN5YDR335W SAC3P46674 1301 aa1.53□□□□□ -2.16
MSN5YDR335W DBP2P24783 546 aaKnown RBP1.53□□□□□ -2.17
MSN5YDR335W PCL2P25693 308 aa1.53□□□□□ -2.17
MSN5YDR335W GPI10P30777 616 aa1.53□□□□□ -2.17
MSN5YDR335W PET10P36139 283 aa1.53□□□□□ -2.17
MSN5YDR335W TRZ1P36159 838 aaPredicted RBP1.53□□□□□ -2.17
MSN5YDR335W HXT13P39924 564 aa1.53□□□□□ -2.17
MSN5YDR335W GDI1P39958 451 aaKnown RBP1.53□□□□□ -2.17
MSN5YDR335W GTS1P40956 396 aa1.53□□□□□ -2.17
MSN5YDR335W RET2P43621 546 aa1.53□□□□□ -2.17
MSN5YDR335W KEL2P50090 882 aa1.53□□□□□ -2.17
MSN5YDR335W YGR016WP53209 190 aa1.53□□□□□ -2.17
MSN5YDR335W BUD9P53226 547 aa1.53□□□□□ -2.17
MSN5YDR335W MDR1P53258 950 aa1.53□□□□□ -2.17
MSN5YDR335W OGG1P53397 376 aaPredicted RBP1.53□□□□□ -2.17
MSN5YDR335W HXT17P53631 564 aa1.53□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 49.5 ms