RNA–Protein interactions for RNA: YDR048C

YDR048C, Transcript of Dubious open reading frame, yeast

Gene YDR048C, Length 315 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR048C	YDR048C	USV1	Q12132	391 aa		2.65	□□□□□ -1.99
YDR048C	YDR048C	RNR1	P21524	888 aa	Known RBP	2.64	□□□□□ -1.99
YDR048C	YDR048C	YMC2	P38087	329 aa		2.64	□□□□□ -1.99
YDR048C	YDR048C	GDH3	P39708	457 aa		2.64	□□□□□ -1.99
YDR048C	YDR048C	NOP9	P47077	666 aa	Known RBP	2.64	□□□□□ -1.99
YDR048C	YDR048C	SLK19	Q08581	821 aa	Known RBP	2.64	□□□□□ -1.99
YDR048C	YDR048C	BMS1	Q08965	1183 aa	Known RBP	2.64	□□□□□ -1.99
YDR048C	YDR048C	PGK1	P00560	416 aa	Known RBP	2.63	□□□□□ -1.99
YDR048C	YDR048C	MIH1	P23748	554 aa		2.63	□□□□□ -1.99
YDR048C	YDR048C	KCC4	P25389	1037 aa		2.63	□□□□□ -1.99
YDR048C	YDR048C	YUR1	P26725	428 aa		2.63	□□□□□ -1.99
YDR048C	YDR048C	STO1	P34160	861 aa	Known RBP	2.63	□□□□□ -1.99
YDR048C	YDR048C	BIT2	P38346	545 aa		2.63	□□□□□ -1.99
YDR048C	YDR048C	MIT1	P40002	666 aa		2.63	□□□□□ -1.99
YDR048C	YDR048C	YFL052W	P43551	465 aa		2.63	□□□□□ -1.99
YDR048C	YDR048C	CAF16	P43569	289 aa		2.63	□□□□□ -1.99
YDR048C	YDR048C	SNP1	Q00916	300 aa	Predicted RBP	2.63	□□□□□ -1.99
YDR048C	YDR048C	THI22	Q06490	572 aa		2.63	□□□□□ -1.99
YDR048C	YDR048C	PRP28	P23394	588 aa		2.62	□□□□□ -1.99
YDR048C	YDR048C	YKR018C	P36114	725 aa		2.62	□□□□□ -1.99
YDR048C	YDR048C	GAT1	P43574	510 aa		2.62	□□□□□ -1.99
YDR048C	YDR048C	YGR151C	P53287	111 aa		2.62	□□□□□ -1.99
YDR048C	YDR048C	MDM12	Q92328	271 aa		2.62	□□□□□ -1.99
YDR048C	YDR048C	Q0142	Q9ZZW4	58 aa		2.62	□□□□□ -1.99
YDR048C	YDR048C	RAD18	P10862	487 aa		2.61	□□□□□ -1.99
YDR048C	YDR048C	SAT4	P25333	603 aa	Known RBP	2.61	□□□□□ -1.99
YDR048C	YDR048C	BCS1	P32839	456 aa		2.61	□□□□□ -1.99
YDR048C	YDR048C	UGP1	P32861	499 aa	Known RBP	2.61	□□□□□ -1.99
YDR048C	YDR048C	YKR051W	P36142	418 aa		2.61	□□□□□ -1.99
YDR048C	YDR048C	RPN10	P38886	268 aa	Known RBP	2.61	□□□□□ -1.99
YDR048C	YDR048C	PIG2	P40187	538 aa		2.61	□□□□□ -1.99
YDR048C	YDR048C	RSC8	P43609	557 aa	Known RBP	2.61	□□□□□ -1.99
YDR048C	YDR048C	PCL10	P53124	433 aa		2.61	□□□□□ -1.99
YDR048C	YDR048C	NPY1	P53164	384 aa		2.61	□□□□□ -1.99
YDR048C	YDR048C	HFD1	Q04458	532 aa		2.61	□□□□□ -1.99
YDR048C	YDR048C	PHO5	P00635	467 aa		2.6	□□□□□ -1.99
YDR048C	YDR048C	ABF1	P14164	731 aa		2.6	□□□□□ -1.99
YDR048C	YDR048C	STI1	P15705	589 aa	Known RBP RIP-Chip data	2.6	□□□□□ -1.99	not detected
YDR048C	YDR048C	MBR1	P23493	339 aa		2.6	□□□□□ -1.99
YDR048C	YDR048C	PTP1	P25044	335 aa		2.6	□□□□□ -1.99
YDR048C	YDR048C	KSP1	P38691	1029 aa	Known RBP	2.6	□□□□□ -1.99
YDR048C	YDR048C	CHZ1	P40019	153 aa	Predicted RBP	2.6	□□□□□ -1.99
YDR048C	YDR048C	NET1	P47035	1189 aa		2.6	□□□□□ -1.99
YDR048C	YDR048C	ARP4	P80428	489 aa		2.6	□□□□□ -1.99
YDR048C	YDR048C	NSE3	Q05541	303 aa		2.6	□□□□□ -1.99
YDR048C	YDR048C	YDL086W	Q07505	273 aa		2.6	□□□□□ -1.99
YDR048C	YDR048C	DIA2	Q08496	732 aa	Predicted RBP	2.6	□□□□□ -1.99
YDR048C	YDR048C	CHS5	Q12114	671 aa	Known RBP	2.6	□□□□□ -1.99
YDR048C	YDR048C	RGT2	Q12300	763 aa		2.6	□□□□□ -1.99
YDR048C	YDR048C	CDC9	P04819	755 aa		2.59	□□□□□ -1.99
YDR048C	YDR048C	ADE5,7	P07244	802 aa	Known RBP	2.59	□□□□□ -1.99
YDR048C	YDR048C	ERG11	P10614	530 aa		2.59	□□□□□ -1.99
YDR048C	YDR048C	RPA135	P22138	1203 aa	Known RBP	2.59	□□□□□ -1.99
YDR048C	YDR048C	YMC1	P32331	307 aa		2.59	□□□□□ -1.99
YDR048C	YDR048C	MSS1	P32559	526 aa	Predicted RBP	2.59	□□□□□ -1.99
YDR048C	YDR048C	YPT7	P32939	208 aa		2.59	□□□□□ -1.99
YDR048C	YDR048C	CTP1	P38152	299 aa		2.59	□□□□□ -1.99
YDR048C	YDR048C	HSL7	P38274	827 aa		2.59	□□□□□ -1.99
YDR048C	YDR048C	PMC1	P38929	1173 aa	Predicted RBP	2.59	□□□□□ -1.99
YDR048C	YDR048C	CCT5	P40413	562 aa	Known RBP	2.59	□□□□□ -1.99
YDR048C	YDR048C	SET2	P46995	733 aa	Known RBP	2.59	□□□□□ -1.99
YDR048C	YDR048C	LEE1	Q02799	301 aa	Known RBP	2.59	□□□□□ -1.99
YDR048C	YDR048C	RPN7	Q06103	429 aa	Known RBP	2.59	□□□□□ -1.99
YDR048C	YDR048C	CIR2	Q08822	631 aa		2.59	□□□□□ -1.99
YDR048C	YDR048C	ECM3	Q99252	613 aa		2.59	□□□□□ -1.99
YDR048C	YDR048C	STE12	P13574	688 aa		2.58	□□□□□ -2
YDR048C	YDR048C	APN1	P22936	367 aa		2.58	□□□□□ -2
YDR048C	YDR048C	FEN2	P25621	512 aa	Known RBP	2.58	□□□□□ -2
YDR048C	YDR048C	HOG1	P32485	435 aa		2.58	□□□□□ -2
YDR048C	YDR048C	YHR097C	P38809	366 aa	Known RBP	2.58	□□□□□ -2
YDR048C	YDR048C	KHA1	P40309	873 aa		2.58	□□□□□ -2
YDR048C	YDR048C	XBP1	P40489	647 aa		2.58	□□□□□ -2
YDR048C	YDR048C	MPS3	P47069	682 aa		2.58	□□□□□ -2
YDR048C	YDR048C	ASN1	P49089	572 aa	Known RBP	2.58	□□□□□ -2
YDR048C	YDR048C	SPC98	P53540	846 aa		2.58	□□□□□ -2
YDR048C	YDR048C	FMP30	Q02883	468 aa		2.58	□□□□□ -2
YDR048C	YDR048C	NHX1	Q04121	633 aa		2.58	□□□□□ -2
YDR048C	YDR048C	YSH1	Q06224	779 aa	Predicted RBP	2.58	□□□□□ -2
YDR048C	YDR048C	ULA1	Q12059	462 aa		2.58	□□□□□ -2
YDR048C	YDR048C	RKI1	Q12189	258 aa		2.58	□□□□□ -2
YDR048C	YDR048C	TPK2	P06245	380 aa		2.57	□□□□□ -2
YDR048C	YDR048C	ERR1	P0CX10	437 aa		2.57	□□□□□ -2
YDR048C	YDR048C	ERR2	P0CX11	437 aa		2.57	□□□□□ -2
YDR048C	YDR048C	YEL1	P34225	687 aa		2.57	□□□□□ -2
YDR048C	YDR048C	APN2	P38207	520 aa		2.57	□□□□□ -2
YDR048C	YDR048C	YNL195C	P40168	261 aa		2.57	□□□□□ -2
YDR048C	YDR048C	SCS3	P53012	380 aa		2.57	□□□□□ -2
YDR048C	YDR048C	SNF12	P53628	566 aa		2.57	□□□□□ -2
YDR048C	YDR048C	BRE5	P53741	515 aa	Known RBP	2.57	□□□□□ -2
YDR048C	YDR048C	COG8	Q04632	607 aa		2.57	□□□□□ -2
YDR048C	YDR048C	ARG7	Q04728	441 aa		2.57	□□□□□ -2
YDR048C	YDR048C	CDC53	Q12018	815 aa	Known RBP	2.57	□□□□□ -2
YDR048C	YDR048C	LAM4	P38800	1345 aa		2.57	□□□□□ -2
YDR048C	YDR048C	GSY1	P23337	708 aa		2.56	□□□□□ -2
YDR048C	YDR048C	APL3	P38065	1025 aa		2.56	□□□□□ -2
YDR048C	YDR048C	SSZ1	P38788	538 aa	Known RBP	2.56	□□□□□ -2
YDR048C	YDR048C	TAX4	P47030	604 aa		2.56	□□□□□ -2
YDR048C	YDR048C	YJR039W	P47107	1121 aa		2.56	□□□□□ -2
YDR048C	YDR048C	BPL1	P48445	690 aa	Predicted RBP	2.56	□□□□□ -2
YDR048C	YDR048C	RFX1	P48743	811 aa		2.56	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 36.7 ms