RNA–Protein interactions for RNA: YDR006C

SOK1, Transcript of Protein of unknown function, yeast

Gene SOK1, Length 2,706 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SOK1	YDR006C	YKE2	P52553	114 aa		3.15	□□□□□ -1.9
SOK1	YDR006C	AIM14	P53109	570 aa		3.15	□□□□□ -1.9
SOK1	YDR006C	DUS3	Q06053	668 aa	Known RBP	3.15	□□□□□ -1.9
SOK1	YDR006C	ATG33	Q06485	197 aa		3.15	□□□□□ -1.9
SOK1	YDR006C	ENV7	Q12003	364 aa		3.15	□□□□□ -1.9
SOK1	YDR006C	ELG1	Q12050	791 aa		3.15	□□□□□ -1.9
SOK1	YDR006C	APM4	Q99186	491 aa		3.15	□□□□□ -1.9
SOK1	YDR006C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	3.15	□□□□□ -1.91	not detected
SOK1	YDR006C	THR1	P17423	357 aa	Known RBP	3.15	□□□□□ -1.91
SOK1	YDR006C	ACE2	P21192	770 aa		3.15	□□□□□ -1.91
SOK1	YDR006C	RET1	P22276	1149 aa	Known RBP	3.15	□□□□□ -1.91
SOK1	YDR006C	APN1	P22936	367 aa		3.15	□□□□□ -1.91
SOK1	YDR006C	SED4	P25365	1065 aa		3.15	□□□□□ -1.91
SOK1	YDR006C	KNS1	P32350	737 aa	Predicted RBP	3.15	□□□□□ -1.91
SOK1	YDR006C	ACP1	P32463	125 aa		3.15	□□□□□ -1.91
SOK1	YDR006C	MRS6	P32864	603 aa	Known RBP	3.15	□□□□□ -1.91
SOK1	YDR006C	MTH1	P35198	433 aa		3.15	□□□□□ -1.91
SOK1	YDR006C	RNR4	P49723	345 aa	Known RBP	3.15	□□□□□ -1.91
SOK1	YDR006C	HNT2	P49775	206 aa		3.15	□□□□□ -1.91
SOK1	YDR006C	FOL2	P51601	243 aa	Known RBP	3.15	□□□□□ -1.91
SOK1	YDR006C	BTN2	P53286	410 aa		3.15	□□□□□ -1.91
SOK1	YDR006C	BNI5	P53890	448 aa	Known RBP	3.15	□□□□□ -1.91
SOK1	YDR006C	ECM22	Q05958	814 aa	Predicted RBP	3.15	□□□□□ -1.91
SOK1	YDR006C	OPY2	Q06810	360 aa		3.15	□□□□□ -1.91
SOK1	YDR006C	YPL272C	Q08984	517 aa		3.15	□□□□□ -1.91
SOK1	YDR006C	NUP145	P49687	1317 aa		3.15	□□□□□ -1.91
SOK1	YDR006C	RAD18	P10862	487 aa		3.14	□□□□□ -1.91
SOK1	YDR006C	ADP1	P25371	1049 aa		3.14	□□□□□ -1.91
SOK1	YDR006C	ORC2	P32833	620 aa		3.14	□□□□□ -1.91
SOK1	YDR006C	SET3	P36124	751 aa		3.14	□□□□□ -1.91
SOK1	YDR006C	DSS1	P39112	969 aa		3.14	□□□□□ -1.91
SOK1	YDR006C	ARB1	P40024	610 aa	Known RBP	3.14	□□□□□ -1.91
SOK1	YDR006C	MNN11	P46985	422 aa	Known RBP	3.14	□□□□□ -1.91
SOK1	YDR006C	SFB2	P53953	876 aa		3.14	□□□□□ -1.91
SOK1	YDR006C	YPL071C	Q02864	156 aa		3.14	□□□□□ -1.91
SOK1	YDR006C	HFI1	Q12060	488 aa		3.14	□□□□□ -1.91
SOK1	YDR006C	TY1A-NL1	Q12391	440 aa	Known RBP	3.14	□□□□□ -1.91
SOK1	YDR006C	SPO21	Q12411	609 aa		3.14	□□□□□ -1.91
SOK1	YDR006C	GRX6	Q12438	231 aa		3.14	□□□□□ -1.91
SOK1	YDR006C	AEP2	P22136	580 aa		3.14	□□□□□ -1.91
SOK1	YDR006C	YCL002C	P25565	263 aa		3.14	□□□□□ -1.91
SOK1	YDR006C	YEL1	P34225	687 aa		3.14	□□□□□ -1.91
SOK1	YDR006C	MIC60	P36112	540 aa		3.14	□□□□□ -1.91
SOK1	YDR006C	GIC1	P38785	314 aa		3.14	□□□□□ -1.91
SOK1	YDR006C	MRX1	P40050	688 aa		3.14	□□□□□ -1.91
SOK1	YDR006C	RAD26	P40352	1085 aa		3.14	□□□□□ -1.91
SOK1	YDR006C	YIL166C	P40445	542 aa		3.14	□□□□□ -1.91
SOK1	YDR006C	ALG2	P43636	503 aa		3.14	□□□□□ -1.91
SOK1	YDR006C	YNR068C	P53754	272 aa		3.14	□□□□□ -1.91
