RNA–Protein interactions for RNA: YBR073W

RDH54, Transcript of DNA-dependent ATPase, yeast

Gene RDH54, Length 2,877 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RDH54	YBR073W	TOF1	P53840	1238 aa		4.38	□□□□□ -1.71
RDH54	YBR073W	CNM67	P53865	581 aa	Known RBP	4.38	□□□□□ -1.71
RDH54	YBR073W	GIM3	P53900	129 aa		4.38	□□□□□ -1.71
RDH54	YBR073W	VPS9	P54787	451 aa		4.38	□□□□□ -1.71
RDH54	YBR073W	SPO75	Q07798	868 aa		4.38	□□□□□ -1.71
RDH54	YBR073W	WTM2	Q12206	467 aa		4.38	□□□□□ -1.71
RDH54	YBR073W	YOL114C	Q12322	202 aa		4.38	□□□□□ -1.71
RDH54	YBR073W	STE3	P06783	470 aa		4.37	□□□□□ -1.71
RDH54	YBR073W	LAT1	P12695	482 aa	Known RBP	4.37	□□□□□ -1.71
RDH54	YBR073W	AEP2	P22136	580 aa		4.37	□□□□□ -1.71
RDH54	YBR073W	CAD1	P24813	409 aa	Known RBP	4.37	□□□□□ -1.71
RDH54	YBR073W	NTG1	P31378	399 aa		4.37	□□□□□ -1.71
RDH54	YBR073W	IRE1	P32361	1115 aa		4.37	□□□□□ -1.71
RDH54	YBR073W	GYP6	P32806	458 aa		4.37	□□□□□ -1.71
RDH54	YBR073W	IRS4	P36115	615 aa	Known RBP	4.37	□□□□□ -1.71
RDH54	YBR073W	MSR1	P38714	643 aa		4.37	□□□□□ -1.71
RDH54	YBR073W	YMR124W	P39523	943 aa	Known RBP	4.37	□□□□□ -1.71
RDH54	YBR073W	ALD5	P40047	520 aa	Known RBP	4.37	□□□□□ -1.71
RDH54	YBR073W	MET18	P40469	1032 aa		4.37	□□□□□ -1.71
RDH54	YBR073W	YMR155W	Q03795	547 aa		4.37	□□□□□ -1.71
RDH54	YBR073W	EAF1	Q06337	982 aa		4.37	□□□□□ -1.71
RDH54	YBR073W	TY3A-G	Q12173	290 aa		4.37	□□□□□ -1.71
RDH54	YBR073W	TAH18	Q12181	623 aa		4.37	□□□□□ -1.71
RDH54	YBR073W	TY3A-I	Q99219	290 aa		4.37	□□□□□ -1.71
RDH54	YBR073W	THO2	P53552	1597 aa	Known RBP	4.37	□□□□□ -1.71
RDH54	YBR073W	ARG80	P07249	177 aa		4.37	□□□□□ -1.71
RDH54	YBR073W	NCP1	P16603	691 aa	Known RBP	4.37	□□□□□ -1.71
RDH54	YBR073W	FUR1	P18562	216 aa	Known RBP	4.37	□□□□□ -1.71
RDH54	YBR073W	ADH5	P38113	351 aa	Known RBP	4.37	□□□□□ -1.71
RDH54	YBR073W	YHL008C	P38750	627 aa		4.37	□□□□□ -1.71
RDH54	YBR073W	RTS1	P38903	757 aa		4.37	□□□□□ -1.71
RDH54	YBR073W	ALG2	P43636	503 aa		4.37	□□□□□ -1.71
RDH54	YBR073W	HOS3	Q02959	697 aa	Known RBP	4.37	□□□□□ -1.71
RDH54	YBR073W	HLR1	Q04429	423 aa		4.37	□□□□□ -1.71
RDH54	YBR073W	ECM18	Q04623	453 aa		4.37	□□□□□ -1.71
RDH54	YBR073W	ADE13	Q05911	482 aa	Known RBP	4.37	□□□□□ -1.71
RDH54	YBR073W	RTT10	Q08924	1013 aa		4.37	□□□□□ -1.71
RDH54	YBR073W	AVL9	Q12500	764 aa		4.37	□□□□□ -1.71
RDH54	YBR073W	PAR32	Q12515	295 aa	Known RBP	4.37	□□□□□ -1.71
RDH54	YBR073W	HBN1	Q96VH4	193 aa		4.37	□□□□□ -1.71
RDH54	YBR073W	YOR019W	Q99248	730 aa		4.37	□□□□□ -1.71
RDH54	YBR073W	SRD1	P09007	221 aa		4.36	□□□□□ -1.71
RDH54	YBR073W	MTF2	P10849	440 aa		4.36	□□□□□ -1.71
RDH54	YBR073W	HMG1	P12683	1054 aa		4.36	□□□□□ -1.71
RDH54	YBR073W	ADE2	P21264	571 aa	Known RBP	4.36	□□□□□ -1.71
RDH54	YBR073W	DAL7	P21826	554 aa		4.36	□□□□□ -1.71
RDH54	YBR073W	BAS1	P22035	811 aa		4.36	□□□□□ -1.71
RDH54	YBR073W	SIS1	P25294	352 aa	Known RBP	4.36	□□□□□ -1.71
RDH54	YBR073W	DMC1	P25453	334 aa		4.36	□□□□□ -1.71
RDH54	YBR073W	VPS17	P32913	551 aa		4.36	□□□□□ -1.71
