RNA–Protein interactions for RNA: YBR109C

CMD1, Transcript of Calmodulin, yeast

Gene CMD1, Length 444 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMD1	YBR109C	YLR149C	Q99296	730 aa		4.07	□□□□□ -1.76
CMD1	YBR109C	SEC7	P11075	2009 aa	Known RBP	4.07	□□□□□ -1.76
CMD1	YBR109C	YSP2	Q06681	1438 aa		4.06	□□□□□ -1.76
CMD1	YBR109C	RAV1	P47104	1357 aa		4.06	□□□□□ -1.76
CMD1	YBR109C	RPP2A	P05319	106 aa	Known RBP	4.06	□□□□□ -1.76
CMD1	YBR109C	CDC20	P26309	610 aa		4.06	□□□□□ -1.76
CMD1	YBR109C	PRP19	P32523	503 aa	Known RBP	4.06	□□□□□ -1.76
CMD1	YBR109C	YKR051W	P36142	418 aa		4.06	□□□□□ -1.76
CMD1	YBR109C	YHR078W	P38799	552 aa		4.06	□□□□□ -1.76
CMD1	YBR109C	CKB2	P38930	258 aa		4.06	□□□□□ -1.76
CMD1	YBR109C	AIM21	P40563	679 aa		4.06	□□□□□ -1.76
CMD1	YBR109C	BNA2	P47125	453 aa		4.06	□□□□□ -1.76
CMD1	YBR109C	NPY1	P53164	384 aa		4.06	□□□□□ -1.76
CMD1	YBR109C	YAP6	Q03935	383 aa		4.06	□□□□□ -1.76
CMD1	YBR109C	PDS5	Q04264	1277 aa		4.06	□□□□□ -1.76
CMD1	YBR109C	URN1	Q06525	465 aa	Known RBP	4.06	□□□□□ -1.76
CMD1	YBR109C	RXT3	Q07458	294 aa		4.06	□□□□□ -1.76
CMD1	YBR109C	TMA17	Q12513	150 aa		4.06	□□□□□ -1.76
CMD1	YBR109C	Q0142	Q9ZZW4	58 aa		4.06	□□□□□ -1.76
CMD1	YBR109C	SPO14	P36126	1683 aa		4.06	□□□□□ -1.76
CMD1	YBR109C	YOR093C	Q12275	1648 aa		4.06	□□□□□ -1.76
CMD1	YBR109C	TY3B-I	Q7LHG5	1498 aa	Known RBP	4.05	□□□□□ -1.76
CMD1	YBR109C	HCM1	P25364	564 aa		4.05	□□□□□ -1.76
CMD1	YBR109C	SED4	P25365	1065 aa		4.05	□□□□□ -1.76
CMD1	YBR109C	YFL052W	P43551	465 aa		4.05	□□□□□ -1.76
CMD1	YBR109C	SSY5	P47002	699 aa		4.05	□□□□□ -1.76
CMD1	YBR109C	NCS6	P53088	359 aa		4.05	□□□□□ -1.76
CMD1	YBR109C	HFD1	Q04458	532 aa		4.05	□□□□□ -1.76
CMD1	YBR109C	RPN7	Q06103	429 aa	Known RBP	4.05	□□□□□ -1.76
CMD1	YBR109C	ACK1	Q07622	623 aa	Predicted RBP	4.05	□□□□□ -1.76
CMD1	YBR109C	NOP12	Q08208	459 aa	Known RBP	4.05	□□□□□ -1.76
CMD1	YBR109C	LTE1	P07866	1435 aa		4.04	□□□□□ -1.76
CMD1	YBR109C	MRC1	P25588	1096 aa		4.04	□□□□□ -1.76
CMD1	YBR109C	PMI40	P29952	429 aa	Known RBP	4.04	□□□□□ -1.76
CMD1	YBR109C	YJR120W	P47157	116 aa		4.04	□□□□□ -1.76
CMD1	YBR109C	CDC45	Q08032	650 aa		4.04	□□□□□ -1.76
CMD1	YBR109C	TRM3	Q07527	1436 aa		4.04	□□□□□ -1.76
CMD1	YBR109C	CHC1	P22137	1653 aa	Known RBP	4.03	□□□□□ -1.76
CMD1	YBR109C	SEC21	P32074	935 aa	Known RBP	4.03	□□□□□ -1.76
CMD1	YBR109C	YKR018C	P36114	725 aa		4.03	□□□□□ -1.76
CMD1	YBR109C	OAF1	P39720	1047 aa	Predicted RBP	4.03	□□□□□ -1.76
CMD1	YBR109C	VPS27	P40343	622 aa	Known RBP	4.03	□□□□□ -1.76
CMD1	YBR109C	GZF3	P42944	551 aa	Known RBP	4.03	□□□□□ -1.76
CMD1	YBR109C	FOL1	P53848	824 aa		4.03	□□□□□ -1.76
CMD1	YBR109C	ASI2	P53895	289 aa		4.03	□□□□□ -1.76
CMD1	YBR109C	ASM4	Q05166	528 aa		4.03	□□□□□ -1.76
CMD1	YBR109C	YTM1	Q12024	460 aa	Predicted RBP	4.03	□□□□□ -1.76
CMD1	YBR109C	GPR1	Q12361	961 aa		4.03	□□□□□ -1.76
CMD1	YBR109C	NPC2	Q12408	173 aa		4.03	□□□□□ -1.76
CMD1	YBR109C	KCS1	Q12494	1050 aa		4.03	□□□□□ -1.76
CMD1	YBR109C	TUB3	P09734	445 aa	Known RBP	4.02	□□□□□ -1.77
CMD1	YBR109C	PRP4	P20053	465 aa	Known RBP	4.02	□□□□□ -1.77
CMD1	YBR109C	EUG1	P32474	517 aa		4.02	□□□□□ -1.77
CMD1	YBR109C	TAF5	P38129	798 aa		4.02	□□□□□ -1.77
CMD1	YBR109C	SAK1	P38990	1142 aa		4.02	□□□□□ -1.77
CMD1	YBR109C	MSS4	P38994	779 aa		4.02	□□□□□ -1.77
CMD1	YBR109C	PLB1	P39105	664 aa		4.02	□□□□□ -1.77
CMD1	YBR109C	RET2	P43621	546 aa		4.02	□□□□□ -1.77
CMD1	YBR109C	YGR153W	P48238	217 aa		4.02	□□□□□ -1.77
CMD1	YBR109C	PCL10	P53124	433 aa		4.02	□□□□□ -1.77
CMD1	YBR109C	SLU7	Q02775	382 aa	Known RBP	4.02	□□□□□ -1.77
CMD1	YBR109C	MUS81	Q04149	632 aa	Predicted RBP	4.02	□□□□□ -1.77
CMD1	YBR109C	YLR224W	Q05947	369 aa		4.02	□□□□□ -1.77
CMD1	YBR109C	NTO1	Q12311	748 aa		4.02	□□□□□ -1.77
CMD1	YBR109C	MNN4	P36044	1178 aa		4.01	□□□□□ -1.77
CMD1	YBR109C	YBR071W	P38243	211 aa		4.01	□□□□□ -1.77
CMD1	YBR109C	TDA3	P38758	523 aa		4.01	□□□□□ -1.77
CMD1	YBR109C	PZF1	P39933	429 aa		4.01	□□□□□ -1.77
CMD1	YBR109C	CCT5	P40413	562 aa	Known RBP	4.01	□□□□□ -1.77
CMD1	YBR109C	VHR1	P40522	640 aa		4.01	□□□□□ -1.77
CMD1	YBR109C	PFA3	P42836	336 aa		4.01	□□□□□ -1.77
CMD1	YBR109C	MTR3	P48240	250 aa	Predicted RBP	4.01	□□□□□ -1.77
CMD1	YBR109C	ARP4	P80428	489 aa		4.01	□□□□□ -1.77
CMD1	YBR109C	ECM9	Q02202	377 aa		4.01	□□□□□ -1.77
CMD1	YBR109C	DCS2	Q12123	353 aa		4.01	□□□□□ -1.77
CMD1	YBR109C	YRF1-1	P0CX20	1796 aa		4	□□□□□ -1.77
CMD1	YBR109C	YRF1-5	P0CX21	1796 aa		4	□□□□□ -1.77
CMD1	YBR109C	YRF1-8	P0CX22	1796 aa		4	□□□□□ -1.77
CMD1	YBR109C	MIP6	P38760	659 aa	Known RBP	4	□□□□□ -1.77
CMD1	YBR109C	MNN11	P46985	422 aa	Known RBP	4	□□□□□ -1.77
CMD1	YBR109C	EAF7	P53911	425 aa	Known RBP	4	□□□□□ -1.77
CMD1	YBR109C	COG6	P53959	839 aa		4	□□□□□ -1.77
CMD1	YBR109C	TRE2	Q08693	809 aa		4	□□□□□ -1.77
CMD1	YBR109C	SWM1	Q12379	170 aa		4	□□□□□ -1.77
CMD1	YBR109C	MLP1	Q02455	1875 aa	Known RBP	4	□□□□□ -1.77
CMD1	YBR109C	YLR415C	O13578	112 aa		3.99	□□□□□ -1.77
CMD1	YBR109C	KAR4	P25583	335 aa		3.99	□□□□□ -1.77
CMD1	YBR109C	LST4	P34239	828 aa		3.99	□□□□□ -1.77
CMD1	YBR109C	HXT6	P39003	570 aa	Known RBP	3.99	□□□□□ -1.77
CMD1	YBR109C	HXT7	P39004	570 aa		3.99	□□□□□ -1.77
CMD1	YBR109C	DUG1	P43616	481 aa	Known RBP	3.99	□□□□□ -1.77
CMD1	YBR109C	YJR039W	P47107	1121 aa		3.99	□□□□□ -1.77
CMD1	YBR109C	PEX19	Q07418	342 aa		3.99	□□□□□ -1.77
CMD1	YBR109C	DRS2	P39524	1355 aa		3.99	□□□□□ -1.77
CMD1	YBR109C	VMR1	P38735	1592 aa		3.98	□□□□□ -1.77
CMD1	YBR109C	IML1	P47170	1584 aa		3.98	□□□□□ -1.77
CMD1	YBR109C	NUP188	P52593	1655 aa	Known RBP	3.98	□□□□□ -1.77
CMD1	YBR109C	SPE2	P21182	396 aa		3.98	□□□□□ -1.77
CMD1	YBR109C	STE11	P23561	717 aa		3.98	□□□□□ -1.77
CMD1	YBR109C	DID4	P36108	232 aa		3.98	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 35.5 ms