SOK1	YDR006C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	3.14	□□□□□ -1.91	not detected
SOK1	YDR006C	HFD1	Q04458	532 aa		3.14	□□□□□ -1.91
SOK1	YDR006C	GTB1	Q04924	702 aa		3.14	□□□□□ -1.91
SOK1	YDR006C	RSC3	Q06639	885 aa		3.14	□□□□□ -1.91
SOK1	YDR006C	TSR2	Q06672	205 aa	Known RBP	3.14	□□□□□ -1.91
SOK1	YDR006C	PSY3	Q12318	242 aa		3.14	□□□□□ -1.91
SOK1	YDR006C	SEM1	O94742	89 aa		3.13	□□□□□ -1.91
SOK1	YDR006C	HMG1	P12683	1054 aa		3.13	□□□□□ -1.91
SOK1	YDR006C	DAP2	P18962	818 aa		3.13	□□□□□ -1.91
SOK1	YDR006C	GFD2	P25370	566 aa	Known RBP	3.13	□□□□□ -1.91
SOK1	YDR006C	SAS3	P34218	831 aa		3.13	□□□□□ -1.91
SOK1	YDR006C	YLF2	P38746	405 aa		3.13	□□□□□ -1.91
SOK1	YDR006C	MEF2	P39677	819 aa		3.13	□□□□□ -1.91
SOK1	YDR006C	SAH1	P39954	449 aa	Known RBP	3.13	□□□□□ -1.91
SOK1	YDR006C	YER010C	P40011	234 aa		3.13	□□□□□ -1.91
SOK1	YDR006C	PUG1	P40100	303 aa		3.13	□□□□□ -1.91
SOK1	YDR006C	CIR1	P42940	261 aa		3.13	□□□□□ -1.91
SOK1	YDR006C	RPN14	P53196	417 aa		3.13	□□□□□ -1.91
SOK1	YDR006C	ARP4	P80428	489 aa		3.13	□□□□□ -1.91
SOK1	YDR006C	YTM1	Q12024	460 aa	Predicted RBP	3.13	□□□□□ -1.91
SOK1	YDR006C	SGT2	Q12118	346 aa	Known RBP	3.13	□□□□□ -1.91
SOK1	YDR006C	SOD2	P00447	233 aa		3.13	□□□□□ -1.91
SOK1	YDR006C	KAR3	P17119	729 aa		3.13	□□□□□ -1.91
SOK1	YDR006C	MRPL25	P23369	157 aa		3.13	□□□□□ -1.91
SOK1	YDR006C	PER1	P25625	357 aa		3.13	□□□□□ -1.91
SOK1	YDR006C	ADH5	P38113	351 aa	Known RBP	3.13	□□□□□ -1.91
SOK1	YDR006C	MAD2	P40958	196 aa		3.13	□□□□□ -1.91
SOK1	YDR006C	VID22	Q05934	901 aa		3.13	□□□□□ -1.91
SOK1	YDR006C	ADY3	Q07732	790 aa		3.13	□□□□□ -1.91
SOK1	YDR006C	APL5	Q08951	932 aa	Known RBP	3.13	□□□□□ -1.91
SOK1	YDR006C	RRG1	Q12167	365 aa	Predicted RBP	3.13	□□□□□ -1.91
SOK1	YDR006C	RIB2	Q12362	591 aa	Known RBP	3.13	□□□□□ -1.91
SOK1	YDR006C	SKS1	Q12505	502 aa		3.13	□□□□□ -1.91
SOK1	YDR006C	SAM35	P14693	329 aa		3.13	□□□□□ -1.91
SOK1	YDR006C	DAL7	P21826	554 aa		3.13	□□□□□ -1.91
SOK1	YDR006C	CTF13	P35203	478 aa		3.13	□□□□□ -1.91
SOK1	YDR006C	GPT2	P36148	743 aa		3.13	□□□□□ -1.91
SOK1	YDR006C	RFC3	P38629	340 aa		3.13	□□□□□ -1.91
SOK1	YDR006C	IRC5	P43610	853 aa		3.13	□□□□□ -1.91
SOK1	YDR006C	LRS4	Q04087	347 aa	Known RBP	3.13	□□□□□ -1.91
SOK1	YDR006C	APC5	Q08683	685 aa		3.13	□□□□□ -1.91
SOK1	YDR006C	SMF3	Q12078	473 aa	Predicted RBP	3.13	□□□□□ -1.91
SOK1	YDR006C	RTK1	Q12100	620 aa	Predicted RBP	3.13	□□□□□ -1.91
SOK1	YDR006C	DCS2	Q12123	353 aa		3.13	□□□□□ -1.91
SOK1	YDR006C	NOP58	Q12499	511 aa	Known RBP	3.13	□□□□□ -1.91
SOK1	YDR006C	CDC16	P09798	840 aa		3.12	□□□□□ -1.91
SOK1	YDR006C	PDX1	P16451	410 aa		3.12	□□□□□ -1.91
SOK1	YDR006C	YCL049C	P25577	312 aa		3.12	□□□□□ -1.91
SOK1	YDR006C	AAR2	P32357	355 aa	Predicted RBP	3.12	□□□□□ -1.91
SOK1	YDR006C	SFP1	P32432	683 aa		3.12	□□□□□ -1.91
SOK1	YDR006C	IME2	P32581	645 aa		3.12	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 100.4 ms