RDH54	YBR073W	SUR1	P33300	382 aa		4.36	□□□□□ -1.71
RDH54	YBR073W	MSG5	P38590	489 aa		4.36	□□□□□ -1.71
RDH54	YBR073W	RIX1	P38883	763 aa	Predicted RBP	4.36	□□□□□ -1.71
RDH54	YBR073W	GEM1	P39722	662 aa		4.36	□□□□□ -1.71
RDH54	YBR073W	PEX25	Q02969	394 aa		4.36	□□□□□ -1.71
RDH54	YBR073W	YAP6	Q03935	383 aa		4.36	□□□□□ -1.71
RDH54	YBR073W	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	4.36	□□□□□ -1.71	not detected
RDH54	YBR073W	NBA1	Q08229	501 aa	Known RBP	4.36	□□□□□ -1.71
RDH54	YBR073W	CKA1	P15790	372 aa		4.36	□□□□□ -1.71
RDH54	YBR073W	ITR1	P30605	584 aa		4.36	□□□□□ -1.71
RDH54	YBR073W	RPN2	P32565	945 aa	Known RBP	4.36	□□□□□ -1.71
RDH54	YBR073W	ABD1	P32783	436 aa	Predicted RBP	4.36	□□□□□ -1.71
RDH54	YBR073W	PBY1	P38254	753 aa		4.36	□□□□□ -1.71
RDH54	YBR073W	BIT2	P38346	545 aa		4.36	□□□□□ -1.71
RDH54	YBR073W	SEC28	P40509	296 aa	Known RBP	4.36	□□□□□ -1.71
RDH54	YBR073W	GCN20	P43535	752 aa	Known RBP	4.36	□□□□□ -1.71
RDH54	YBR073W	HAL9	Q12180	1030 aa		4.36	□□□□□ -1.71
RDH54	YBR073W	FRE6	Q12473	712 aa		4.36	□□□□□ -1.71
RDH54	YBR073W	LEU1	P07264	779 aa	Known RBP	4.35	□□□□□ -1.71
RDH54	YBR073W	CDC16	P09798	840 aa		4.35	□□□□□ -1.71
RDH54	YBR073W	SPB1	P25582	841 aa	Predicted RBP	4.35	□□□□□ -1.71
RDH54	YBR073W	VBA3	P25594	458 aa		4.35	□□□□□ -1.71
RDH54	YBR073W	MDL1	P33310	695 aa		4.35	□□□□□ -1.71
RDH54	YBR073W	SHM1	P37292	490 aa	Predicted RBP	4.35	□□□□□ -1.71
RDH54	YBR073W	YHR054C	P38780	354 aa		4.35	□□□□□ -1.71
RDH54	YBR073W	HXT6	P39003	570 aa	Known RBP	4.35	□□□□□ -1.71
RDH54	YBR073W	HXT7	P39004	570 aa		4.35	□□□□□ -1.71
RDH54	YBR073W	PIB2	P53191	635 aa		4.35	□□□□□ -1.71
RDH54	YBR073W	CPR6	P53691	371 aa	Known RBP	4.35	□□□□□ -1.71
RDH54	YBR073W	ECM9	Q02202	377 aa		4.35	□□□□□ -1.71
RDH54	YBR073W	ATG26	Q06321	1198 aa		4.35	□□□□□ -1.71
RDH54	YBR073W	TGL5	Q12043	749 aa		4.35	□□□□□ -1.71
RDH54	YBR073W	TGS1	Q12052	315 aa		4.35	□□□□□ -1.71
RDH54	YBR073W	CHS5	Q12114	671 aa	Known RBP	4.35	□□□□□ -1.71
RDH54	YBR073W	YPL066W	Q12194	479 aa		4.35	□□□□□ -1.71
RDH54	YBR073W	SRN2	Q99176	213 aa		4.35	□□□□□ -1.71
RDH54	YBR073W	GUK1	P15454	187 aa	Known RBP	4.35	□□□□□ -1.71
RDH54	YBR073W	HOP1	P20050	605 aa		4.35	□□□□□ -1.71
RDH54	YBR073W	SUI2	P20459	304 aa	Known RBP	4.35	□□□□□ -1.71
RDH54	YBR073W	ADK2	P26364	225 aa		4.35	□□□□□ -1.71
RDH54	YBR073W	MLF3	P32047	452 aa		4.35	□□□□□ -1.71
RDH54	YBR073W	DPH5	P32469	300 aa	Predicted RBP	4.35	□□□□□ -1.71
RDH54	YBR073W	YSW1	P38280	609 aa		4.35	□□□□□ -1.71
RDH54	YBR073W	PCM1	P38628	557 aa	Known RBP	4.35	□□□□□ -1.71
RDH54	YBR073W	SPT8	P38915	602 aa		4.35	□□□□□ -1.71
RDH54	YBR073W	QDR2	P40474	542 aa		4.35	□□□□□ -1.71
RDH54	YBR073W	KRE33	P53914	1056 aa	Known RBP	4.35	□□□□□ -1.71
RDH54	YBR073W	UBP2	Q01476	1272 aa		4.35	□□□□□ -1.71
RDH54	YBR073W	ECM38	Q05902	660 aa	Predicted RBP	4.35	□□□□□ -1.71
RDH54	YBR073W	ECM22	Q05958	814 aa	Predicted RBP	4.35	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms