RNA–Protein interactions for RNA: YCR028C-A

RIM1, Transcript of ssDNA-binding protein essential for mitochondrial genome maintenance, yeastyeast

Gene RIM1, Length 408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RIM1YCR028C-A MAL31P38156 614 aa4.31□□□□□ -1.72
RIM1YCR028C-A TDA3P38758 523 aa4.31□□□□□ -1.72
RIM1YCR028C-A LYS9P38999 446 aa4.31□□□□□ -1.72
RIM1YCR028C-A YNL195CP40168 261 aa4.31□□□□□ -1.72
RIM1YCR028C-A GID8P40208 455 aa4.31□□□□□ -1.72
RIM1YCR028C-A YJR039WP47107 1121 aa4.31□□□□□ -1.72
RIM1YCR028C-A UBA2P52488 636 aa4.31□□□□□ -1.72
RIM1YCR028C-A TIM44Q01852 431 aa4.31□□□□□ -1.72
RIM1YCR028C-A UME1Q03010 460 aa4.31□□□□□ -1.72
RIM1YCR028C-A MTQ2Q03920 221 aaPredicted RBP4.31□□□□□ -1.72
RIM1YCR028C-A OMS1Q06668 471 aa4.31□□□□□ -1.72
RIM1YCR028C-A PYC1P11154 1178 aaKnown RBP4.3□□□□□ -1.72
RIM1YCR028C-A MVD1P32377 396 aaKnown RBP4.3□□□□□ -1.72
RIM1YCR028C-A YKR075CP36155 307 aa4.3□□□□□ -1.72
RIM1YCR028C-A YHL017WP38745 532 aa4.3□□□□□ -1.72
RIM1YCR028C-A CCT3P39077 534 aaKnown RBP4.3□□□□□ -1.72
RIM1YCR028C-A NUP60P39705 539 aa4.3□□□□□ -1.72
RIM1YCR028C-A FMP52P40008 231 aa4.3□□□□□ -1.72
RIM1YCR028C-A NUG1P40010 520 aaKnown RBP4.3□□□□□ -1.72
RIM1YCR028C-A DIA2Q08496 732 aaPredicted RBP4.3□□□□□ -1.72
RIM1YCR028C-A MCH5Q08777 521 aa4.3□□□□□ -1.72
RIM1YCR028C-A NUP145P49687 1317 aa4.29□□□□□ -1.72
RIM1YCR028C-A HIR1P32479 840 aa4.29□□□□□ -1.72
RIM1YCR028C-A CBR1P38626 284 aaKnown RBP4.29□□□□□ -1.72
RIM1YCR028C-A PCL5P38794 229 aa4.29□□□□□ -1.72
RIM1YCR028C-A SFB3P38810 929 aa4.29□□□□□ -1.72
RIM1YCR028C-A FMO1P38866 432 aa4.29□□□□□ -1.72
RIM1YCR028C-A RET2P43621 546 aa4.29□□□□□ -1.72
RIM1YCR028C-A NOP9P47077 666 aaKnown RBP4.29□□□□□ -1.72
RIM1YCR028C-A YGR237CP50089 785 aa4.29□□□□□ -1.72
RIM1YCR028C-A RIA1P53893 1110 aa4.29□□□□□ -1.72
RIM1YCR028C-A TMN2Q04562 672 aa4.29□□□□□ -1.72
RIM1YCR028C-A HBT1Q07653 1046 aaKnown RBP4.29□□□□□ -1.72
RIM1YCR028C-A VHS3Q08438 674 aa4.29□□□□□ -1.72
RIM1YCR028C-A SGO1Q08490 590 aa4.29□□□□□ -1.72
RIM1YCR028C-A ZRT2Q12436 422 aa4.29□□□□□ -1.72
RIM1YCR028C-A PEX1P24004 1043 aa4.28□□□□□ -1.72
RIM1YCR028C-A BEM4P39011 633 aa4.28□□□□□ -1.72
RIM1YCR028C-A GET2P40056 285 aa4.28□□□□□ -1.72
RIM1YCR028C-A PAN2P53010 1115 aaPredicted RBP4.28□□□□□ -1.72
RIM1YCR028C-A SSL2Q00578 843 aa4.28□□□□□ -1.72
RIM1YCR028C-A YMR210WQ03649 449 aa4.28□□□□□ -1.72
RIM1YCR028C-A HMO1Q03973 246 aaKnown RBP4.28□□□□□ -1.72
RIM1YCR028C-A HFD1Q04458 532 aa4.28□□□□□ -1.72
RIM1YCR028C-A RGC1Q06108 1083 aaKnown RBP4.28□□□□□ -1.72
RIM1YCR028C-A YTM1Q12024 460 aaPredicted RBP4.28□□□□□ -1.72
RIM1YCR028C-A YKL033W-AQ86ZR7 236 aa4.28□□□□□ -1.72
RIM1YCR028C-A ECM3Q99252 613 aa4.28□□□□□ -1.72
RIM1YCR028C-A CCT5P40413 562 aaKnown RBP4.27□□□□□ -1.73
RIM1YCR028C-A GPP1P41277 250 aaKnown RBP4.27□□□□□ -1.73
RIM1YCR028C-A RSC8P43609 557 aaKnown RBP4.27□□□□□ -1.73
RIM1YCR028C-A YGR153WP48238 217 aa4.27□□□□□ -1.73
RIM1YCR028C-A TEL2P53038 688 aa4.27□□□□□ -1.73
RIM1YCR028C-A GPG1P53130 126 aa4.27□□□□□ -1.73
RIM1YCR028C-A GND2P53319 492 aa4.27□□□□□ -1.73
RIM1YCR028C-A YLR407WQ06070 228 aa4.27□□□□□ -1.73
RIM1YCR028C-A FAP7Q12055 197 aaPredicted RBP4.27□□□□□ -1.73
RIM1YCR028C-A SIR3P06701 978 aa4.26□□□□□ -1.73
RIM1YCR028C-A HRB1P38922 454 aaKnown RBP RIP-Chip data4.26□□□□□ -1.73not detected
RIM1YCR028C-A GZF3P42944 551 aaKnown RBP4.26□□□□□ -1.73
RIM1YCR028C-A YAP1802P53309 568 aa4.26□□□□□ -1.73
RIM1YCR028C-A ECM9Q02202 377 aa4.26□□□□□ -1.73
RIM1YCR028C-A RPS21BQ3E754 87 aaKnown RBP4.26□□□□□ -1.73
RIM1YCR028C-A TCB3Q03640 1545 aaKnown RBP4.26□□□□□ -1.73
RIM1YCR028C-A FRS1P15624 595 aaKnown RBP4.25□□□□□ -1.73
RIM1YCR028C-A IMG2P25642 146 aaPredicted RBP4.25□□□□□ -1.73
RIM1YCR028C-A YKU70P32807 602 aa4.25□□□□□ -1.73
RIM1YCR028C-A MTH1P35198 433 aa4.25□□□□□ -1.73
RIM1YCR028C-A UBP12P39538 1254 aa4.25□□□□□ -1.73
RIM1YCR028C-A OAF1P39720 1047 aaPredicted RBP4.25□□□□□ -1.73
RIM1YCR028C-A YGL081WP53156 320 aa4.25□□□□□ -1.73
RIM1YCR028C-A MLH3Q12083 715 aa4.25□□□□□ -1.73
RIM1YCR028C-A SEC15P22224 910 aa4.24□□□□□ -1.73
RIM1YCR028C-A SEC65P29478 273 aa4.24□□□□□ -1.73
RIM1YCR028C-A PET127P32606 800 aa4.24□□□□□ -1.73
RIM1YCR028C-A BCS1P32839 456 aa4.24□□□□□ -1.73
RIM1YCR028C-A PHO11P35842 467 aa4.24□□□□□ -1.73
RIM1YCR028C-A PHO12P38693 467 aa4.24□□□□□ -1.73
RIM1YCR028C-A HXT6P39003 570 aaKnown RBP4.24□□□□□ -1.73
RIM1YCR028C-A HXT7P39004 570 aa4.24□□□□□ -1.73
RIM1YCR028C-A MNN11P46985 422 aaKnown RBP4.24□□□□□ -1.73
RIM1YCR028C-A YHM2Q04013 314 aa4.24□□□□□ -1.73
RIM1YCR028C-A VPS36Q06696 566 aa4.24□□□□□ -1.73
RIM1YCR028C-A IRC10Q08118 586 aa4.24□□□□□ -1.73
RIM1YCR028C-A ERG20P08524 352 aaKnown RBP4.23□□□□□ -1.73
RIM1YCR028C-A SWI6P09959 803 aa4.23□□□□□ -1.73
RIM1YCR028C-A CDC43P18898 376 aa4.23□□□□□ -1.73
RIM1YCR028C-A DID4P36108 232 aa4.23□□□□□ -1.73
RIM1YCR028C-A YEN1P40028 759 aa4.23□□□□□ -1.73
RIM1YCR028C-A PIG2P40187 538 aa4.23□□□□□ -1.73
RIM1YCR028C-A SDS3P40505 327 aa4.23□□□□□ -1.73
RIM1YCR028C-A STU2P46675 888 aa4.23□□□□□ -1.73
RIM1YCR028C-A CTR1P49573 406 aa4.23□□□□□ -1.73
RIM1YCR028C-A VBA4Q04602 768 aaKnown RBP4.23□□□□□ -1.73
RIM1YCR028C-A THI22Q06490 572 aa4.23□□□□□ -1.73
RIM1YCR028C-A MRH1Q12117 320 aaPredicted RBP4.23□□□□□ -1.73
RIM1YCR028C-A POM34Q12445 299 aa4.23□□□□□ -1.73
RIM1YCR028C-A KIN3P22209 435 aa4.22□□□□□ -1.73
RIM1YCR028C-A YPT7P32939 208 aa4.22□□□□□ -1.73
RIM1YCR028C-A BIT2P38346 545 aa4.22□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 32.4 ms