RNA–Protein interactions for RNA: YDL003W

MCD1, Transcript of Essential alpha-kleisin subunit of the cohesin complex, yeastyeast

Gene MCD1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MCD1YDL003W SMC4Q12267 1418 aa2.6□□□□□ -1.99
MCD1YDL003W YTA7P40340 1379 aa2.6□□□□□ -1.99
MCD1YDL003W STE12P13574 688 aa2.59□□□□□ -1.99
MCD1YDL003W APN1P22936 367 aa2.59□□□□□ -1.99
MCD1YDL003W VPS24P36095 224 aaKnown RBP2.59□□□□□ -1.99
MCD1YDL003W DSN1P40568 576 aa2.59□□□□□ -1.99
MCD1YDL003W FHN1P53279 174 aa2.59□□□□□ -1.99
MCD1YDL003W ORC4P54791 529 aa2.59□□□□□ -1.99
MCD1YDL003W DOS2P54858 310 aa2.59□□□□□ -1.99
MCD1YDL003W MLH3Q12083 715 aa2.59□□□□□ -1.99
MCD1YDL003W CLF1Q12309 687 aaPredicted RBP2.59□□□□□ -1.99
MCD1YDL003W GPR1Q12361 961 aa2.59□□□□□ -1.99
MCD1YDL003W TOP2P06786 1428 aaKnown RBP2.59□□□□□ -1.99
MCD1YDL003W BUD4P47136 1447 aa2.59□□□□□ -1.99
MCD1YDL003W SAT4P25333 603 aaKnown RBP2.59□□□□□ -2
MCD1YDL003W HRB1P38922 454 aaKnown RBP RIP-Chip data2.59□□□□□ -2not detected
MCD1YDL003W TPM2P40414 161 aa2.59□□□□□ -2
MCD1YDL003W RLP7P40693 322 aaKnown RBP2.59□□□□□ -2
MCD1YDL003W NNF2P53253 936 aa2.59□□□□□ -2
MCD1YDL003W YGR283CP53336 341 aaPredicted RBP2.59□□□□□ -2
MCD1YDL003W OSH2Q12451 1283 aa2.59□□□□□ -2
MCD1YDL003W CFT1Q06632 1357 aaKnown RBP2.58□□□□□ -2
MCD1YDL003W PAN1P32521 1480 aa2.58□□□□□ -2
MCD1YDL003W PHR1P05066 565 aaKnown RBP RIP-Chip data2.58□□□□□ -2not detected
MCD1YDL003W RPL8BP29453 256 aaKnown RBP2.58□□□□□ -2
MCD1YDL003W LTV1P34078 463 aa2.58□□□□□ -2
MCD1YDL003W YHR112CP38716 378 aa2.58□□□□□ -2
MCD1YDL003W MEP2P41948 499 aa2.58□□□□□ -2
MCD1YDL003W UBP6P43593 499 aaKnown RBP2.58□□□□□ -2
MCD1YDL003W PIL1P53252 339 aaKnown RBP2.58□□□□□ -2
MCD1YDL003W ALD6P54115 500 aaKnown RBP2.58□□□□□ -2
MCD1YDL003W PRP3Q03338 469 aaPredicted RBP2.58□□□□□ -2
MCD1YDL003W TDA9Q04545 1251 aa2.58□□□□□ -2
MCD1YDL003W COG8Q04632 607 aa2.58□□□□□ -2
MCD1YDL003W RLP24Q07915 199 aaKnown RBP2.58□□□□□ -2
MCD1YDL003W YBR182C-AQ8TGU6 64 aa2.58□□□□□ -2
MCD1YDL003W TOM70P07213 617 aaKnown RBP2.57□□□□□ -2
MCD1YDL003W UGP1P32861 499 aaKnown RBP2.57□□□□□ -2
MCD1YDL003W APL2P36000 726 aaPredicted RBP2.57□□□□□ -2
MCD1YDL003W LYS9P38999 446 aa2.57□□□□□ -2
MCD1YDL003W RAD26P40352 1085 aa2.57□□□□□ -2
MCD1YDL003W DJP1P40564 432 aa2.57□□□□□ -2
MCD1YDL003W GYP8P43570 497 aa2.57□□□□□ -2
MCD1YDL003W SSM4P40318 1319 aa2.57□□□□□ -2
MCD1YDL003W SRB8P25648 1427 aa2.57□□□□□ -2
MCD1YDL003W ABF1P14164 731 aa2.56□□□□□ -2
MCD1YDL003W ADE2P21264 571 aaKnown RBP2.56□□□□□ -2
MCD1YDL003W CLB1P24868 471 aa2.56□□□□□ -2
MCD1YDL003W RPS0AP32905 252 aaKnown RBP2.56□□□□□ -2
MCD1YDL003W TCD1P38756 429 aa2.56□□□□□ -2
MCD1YDL003W CRP1P38845 465 aaKnown RBP2.56□□□□□ -2
MCD1YDL003W YIR014WP40570 242 aa2.56□□□□□ -2
MCD1YDL003W TAN1P53072 289 aaPredicted RBP2.56□□□□□ -2
MCD1YDL003W STP1Q00947 519 aa2.56□□□□□ -2
MCD1YDL003W YDL124WQ07551 312 aaKnown RBP2.56□□□□□ -2
MCD1YDL003W CDC45Q08032 650 aa2.56□□□□□ -2
MCD1YDL003W MYO2P19524 1574 aaKnown RBP2.56□□□□□ -2
MCD1YDL003W MMS1Q06211 1407 aa2.56□□□□□ -2
MCD1YDL003W THR1P17423 357 aaKnown RBP2.56□□□□□ -2
MCD1YDL003W GRX1P25373 110 aaKnown RBP2.56□□□□□ -2
MCD1YDL003W DEP1P31385 405 aa2.56□□□□□ -2
MCD1YDL003W PMC1P38929 1173 aaPredicted RBP2.56□□□□□ -2
MCD1YDL003W TAX4P47030 604 aa2.56□□□□□ -2
MCD1YDL003W NOP7P53261 605 aaKnown RBP2.56□□□□□ -2
MCD1YDL003W ARG5,6Q01217 863 aa2.56□□□□□ -2
MCD1YDL003W VPS60Q03390 229 aa2.56□□□□□ -2
MCD1YDL003W MET7Q08645 548 aa2.56□□□□□ -2
MCD1YDL003W WRS1Q12109 432 aaKnown RBP2.56□□□□□ -2
MCD1YDL003W MHP1P43638 1398 aa2.56□□□□□ -2
MCD1YDL003W HSP60P19882 572 aaKnown RBP2.55□□□□□ -2
MCD1YDL003W SWE1P32944 819 aa2.55□□□□□ -2
MCD1YDL003W ALY2P47029 1046 aa2.55□□□□□ -2
MCD1YDL003W YGR151CP53287 111 aa2.55□□□□□ -2
MCD1YDL003W NAN1Q02931 896 aaKnown RBP2.55□□□□□ -2
MCD1YDL003W MON2P48563 1636 aaPredicted RBP2.55□□□□□ -2
MCD1YDL003W SPT6P23615 1451 aaKnown RBP2.54□□□□□ -2
MCD1YDL003W RPP0P05317 312 aaKnown RBP2.54□□□□□ -2
MCD1YDL003W PCT1P13259 424 aa2.54□□□□□ -2
MCD1YDL003W MSP1P28737 362 aa2.54□□□□□ -2
MCD1YDL003W YMC1P32331 307 aa2.54□□□□□ -2
MCD1YDL003W HUL4P40985 892 aa2.54□□□□□ -2
MCD1YDL003W ALG2P43636 503 aa2.54□□□□□ -2
MCD1YDL003W ORC1P54784 914 aaPredicted RBP2.54□□□□□ -2
MCD1YDL003W ORM2Q06144 216 aa2.54□□□□□ -2
MCD1YDL003W YSH1Q06224 779 aaPredicted RBP2.54□□□□□ -2
MCD1YDL003W MCM21Q06675 368 aa2.54□□□□□ -2
MCD1YDL003W DIA2Q08496 732 aaPredicted RBP2.54□□□□□ -2
MCD1YDL003W CIR2Q08822 631 aa2.54□□□□□ -2
MCD1YDL003W HRP1Q99383 534 aaKnown RBP2.54□□□□□ -2
MCD1YDL003W SWR1Q05471 1514 aa2.54□□□□□ -2
MCD1YDL003W TAF2P23255 1407 aa2.54□□□□□ -2
MCD1YDL003W EDE1P34216 1381 aa2.54□□□□□ -2
MCD1YDL003W ERG6P25087 383 aaKnown RBP2.54□□□□□ -2
MCD1YDL003W PER1P25625 357 aa2.54□□□□□ -2
MCD1YDL003W SET3P36124 751 aa2.54□□□□□ -2
MCD1YDL003W YMC2P38087 329 aa2.54□□□□□ -2
MCD1YDL003W VPS27P40343 622 aaKnown RBP2.54□□□□□ -2
MCD1YDL003W YFL052WP43551 465 aa2.54□□□□□ -2
MCD1YDL003W RPN7Q06103 429 aaKnown RBP2.54□□□□□ -2
MCD1YDL003W ULA1Q12059 462 aa2.54□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms