RNA–Protein interactions for RNA: YBR106W

PHO88, Transcript of Probable membrane protein, yeast

Gene PHO88, Length 567 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PHO88	YBR106W	NOP12	Q08208	459 aa	Known RBP	4.06	□□□□□ -1.76
PHO88	YBR106W	DIA2	Q08496	732 aa	Predicted RBP	4.06	□□□□□ -1.76
PHO88	YBR106W	UPC2	Q12151	913 aa		4.06	□□□□□ -1.76
PHO88	YBR106W	RIB2	Q12362	591 aa	Known RBP	4.06	□□□□□ -1.76
PHO88	YBR106W	PIF1	P07271	859 aa		4.05	□□□□□ -1.76
PHO88	YBR106W	GCD1	P09032	578 aa	Predicted RBP	4.05	□□□□□ -1.76
PHO88	YBR106W	RPS21A	P0C0V8	87 aa	Known RBP	4.05	□□□□□ -1.76
PHO88	YBR106W	APL2	P36000	726 aa	Predicted RBP	4.05	□□□□□ -1.76
PHO88	YBR106W	LAM1	P38851	1228 aa		4.05	□□□□□ -1.76
PHO88	YBR106W	PXA1	P41909	870 aa		4.05	□□□□□ -1.76
PHO88	YBR106W	QRI7	P43122	407 aa		4.05	□□□□□ -1.76
PHO88	YBR106W	IML2	P47031	731 aa		4.05	□□□□□ -1.76
PHO88	YBR106W	PUS4	P48567	403 aa	Known RBP	4.05	□□□□□ -1.76
PHO88	YBR106W	PRP31	P49704	494 aa	Predicted RBP	4.05	□□□□□ -1.76
PHO88	YBR106W	MDG1	P53885	366 aa		4.05	□□□□□ -1.76
PHO88	YBR106W	ASI2	P53895	289 aa		4.05	□□□□□ -1.76
PHO88	YBR106W	TRI1	Q05024	226 aa		4.05	□□□□□ -1.76
PHO88	YBR106W	VHS3	Q08438	674 aa		4.05	□□□□□ -1.76
PHO88	YBR106W	PSF3	Q12146	194 aa		4.05	□□□□□ -1.76
PHO88	YBR106W	ARP7	Q12406	477 aa		4.05	□□□□□ -1.76
PHO88	YBR106W	RPS21B	Q3E754	87 aa	Known RBP	4.05	□□□□□ -1.76
PHO88	YBR106W	SSM4	P40318	1319 aa		4.04	□□□□□ -1.76
PHO88	YBR106W	HIR3	P47171	1648 aa		4.04	□□□□□ -1.76
PHO88	YBR106W	YLR415C	O13578	112 aa		4.04	□□□□□ -1.76
PHO88	YBR106W	MSM1	P22438	575 aa		4.04	□□□□□ -1.76
PHO88	YBR106W	DAL3	P32459	195 aa		4.04	□□□□□ -1.76
PHO88	YBR106W	XRS2	P33301	854 aa		4.04	□□□□□ -1.76
PHO88	YBR106W	LRG1	P35688	1017 aa		4.04	□□□□□ -1.76
PHO88	YBR106W	MRPL36	P36531	177 aa		4.04	□□□□□ -1.76
PHO88	YBR106W	GID8	P40208	455 aa		4.04	□□□□□ -1.76
PHO88	YBR106W	RAD26	P40352	1085 aa		4.04	□□□□□ -1.76
PHO88	YBR106W	VHR1	P40522	640 aa		4.04	□□□□□ -1.76
PHO88	YBR106W	MUS81	Q04149	632 aa	Predicted RBP	4.04	□□□□□ -1.76
PHO88	YBR106W	YLR407W	Q06070	228 aa		4.04	□□□□□ -1.76
PHO88	YBR106W	ATG11	Q12527	1178 aa		4.04	□□□□□ -1.76
PHO88	YBR106W	Q0142	Q9ZZW4	58 aa		4.04	□□□□□ -1.76
PHO88	YBR106W	RPS17A	P02407	136 aa	Known RBP	4.03	□□□□□ -1.76
PHO88	YBR106W	RPS17B	P14127	136 aa	Known RBP	4.03	□□□□□ -1.76
PHO88	YBR106W	SEC15	P22224	910 aa		4.03	□□□□□ -1.76
PHO88	YBR106W	PHO3	P24031	467 aa		4.03	□□□□□ -1.76
PHO88	YBR106W	RER1	P25560	188 aa		4.03	□□□□□ -1.76
PHO88	YBR106W	DBF20	P32328	564 aa		4.03	□□□□□ -1.76
PHO88	YBR106W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.03	□□□□□ -1.76	RIP-Chip
PHO88	YBR106W	YKL222C	P35995	705 aa		4.03	□□□□□ -1.76
PHO88	YBR106W	YLF2	P38746	405 aa		4.03	□□□□□ -1.76
PHO88	YBR106W	MEF2	P39677	819 aa		4.03	□□□□□ -1.76
PHO88	YBR106W	NOC2	P39744	710 aa	Known RBP	4.03	□□□□□ -1.76
PHO88	YBR106W	BRE5	P53741	515 aa	Known RBP	4.03	□□□□□ -1.76
PHO88	YBR106W	ARG5,6	Q01217	863 aa		4.03	□□□□□ -1.76
PHO88	YBR106W	VBA4	Q04602	768 aa	Known RBP	4.03	□□□□□ -1.76
PHO88	YBR106W	BLS1	Q06071	122 aa		4.03	□□□□□ -1.76
PHO88	YBR106W	ISA1	Q07821	250 aa	Predicted RBP	4.03	□□□□□ -1.76
PHO88	YBR106W	NGL1	Q08213	363 aa	Known RBP	4.03	□□□□□ -1.76
PHO88	YBR106W	GPB1	Q08886	897 aa		4.03	□□□□□ -1.76
PHO88	YBR106W	CWC2	Q12046	339 aa	Predicted RBP	4.03	□□□□□ -1.76
PHO88	YBR106W	YOL114C	Q12322	202 aa		4.03	□□□□□ -1.76
PHO88	YBR106W	TRM11	Q12463	433 aa		4.03	□□□□□ -1.76
PHO88	YBR106W	VPS5	Q92331	675 aa		4.03	□□□□□ -1.76
PHO88	YBR106W	ERG20	P08524	352 aa	Known RBP	4.02	□□□□□ -1.77
PHO88	YBR106W	MSS18	P08593	268 aa		4.02	□□□□□ -1.77
PHO88	YBR106W	MIS1	P09440	975 aa	Known RBP	4.02	□□□□□ -1.77
PHO88	YBR106W	KIN82	P25341	720 aa		4.02	□□□□□ -1.77
PHO88	YBR106W	GFD2	P25370	566 aa	Known RBP	4.02	□□□□□ -1.77
PHO88	YBR106W	CWH43	P25618	953 aa		4.02	□□□□□ -1.77
PHO88	YBR106W	MF(ALPHA)2	P32435	120 aa		4.02	□□□□□ -1.77
PHO88	YBR106W	RPN12	P32496	274 aa		4.02	□□□□□ -1.77
PHO88	YBR106W	STE14	P32584	239 aa		4.02	□□□□□ -1.77
PHO88	YBR106W	TGL1	P34163	548 aa		4.02	□□□□□ -1.77
PHO88	YBR106W	FAT1	P38225	669 aa		4.02	□□□□□ -1.77
PHO88	YBR106W	ERP2	P39704	215 aa		4.02	□□□□□ -1.77
PHO88	YBR106W	YIL092W	P40497	633 aa		4.02	□□□□□ -1.77
PHO88	YBR106W	VID28	P40547	921 aa		4.02	□□□□□ -1.77
PHO88	YBR106W	PFA3	P42836	336 aa		4.02	□□□□□ -1.77
PHO88	YBR106W	IES1	P43579	692 aa		4.02	□□□□□ -1.77
PHO88	YBR106W	LSB3	P43603	459 aa	Known RBP	4.02	□□□□□ -1.77
PHO88	YBR106W	IRC5	P43610	853 aa		4.02	□□□□□ -1.77
PHO88	YBR106W	ECL1	P48235	211 aa		4.02	□□□□□ -1.77
PHO88	YBR106W	NCS6	P53088	359 aa		4.02	□□□□□ -1.77
PHO88	YBR106W	YMR018W	Q04364	514 aa		4.02	□□□□□ -1.77
PHO88	YBR106W	ECM38	Q05902	660 aa	Predicted RBP	4.02	□□□□□ -1.77
PHO88	YBR106W	PEX19	Q07418	342 aa		4.02	□□□□□ -1.77
PHO88	YBR106W	PEP1	P32319	1579 aa		4.02	□□□□□ -1.77
PHO88	YBR106W	VAS1	P07806	1104 aa	Known RBP	4.01	□□□□□ -1.77
PHO88	YBR106W	PYC1	P11154	1178 aa	Known RBP	4.01	□□□□□ -1.77
PHO88	YBR106W	FRS1	P15624	595 aa	Known RBP	4.01	□□□□□ -1.77
PHO88	YBR106W	TOS1	P38288	455 aa		4.01	□□□□□ -1.77
PHO88	YBR106W	SIC1	P38634	284 aa		4.01	□□□□□ -1.77
PHO88	YBR106W	KAP123	P40069	1113 aa	Known RBP	4.01	□□□□□ -1.77
PHO88	YBR106W	VID27	P40157	782 aa		4.01	□□□□□ -1.77
PHO88	YBR106W	AMA1	P50082	593 aa		4.01	□□□□□ -1.77
PHO88	YBR106W	GTF1	P53260	183 aa	Predicted RBP	4.01	□□□□□ -1.77
PHO88	YBR106W	ARP4	P80428	489 aa		4.01	□□□□□ -1.77
PHO88	YBR106W	ROT1	Q03691	256 aa		4.01	□□□□□ -1.77
PHO88	YBR106W	CTK1	Q03957	528 aa	Known RBP	4.01	□□□□□ -1.77
PHO88	YBR106W	HLR1	Q04429	423 aa		4.01	□□□□□ -1.77
PHO88	YBR106W	GAD1	Q04792	585 aa		4.01	□□□□□ -1.77
PHO88	YBR106W	COG4	Q06096	861 aa		4.01	□□□□□ -1.77
PHO88	YBR106W	ACK1	Q07622	623 aa	Predicted RBP	4.01	□□□□□ -1.77
PHO88	YBR106W	SGO1	Q08490	590 aa		4.01	□□□□□ -1.77
PHO88	YBR106W	HMI1	Q12039	706 aa		4.01	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 118.4 ms