RNA–Protein interactions for RNA: YDL006W

PTC1, Transcript of Type 2C protein phosphatase (PP2C), yeastyeast

Gene PTC1, Length 846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTC1YDL006W FLR1P38124 548 aa5.67□□□□□ -1.5
PTC1YDL006W PZF1P39933 429 aa5.67□□□□□ -1.5
PTC1YDL006W RPN7Q06103 429 aaKnown RBP5.67□□□□□ -1.5
PTC1YDL006W YLR149CQ99296 730 aa5.67□□□□□ -1.5
PTC1YDL006W YLR358CO13565 187 aa5.66□□□□□ -1.5
PTC1YDL006W SEC21P32074 935 aaKnown RBP5.66□□□□□ -1.5
PTC1YDL006W PRP19P32523 503 aaKnown RBP5.66□□□□□ -1.5
PTC1YDL006W TOD6P34219 525 aa5.66□□□□□ -1.5
PTC1YDL006W PLB1P39105 664 aa5.66□□□□□ -1.5
PTC1YDL006W RET2P43621 546 aa5.66□□□□□ -1.5
PTC1YDL006W PCL10P53124 433 aa5.66□□□□□ -1.5
PTC1YDL006W ENB1Q08299 606 aa5.66□□□□□ -1.5
PTC1YDL006W YTM1Q12024 460 aaPredicted RBP5.66□□□□□ -1.5
PTC1YDL006W SWM1Q12379 170 aa5.66□□□□□ -1.5
PTC1YDL006W HAP1P0CE41 1502 aa5.65□□□□□ -1.5
PTC1YDL006W TUB3P09734 445 aaKnown RBP5.65□□□□□ -1.5
PTC1YDL006W ESL2P36168 1195 aa5.65□□□□□ -1.5
PTC1YDL006W TAF5P38129 798 aa5.65□□□□□ -1.5
PTC1YDL006W SAK1P38990 1142 aa5.65□□□□□ -1.5
PTC1YDL006W GPP1P41277 250 aaKnown RBP5.65□□□□□ -1.5
PTC1YDL006W GZF3P42944 551 aaKnown RBP5.65□□□□□ -1.5
PTC1YDL006W AVT1P47082 602 aa5.65□□□□□ -1.5
PTC1YDL006W MTR3P48240 250 aaPredicted RBP5.65□□□□□ -1.5
PTC1YDL006W UBC9P50623 157 aaPredicted RBP5.65□□□□□ -1.5
PTC1YDL006W EXG2P52911 562 aa5.65□□□□□ -1.5
PTC1YDL006W MUS81Q04149 632 aaPredicted RBP5.65□□□□□ -1.5
PTC1YDL006W IOC4Q04213 475 aa5.65□□□□□ -1.5
PTC1YDL006W GPR1Q12361 961 aa5.65□□□□□ -1.5
PTC1YDL006W LST4P34239 828 aa5.64□□□□□ -1.51
PTC1YDL006W THI80P35202 319 aa5.64□□□□□ -1.51
PTC1YDL006W SIC1P38634 284 aa5.64□□□□□ -1.51
PTC1YDL006W PFA3P42836 336 aa5.64□□□□□ -1.51
PTC1YDL006W PKH1Q03407 766 aa5.64□□□□□ -1.51
PTC1YDL006W TRM11Q12463 433 aa5.64□□□□□ -1.51
PTC1YDL006W RNQ1P25367 405 aa5.63□□□□□ -1.51
PTC1YDL006W TOM20P35180 183 aa5.63□□□□□ -1.51
PTC1YDL006W MIP6P38760 659 aaKnown RBP5.63□□□□□ -1.51
PTC1YDL006W CCT5P40413 562 aaKnown RBP5.63□□□□□ -1.51
PTC1YDL006W VHR1P40522 640 aa5.63□□□□□ -1.51
PTC1YDL006W PEX19Q07418 342 aa5.63□□□□□ -1.51
PTC1YDL006W Q0142Q9ZZW4 58 aa5.63□□□□□ -1.51
PTC1YDL006W YLR415CO13578 112 aa5.62□□□□□ -1.51
PTC1YDL006W KAR4P25583 335 aa5.62□□□□□ -1.51
PTC1YDL006W MAL31P38156 614 aa5.62□□□□□ -1.51
PTC1YDL006W TDA3P38758 523 aa5.62□□□□□ -1.51
PTC1YDL006W ECM1P39715 212 aa5.62□□□□□ -1.51
PTC1YDL006W OAF1P39720 1047 aaPredicted RBP5.62□□□□□ -1.51
PTC1YDL006W MNN11P46985 422 aaKnown RBP5.62□□□□□ -1.51
PTC1YDL006W YJR039WP47107 1121 aa5.62□□□□□ -1.51
PTC1YDL006W YGR153WP48238 217 aa5.62□□□□□ -1.51
PTC1YDL006W MNN10P50108 393 aaKnown RBP5.62□□□□□ -1.51
PTC1YDL006W NRD1P53617 575 aaKnown RBP RIP-Chip data5.62□□□□□ -1.51 RIP-Chip
PTC1YDL006W ORC4P54791 529 aa5.62□□□□□ -1.51
PTC1YDL006W SLU7Q02775 382 aaKnown RBP5.62□□□□□ -1.51
PTC1YDL006W TMA10Q06177 86 aa5.62□□□□□ -1.51
PTC1YDL006W CTF13P35203 478 aa5.61□□□□□ -1.51
PTC1YDL006W MSS4P38994 779 aa5.61□□□□□ -1.51
PTC1YDL006W YBP2P53169 641 aa5.61□□□□□ -1.51
PTC1YDL006W RIA1P53893 1110 aa5.61□□□□□ -1.51
PTC1YDL006W CLU1Q03690 1277 aaKnown RBP5.61□□□□□ -1.51
PTC1YDL006W DCS2Q12123 353 aa5.61□□□□□ -1.51
PTC1YDL006W RAD9P14737 1309 aa5.6□□□□□ -1.51
PTC1YDL006W PRP4P20053 465 aaKnown RBP5.6□□□□□ -1.51
PTC1YDL006W DCG1P32460 244 aa5.6□□□□□ -1.51
PTC1YDL006W DID4P36108 232 aa5.6□□□□□ -1.51
PTC1YDL006W YBR259WP38338 688 aa5.6□□□□□ -1.51
PTC1YDL006W SSZ1P38788 538 aaKnown RBP5.6□□□□□ -1.51
PTC1YDL006W DUG1P43616 481 aaKnown RBP5.6□□□□□ -1.51
PTC1YDL006W TRE2Q08693 809 aa5.6□□□□□ -1.51
PTC1YDL006W TMA17Q12513 150 aa5.6□□□□□ -1.51
PTC1YDL006W APM4Q99186 491 aa5.6□□□□□ -1.51
PTC1YDL006W BCK1Q01389 1478 aa5.59□□□□□ -1.51
PTC1YDL006W KRE5P22023 1365 aa5.59□□□□□ -1.51
PTC1YDL006W MNN4P36044 1178 aa5.59□□□□□ -1.51
PTC1YDL006W GID8P40208 455 aa5.59□□□□□ -1.51
PTC1YDL006W ARP4P80428 489 aa5.59□□□□□ -1.51
PTC1YDL006W EUG1P32474 517 aa5.58□□□□□ -1.52
PTC1YDL006W APT2P36973 181 aa5.58□□□□□ -1.52
PTC1YDL006W YBR071WP38243 211 aa5.58□□□□□ -1.52
PTC1YDL006W RPP1P38786 293 aa5.58□□□□□ -1.52
PTC1YDL006W MCM6P53091 1017 aaKnown RBP5.58□□□□□ -1.52
PTC1YDL006W GPD1Q00055 391 aaKnown RBP5.58□□□□□ -1.52
PTC1YDL006W ECM9Q02202 377 aa5.58□□□□□ -1.52
PTC1YDL006W ASM4Q05166 528 aa5.58□□□□□ -1.52
PTC1YDL006W MCM21Q06675 368 aa5.58□□□□□ -1.52
PTC1YDL006W SPE2P21182 396 aa5.57□□□□□ -1.52
PTC1YDL006W CAD1P24813 409 aaKnown RBP5.57□□□□□ -1.52
PTC1YDL006W APL2P36000 726 aaPredicted RBP5.57□□□□□ -1.52
PTC1YDL006W UBP5P39944 805 aa5.57□□□□□ -1.52
PTC1YDL006W BFA1P47113 574 aa5.57□□□□□ -1.52
PTC1YDL006W PRP31P49704 494 aaPredicted RBP5.57□□□□□ -1.52
PTC1YDL006W ERG5P54781 538 aa5.57□□□□□ -1.52
PTC1YDL006W ARG5,6Q01217 863 aa5.57□□□□□ -1.52
PTC1YDL006W NRG1Q03125 231 aa5.57□□□□□ -1.52
PTC1YDL006W NUP192P47054 1683 aa5.56□□□□□ -1.52
PTC1YDL006W PMA1P05030 918 aaKnown RBP5.56□□□□□ -1.52
PTC1YDL006W TRP4P07285 380 aaPredicted RBP5.56□□□□□ -1.52
PTC1YDL006W PFK1P16861 987 aaKnown RBP5.56□□□□□ -1.52
PTC1YDL006W YKR075CP36155 307 aa5.56□□□□□ -1.52
PTC1YDL006W APN2P38207 520 aa5.56□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 65.5 ms