RNA–Protein interactions for RNA: YDR080W

VPS41, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VPS41, Length 2,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS41YDR080W STE13P33894 931 aa3.15□□□□□ -1.9
VPS41YDR080W CHS7P38843 316 aa3.15□□□□□ -1.9
VPS41YDR080W RTR1P40084 226 aaPredicted RBP3.15□□□□□ -1.9
VPS41YDR080W TY4A-JP47023 414 aa3.15□□□□□ -1.9
VPS41YDR080W ORC1P54784 914 aaPredicted RBP3.15□□□□□ -1.9
VPS41YDR080W NPL3Q01560 414 aaKnown RBP RIP-Chip data3.15□□□□□ -1.9not detected
VPS41YDR080W IRC4Q03036 179 aa3.15□□□□□ -1.9
VPS41YDR080W VPS64Q03944 604 aa3.15□□□□□ -1.9
VPS41YDR080W PUS9Q12069 462 aa3.15□□□□□ -1.9
VPS41YDR080W CFT2Q12102 859 aaPredicted RBP3.15□□□□□ -1.9
VPS41YDR080W NOT3P06102 836 aaKnown RBP3.15□□□□□ -1.91
VPS41YDR080W TUB3P09734 445 aaKnown RBP3.15□□□□□ -1.91
VPS41YDR080W RAD53P22216 821 aa3.15□□□□□ -1.91
VPS41YDR080W HCM1P25364 564 aa3.15□□□□□ -1.91
VPS41YDR080W PER1P25625 357 aa3.15□□□□□ -1.91
VPS41YDR080W RPS7AP26786 190 aaKnown RBP3.15□□□□□ -1.91
VPS41YDR080W RAI1P53063 387 aaKnown RBP3.15□□□□□ -1.91
VPS41YDR080W PKH1Q03407 766 aa3.15□□□□□ -1.91
VPS41YDR080W THI3Q07471 609 aa3.15□□□□□ -1.91
VPS41YDR080W SUP35P05453 685 aaKnown RBP3.15□□□□□ -1.91
VPS41YDR080W PRP4P20053 465 aaKnown RBP3.15□□□□□ -1.91
VPS41YDR080W AAR2P32357 355 aaPredicted RBP3.15□□□□□ -1.91
VPS41YDR080W PET10P36139 283 aa3.15□□□□□ -1.91
VPS41YDR080W YRO2P38079 344 aa3.15□□□□□ -1.91
VPS41YDR080W KEL1P38853 1164 aaKnown RBP3.15□□□□□ -1.91
VPS41YDR080W LCD1Q04377 747 aa3.15□□□□□ -1.91
VPS41YDR080W EAF1Q06337 982 aa3.15□□□□□ -1.91
VPS41YDR080W ENV7Q12003 364 aa3.15□□□□□ -1.91
VPS41YDR080W HEM1P09950 548 aaPredicted RBP3.14□□□□□ -1.91
VPS41YDR080W RPC82P32349 654 aa3.14□□□□□ -1.91
VPS41YDR080W CCC2P38995 1004 aa3.14□□□□□ -1.91
VPS41YDR080W RTA1P53047 317 aa3.14□□□□□ -1.91
VPS41YDR080W HUL5P53119 910 aa3.14□□□□□ -1.91
VPS41YDR080W MRPS35P53292 345 aa3.14□□□□□ -1.91
VPS41YDR080W MET7Q08645 548 aa3.14□□□□□ -1.91
VPS41YDR080W AHC1Q12433 566 aa3.14□□□□□ -1.91
VPS41YDR080W TUB2P02557 457 aaKnown RBP3.14□□□□□ -1.91
VPS41YDR080W TRM2P33753 639 aa3.14□□□□□ -1.91
VPS41YDR080W NOP2P40991 618 aaKnown RBP3.14□□□□□ -1.91
VPS41YDR080W GYP8P43570 497 aa3.14□□□□□ -1.91
VPS41YDR080W NAN1Q02931 896 aaKnown RBP3.14□□□□□ -1.91
VPS41YDR080W UIP5P36137 443 aa3.13□□□□□ -1.91
VPS41YDR080W YFH7P43591 353 aa3.13□□□□□ -1.91
VPS41YDR080W PCL8Q08966 492 aa3.13□□□□□ -1.91
VPS41YDR080W FLC1Q08967 793 aa3.13□□□□□ -1.91
VPS41YDR080W ADE8P04161 214 aa3.13□□□□□ -1.91
VPS41YDR080W SEC21P32074 935 aaKnown RBP3.13□□□□□ -1.91
VPS41YDR080W MCD4P36051 919 aa3.13□□□□□ -1.91
VPS41YDR080W YHR131CP38835 850 aa3.13□□□□□ -1.91
VPS41YDR080W MAL11P53048 616 aa3.13□□□□□ -1.91
VPS41YDR080W RRP46P53256 223 aaPredicted RBP3.13□□□□□ -1.91
VPS41YDR080W FCP1Q03254 732 aa3.13□□□□□ -1.91
VPS41YDR080W YPR196WQ06595 470 aa3.13□□□□□ -1.91
VPS41YDR080W BMS1Q08965 1183 aaKnown RBP3.13□□□□□ -1.91
VPS41YDR080W SUT2Q12286 268 aa3.13□□□□□ -1.91
VPS41YDR080W GPR1Q12361 961 aa3.13□□□□□ -1.91
VPS41YDR080W PRP9P19736 530 aaKnown RBP3.12□□□□□ -1.91
VPS41YDR080W PMI40P29952 429 aaKnown RBP3.12□□□□□ -1.91
VPS41YDR080W REC104P33323 182 aa3.12□□□□□ -1.91
VPS41YDR080W ATG19P35193 415 aa3.12□□□□□ -1.91
VPS41YDR080W GSM1P42950 618 aa3.12□□□□□ -1.91
VPS41YDR080W MSE1P48525 536 aa3.12□□□□□ -1.91
VPS41YDR080W CAN1P04817 590 aa3.12□□□□□ -1.91
VPS41YDR080W ACA1P39970 489 aa3.12□□□□□ -1.91
VPS41YDR080W UBP6P43593 499 aaKnown RBP3.12□□□□□ -1.91
VPS41YDR080W ERP6P53198 216 aa3.12□□□□□ -1.91
VPS41YDR080W ZDS2P54786 942 aa3.12□□□□□ -1.91
VPS41YDR080W YOR131CQ12486 218 aa3.12□□□□□ -1.91
VPS41YDR080W PRD1P25375 712 aa3.12□□□□□ -1.91
VPS41YDR080W RGT1P32862 1170 aa3.12□□□□□ -1.91
VPS41YDR080W TIM23P32897 222 aa3.12□□□□□ -1.91
VPS41YDR080W YDR034W-BQ6Q5X2 51 aa3.12□□□□□ -1.91
VPS41YDR080W UBR2Q07963 1872 aa3.12□□□□□ -1.91
VPS41YDR080W CIT1P00890 479 aa3.11□□□□□ -1.91
VPS41YDR080W SNF3P10870 884 aa3.11□□□□□ -1.91
VPS41YDR080W KSP1P38691 1029 aaKnown RBP3.11□□□□□ -1.91
VPS41YDR080W CTF8P38877 133 aa3.11□□□□□ -1.91
VPS41YDR080W RSP5P39940 809 aaKnown RBP3.11□□□□□ -1.91
VPS41YDR080W KRI1P42846 591 aaKnown RBP3.11□□□□□ -1.91
VPS41YDR080W YKR011CQ02209 353 aa3.11□□□□□ -1.91
VPS41YDR080W YLR040CQ07988 224 aa3.11□□□□□ -1.91
VPS41YDR080W DAP1Q12091 152 aa3.11□□□□□ -1.91
VPS41YDR080W HAL9Q12180 1030 aa3.11□□□□□ -1.91
VPS41YDR080W MRP7P12687 371 aa3.11□□□□□ -1.91
VPS41YDR080W YCL002CP25565 263 aa3.11□□□□□ -1.91
VPS41YDR080W URA1P28272 314 aaPredicted RBP3.11□□□□□ -1.91
VPS41YDR080W YKR018CP36114 725 aa3.11□□□□□ -1.91
VPS41YDR080W SDP1P40479 209 aa3.11□□□□□ -1.91
VPS41YDR080W RSC8P43609 557 aaKnown RBP3.11□□□□□ -1.91
VPS41YDR080W MPP10P47083 593 aaKnown RBP3.11□□□□□ -1.91
VPS41YDR080W CCM1P48237 864 aaPredicted RBP3.11□□□□□ -1.91
VPS41YDR080W ENB1Q08299 606 aa3.11□□□□□ -1.91
VPS41YDR080W ECM29P38737 1868 aa3.1□□□□□ -1.91
VPS41YDR080W ARE1P25628 610 aa3.1□□□□□ -1.91
VPS41YDR080W OCA5P38738 679 aa3.1□□□□□ -1.91
VPS41YDR080W TIM54P47045 478 aa3.1□□□□□ -1.91
VPS41YDR080W HXT16P47185 567 aa3.1□□□□□ -1.91
VPS41YDR080W YGR125WP53273 1036 aa3.1□□□□□ -1.91
VPS41YDR080W GUP2Q08929 609 aa3.1□□□□□ -1.91
VPS41YDR080W PFK1P16861 987 aaKnown RBP3.1□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 98.5 ms