RNA–Protein interactions for RNA: ENST00000621973.1

DDX1-208, Transcript of DEAD-box helicase 1, humanhuman

TSL 5 BASIC

Gene DDX1, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-208ENST00000621973 NIF3L1Q9GZT8 377 aa8.04□□□□□ -1.12
DDX1-208ENST00000621973 SAP130Q9H0E3 1048 aa8.04□□□□□ -1.12
DDX1-208ENST00000621973 ARNT2Q9HBZ2 717 aa8.04□□□□□ -1.12
DDX1-208ENST00000621973 SIRPGQ9P1W8 387 aa8.04□□□□□ -1.12
DDX1-208ENST00000621973 PRDM15P57071 1507 aaPredicted RBP8.04□□□□□ -1.12
DDX1-208ENST00000621973 LRPPRCP42704 1394 aaKnown RBP8.04□□□□□ -1.12
DDX1-208ENST00000621973 MAGEB6P1A0A0J9YX57 407 aa8.04□□□□□ -1.12
DDX1-208ENST00000621973 POU3F3P20264 500 aaPredicted RBP8.04□□□□□ -1.12
DDX1-208ENST00000621973 EIF1AXP47813 144 aaKnown RBP8.04□□□□□ -1.12
DDX1-208ENST00000621973 RNF20Q5VTR2 975 aa8.04□□□□□ -1.12
DDX1-208ENST00000621973 HNRNPLLQ8WVV9 542 aaKnown RBP8.04□□□□□ -1.12
DDX1-208ENST00000621973 ALKBH8Q96BT7 664 aaKnown RBP8.04□□□□□ -1.12
DDX1-208ENST00000621973 CITED4Q96RK1 184 aa8.04□□□□□ -1.12
DDX1-208ENST00000621973 HPS5Q9UPZ3 1129 aa8.04□□□□□ -1.12
DDX1-208ENST00000621973 V9GY48 417 aaPredicted RBP8.04□□□□□ -1.12
DDX1-208ENST00000621973 SPAG9O60271 1321 aaKnown RBP8.03□□□□□ -1.12
DDX1-208ENST00000621973 KIF3BO15066 747 aa8.03□□□□□ -1.12
DDX1-208ENST00000621973 SSBP05455 408 aaKnown RBP eCLIP8.03□□□□□ -1.12
DDX1-208ENST00000621973 USP4Q13107 963 aa8.03□□□□□ -1.12
DDX1-208ENST00000621973 RAB33AQ14088 237 aa8.03□□□□□ -1.12
DDX1-208ENST00000621973 C10orf62Q5T681 223 aaPredicted RBP8.03□□□□□ -1.12
DDX1-208ENST00000621973 RELTQ969Z4 430 aa8.03□□□□□ -1.12
DDX1-208ENST00000621973 NUDCQ9Y266 331 aa8.03□□□□□ -1.12
DDX1-208ENST00000621973 AK5Q9Y6K8 562 aa8.03□□□□□ -1.12
DDX1-208ENST00000621973 SOWAHBA6NEL2 793 aa8.03□□□□□ -1.12
DDX1-208ENST00000621973 CNGB1Q14028 1251 aaPredicted RBP8.03□□□□□ -1.12
DDX1-208ENST00000621973 ERFEQ4G0M1 354 aa8.03□□□□□ -1.12
DDX1-208ENST00000621973 ARSHQ5FYA8 562 aa8.03□□□□□ -1.12
DDX1-208ENST00000621973 PTCRAQ6ISU1 281 aaPredicted RBP8.03□□□□□ -1.12
DDX1-208ENST00000621973 ZNF280DQ6N043 979 aa8.03□□□□□ -1.12
DDX1-208ENST00000621973 TESK2Q96S53 571 aa8.03□□□□□ -1.12
DDX1-208ENST00000621973 TRIM55Q9BYV6 548 aa8.03□□□□□ -1.12
DDX1-208ENST00000621973 COPRSQ9NQ92 184 aa8.03□□□□□ -1.12
DDX1-208ENST00000621973 KLF15Q9UIH9 416 aa8.03□□□□□ -1.12
DDX1-208ENST00000621973 COL17A1Q9UMD9 1497 aaPredicted RBP8.02□□□□□ -1.13
DDX1-208ENST00000621973 RNF123Q5XPI4 1314 aa8.02□□□□□ -1.13
DDX1-208ENST00000621973 WASHC2CQ9Y4E1 1318 aa8.02□□□□□ -1.13
DDX1-208ENST00000621973 M0R2N6 131 aa8.02□□□□□ -1.13
DDX1-208ENST00000621973 LIG1P18858 919 aa8.02□□□□□ -1.13
DDX1-208ENST00000621973 MEI1Q5TIA1 1274 aa8.02□□□□□ -1.13
DDX1-208ENST00000621973 ANKK1Q8NFD2 765 aa8.02□□□□□ -1.13
DDX1-208ENST00000621973 COL26A1Q96A83 441 aa8.02□□□□□ -1.13
DDX1-208ENST00000621973 STAC3Q96MF2 364 aa8.02□□□□□ -1.13
DDX1-208ENST00000621973 PARD3Q8TEW0 1356 aa8.02□□□□□ -1.13
DDX1-208ENST00000621973 PTPRTO14522 1441 aa8.01□□□□□ -1.13
DDX1-208ENST00000621973 EPB41L2O43491 1005 aaKnown RBP8.01□□□□□ -1.13
DDX1-208ENST00000621973 PLIN1O60240 522 aa8.01□□□□□ -1.13
DDX1-208ENST00000621973 BPNT1O95861 308 aa8.01□□□□□ -1.13
DDX1-208ENST00000621973 FOSP01100 380 aaPredicted RBP8.01□□□□□ -1.13
DDX1-208ENST00000621973 NOS2P35228 1153 aa8.01□□□□□ -1.13
DDX1-208ENST00000621973 PCGF5Q86SE9 256 aa8.01□□□□□ -1.13
DDX1-208ENST00000621973 ZNF687Q8N1G0 1237 aa8.01□□□□□ -1.13
DDX1-208ENST00000621973 AFAP1Q8N556 730 aa8.01□□□□□ -1.13
DDX1-208ENST00000621973 SAMD3Q8N6K7 520 aa8.01□□□□□ -1.13
DDX1-208ENST00000621973 RASGRP4Q8TDF6 673 aa8.01□□□□□ -1.13
DDX1-208ENST00000621973 DNAJC7Q99615 494 aa8.01□□□□□ -1.13
DDX1-208ENST00000621973 ENAMQ9NRM1 1142 aa8.01□□□□□ -1.13
DDX1-208ENST00000621973 TSR3Q9UJK0 312 aaKnown RBP8.01□□□□□ -1.13
DDX1-208ENST00000621973 ZFYVE16Q7Z3T8 1539 aa8.01□□□□□ -1.13
DDX1-208ENST00000621973 NRDCO43847 1150 aa8.01□□□□□ -1.13
DDX1-208ENST00000621973 ALDH1L1O75891 902 aa8.01□□□□□ -1.13
DDX1-208ENST00000621973 SQSTM1Q13501 440 aa8.01□□□□□ -1.13
DDX1-208ENST00000621973 ALG1LQ6GMV1 187 aa8.01□□□□□ -1.13
DDX1-208ENST00000621973 CACTIN-AS1Q8N1I8 211 aa8.01□□□□□ -1.13
DDX1-208ENST00000621973 INO80BQ9C086 356 aaPredicted RBP8.01□□□□□ -1.13
DDX1-208ENST00000621973 ATP8A1Q9Y2Q0 1164 aa8.01□□□□□ -1.13
DDX1-208ENST00000621973 WDR7Q9Y4E6 1490 aa8.01□□□□□ -1.13
DDX1-208ENST00000621973 CAND2O75155 1236 aa8□□□□□ -1.13
DDX1-208ENST00000621973 BCAMP50895 628 aa8□□□□□ -1.13
DDX1-208ENST00000621973 DALRD3Q5D0E6 543 aaKnown RBP8□□□□□ -1.13
DDX1-208ENST00000621973 EMID1Q96A84 441 aaPredicted RBP8□□□□□ -1.13
DDX1-208ENST00000621973 KCNG1Q9UIX4 513 aa8□□□□□ -1.13
DDX1-208ENST00000621973 TRPM2O94759 1503 aa8□□□□□ -1.13
DDX1-208ENST00000621973 DEPDC5O75140 1603 aa8□□□□□ -1.13
DDX1-208ENST00000621973 ABCA9Q8IUA7 1624 aa8□□□□□ -1.13
DDX1-208ENST00000621973 RNF17Q9BXT8 1623 aaKnown RBP8□□□□□ -1.13
DDX1-208ENST00000621973 DISP3Q9P2K9 1392 aa8□□□□□ -1.13
DDX1-208ENST00000621973 KRT18P05783 430 aaKnown RBP8□□□□□ -1.13
DDX1-208ENST00000621973 TMF1P82094 1093 aa8□□□□□ -1.13
DDX1-208ENST00000621973 BRD3Q15059 726 aa8□□□□□ -1.13
DDX1-208ENST00000621973 TTF1Q15361 905 aaPredicted RBP8□□□□□ -1.13
DDX1-208ENST00000621973 VPS72Q15906 364 aa8□□□□□ -1.13
DDX1-208ENST00000621973 NLRP13Q86W25 1043 aa8□□□□□ -1.13
DDX1-208ENST00000621973 NAP1L4Q99733 375 aaKnown RBP8□□□□□ -1.13
DDX1-208ENST00000621973 LDHAL6BQ9BYZ2 381 aaPredicted RBP8□□□□□ -1.13
DDX1-208ENST00000621973 JADE2Q9NQC1 790 aa8□□□□□ -1.13
DDX1-208ENST00000621973 INTUQ9ULD6 942 aa8□□□□□ -1.13
DDX1-208ENST00000621973 PCDHB11Q9Y5F2 797 aa8□□□□□ -1.13
DDX1-208ENST00000621973 ESPNB1AK53 854 aa7.99□□□□□ -1.13
DDX1-208ENST00000621973 SCGB1D2O95969 90 aa7.99□□□□□ -1.13
DDX1-208ENST00000621973 NASPP49321 788 aaPredicted RBP7.99□□□□□ -1.13
DDX1-208ENST00000621973 POU5F1BQ06416 359 aa7.99□□□□□ -1.13
DDX1-208ENST00000621973 NFX1Q12986 1120 aaKnown RBP7.99□□□□□ -1.13
DDX1-208ENST00000621973 NBPF20Q3BBV1 942 aa7.99□□□□□ -1.13
DDX1-208ENST00000621973 ADGRD1Q6QNK2 874 aa7.99□□□□□ -1.13
DDX1-208ENST00000621973 C14orf80Q86SX3 495 aa7.99□□□□□ -1.13
DDX1-208ENST00000621973 BPHLQ86WA6 291 aaPredicted RBP7.99□□□□□ -1.13
DDX1-208ENST00000621973 SLC10A4Q96EP9 437 aa7.99□□□□□ -1.13
DDX1-208ENST00000621973 CASS4Q9NQ75 786 aa7.99□□□□□ -1.13
DDX1-208ENST00000621973 TMEM260Q9NX78 707 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms