RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 RNF208Q9H0X6 261 aa6.93□□□□□ -1.3
HDGFL3-202ENST00000562702 KCNK4Q9NYG8 393 aa6.93□□□□□ -1.3
HDGFL3-202ENST00000562702 ADGRE2Q9UHX3 823 aa6.93□□□□□ -1.3
HDGFL3-202ENST00000562702 WDR64B1ANS9 1081 aa6.92□□□□□ -1.3
HDGFL3-202ENST00000562702 ADAMTS4O75173 837 aa6.92□□□□□ -1.3
HDGFL3-202ENST00000562702 ATP11AP98196 1134 aa6.92□□□□□ -1.3
HDGFL3-202ENST00000562702 LCE1DQ5T752 114 aa6.92□□□□□ -1.3
HDGFL3-202ENST00000562702 WNT8BQ93098 351 aa6.92□□□□□ -1.3
HDGFL3-202ENST00000562702 ARXQ96QS3 562 aa6.92□□□□□ -1.3
HDGFL3-202ENST00000562702 PIM2Q9P1W9 311 aa6.92□□□□□ -1.3
HDGFL3-202ENST00000562702 A6NJR5 290 aa6.91□□□□□ -1.3
HDGFL3-202ENST00000562702 PIP4K2BP78356 416 aa6.91□□□□□ -1.3
HDGFL3-202ENST00000562702 C16orf46Q6P387 395 aa6.91□□□□□ -1.3
HDGFL3-202ENST00000562702 NCAPG2Q86XI2 1143 aa6.91□□□□□ -1.3
HDGFL3-202ENST00000562702 LEMD3Q9Y2U8 911 aa6.91□□□□□ -1.3
HDGFL3-202ENST00000562702 ARL4DP49703 201 aa6.9□□□□□ -1.3
HDGFL3-202ENST00000562702 TRIP4Q15650 581 aaPredicted RBP6.9□□□□□ -1.3
HDGFL3-202ENST00000562702 CPSF6Q16630 551 aaKnown RBP eCLIP6.9□□□□□ -1.3
HDGFL3-202ENST00000562702 ASIC4Q96FT7 647 aa6.9□□□□□ -1.3
HDGFL3-202ENST00000562702 PBX4Q9BYU1 374 aa6.9□□□□□ -1.3
HDGFL3-202ENST00000562702 RASSF4Q9H2L5 321 aa6.9□□□□□ -1.3
HDGFL3-202ENST00000562702 OSGEPQ9NPF4 335 aa6.9□□□□□ -1.3
HDGFL3-202ENST00000562702 ABI2Q9NYB9 513 aaPredicted RBP6.9□□□□□ -1.3
HDGFL3-202ENST00000562702 H3BRJ5 948 aa6.89□□□□□ -1.31
HDGFL3-202ENST00000562702 RFX1P22670 979 aa6.89□□□□□ -1.31
HDGFL3-202ENST00000562702 FKBP5Q13451 457 aaPredicted RBP6.89□□□□□ -1.31
HDGFL3-202ENST00000562702 ETFBKMTQ8IXQ9 262 aa6.89□□□□□ -1.31
HDGFL3-202ENST00000562702 UBASH3BQ8TF42 649 aa6.89□□□□□ -1.31
HDGFL3-202ENST00000562702 FOXD4L4Q8WXT5 416 aaPredicted RBP6.89□□□□□ -1.31
HDGFL3-202ENST00000562702 KLHDC7BQ96G42 594 aa6.89□□□□□ -1.31
HDGFL3-202ENST00000562702 FBXL18Q96ME1 805 aa6.89□□□□□ -1.31
HDGFL3-202ENST00000562702 RUSC1Q9BVN2 902 aa6.89□□□□□ -1.31
HDGFL3-202ENST00000562702 OSBPL1AQ9BXW6 950 aa6.89□□□□□ -1.31
HDGFL3-202ENST00000562702 DDX3YO15523 660 aaKnown RBP6.88□□□□□ -1.31
HDGFL3-202ENST00000562702 KIF4AO95239 1232 aa6.88□□□□□ -1.31
HDGFL3-202ENST00000562702 EPHA1P21709 976 aa6.88□□□□□ -1.31
HDGFL3-202ENST00000562702 RXRBP28702 533 aa6.88□□□□□ -1.31
HDGFL3-202ENST00000562702 PREPP48147 710 aa6.88□□□□□ -1.31
HDGFL3-202ENST00000562702 SWI5Q1ZZU3 235 aa6.88□□□□□ -1.31
HDGFL3-202ENST00000562702 COL13A1Q5TAT6 717 aaPredicted RBP6.88□□□□□ -1.31
HDGFL3-202ENST00000562702 ABI1Q8IZP0 508 aa6.88□□□□□ -1.31
HDGFL3-202ENST00000562702 MFSD14AQ96MC6 490 aa6.88□□□□□ -1.31
HDGFL3-202ENST00000562702 KRTAP4-7Q9BYR0 210 aa6.88□□□□□ -1.31
HDGFL3-202ENST00000562702 SH2B1Q9NRF2 756 aaPredicted RBP6.88□□□□□ -1.31
HDGFL3-202ENST00000562702 FNBP4Q8N3X1 1017 aaPredicted RBP6.87□□□□□ -1.31
HDGFL3-202ENST00000562702 METTL22Q9BUU2 404 aaPredicted RBP6.87□□□□□ -1.31
HDGFL3-202ENST00000562702 ADAM19Q9H013 955 aa6.87□□□□□ -1.31
HDGFL3-202ENST00000562702 ADAM11O75078 769 aa6.86□□□□□ -1.31
HDGFL3-202ENST00000562702 MAP4P27816 1152 aaKnown RBP6.86□□□□□ -1.31
HDGFL3-202ENST00000562702 ZAP70P43403 619 aa6.86□□□□□ -1.31
HDGFL3-202ENST00000562702 VSIG10LQ86VR7 867 aa6.86□□□□□ -1.31
HDGFL3-202ENST00000562702 TP53INP2Q8IXH6 220 aa6.86□□□□□ -1.31
HDGFL3-202ENST00000562702 COL26A1Q96A83 441 aa6.86□□□□□ -1.31
HDGFL3-202ENST00000562702 CLUAP1Q96AJ1 413 aa6.86□□□□□ -1.31
HDGFL3-202ENST00000562702 FOSL1P15407 271 aa6.85□□□□□ -1.31
HDGFL3-202ENST00000562702 NLRP12P59046 1061 aa6.85□□□□□ -1.31
HDGFL3-202ENST00000562702 NUTM2GQ5VZR2 741 aa6.85□□□□□ -1.31
HDGFL3-202ENST00000562702 OGFOD2Q6N063 350 aa6.85□□□□□ -1.31
HDGFL3-202ENST00000562702 FBXL6Q8N531 539 aa6.85□□□□□ -1.31
HDGFL3-202ENST00000562702 CEP120Q8N960 986 aa6.85□□□□□ -1.31
HDGFL3-202ENST00000562702 ABTB2Q8N961 1025 aa6.85□□□□□ -1.31
HDGFL3-202ENST00000562702 PRIMPOLQ96LW4 560 aa6.85□□□□□ -1.31
HDGFL3-202ENST00000562702 ACIN1Q9UKV3 1341 aaKnown RBP6.84□□□□□ -1.31
HDGFL3-202ENST00000562702 MEGF11A6BM72 1044 aa6.84□□□□□ -1.31
HDGFL3-202ENST00000562702 TM4SF5O14894 197 aa6.84□□□□□ -1.31
HDGFL3-202ENST00000562702 PRMT3O60678 531 aa6.84□□□□□ -1.31
HDGFL3-202ENST00000562702 RPLP1P05386 114 aaKnown RBP6.84□□□□□ -1.31
HDGFL3-202ENST00000562702 JUNBP17275 347 aaPredicted RBP6.84□□□□□ -1.31
HDGFL3-202ENST00000562702 HOXA10P31260 410 aaPredicted RBP6.84□□□□□ -1.31
HDGFL3-202ENST00000562702 JAG1P78504 1218 aa6.84□□□□□ -1.31
HDGFL3-202ENST00000562702 PDE12Q6L8Q7 609 aaKnown RBP6.84□□□□□ -1.31
HDGFL3-202ENST00000562702 PAOXQ6QHF9 649 aa6.84□□□□□ -1.31
HDGFL3-202ENST00000562702 GPR152Q8TDT2 470 aa6.84□□□□□ -1.31
HDGFL3-202ENST00000562702 SLC7A3Q8WY07 619 aa6.84□□□□□ -1.31
HDGFL3-202ENST00000562702 POP1Q99575 1024 aaKnown RBP6.84□□□□□ -1.31
HDGFL3-202ENST00000562702 CYP4F12Q9HCS2 524 aa6.84□□□□□ -1.31
HDGFL3-202ENST00000562702 NOVA2Q9UNW9 492 aaKnown RBP6.84□□□□□ -1.31
HDGFL3-202ENST00000562702 C19orf57Q0VDD7 668 aa6.83□□□□□ -1.32
HDGFL3-202ENST00000562702 POU5F2Q8N7G0 328 aa6.83□□□□□ -1.32
HDGFL3-202ENST00000562702 C12orf50Q8NA57 414 aaPredicted RBP6.83□□□□□ -1.32
HDGFL3-202ENST00000562702 AGBL5Q8NDL9 886 aa6.83□□□□□ -1.32
HDGFL3-202ENST00000562702 YIPF2Q9BWQ6 316 aa6.83□□□□□ -1.32
HDGFL3-202ENST00000562702 SAP130Q9H0E3 1048 aa6.83□□□□□ -1.32
HDGFL3-202ENST00000562702 CCDC39Q9UFE4 941 aa6.83□□□□□ -1.32
HDGFL3-202ENST00000562702 FAM95CA0A1B0GW59 222 aa6.82□□□□□ -1.32
HDGFL3-202ENST00000562702 PRNPP04156 253 aa6.82□□□□□ -1.32
HDGFL3-202ENST00000562702 USP11P51784 963 aa6.82□□□□□ -1.32
HDGFL3-202ENST00000562702 MSMPQ1L6U9 139 aa6.82□□□□□ -1.32
HDGFL3-202ENST00000562702 TTC16Q8NEE8 873 aa6.82□□□□□ -1.32
HDGFL3-202ENST00000562702 ZMYND15Q9H091 742 aa6.82□□□□□ -1.32
HDGFL3-202ENST00000562702 STIM2Q9P246 746 aa6.82□□□□□ -1.32
HDGFL3-202ENST00000562702 CYP26A1O43174 497 aa6.81□□□□□ -1.32
HDGFL3-202ENST00000562702 EIF4EBP3O60516 100 aaPredicted RBP6.81□□□□□ -1.32
HDGFL3-202ENST00000562702 F13BP05160 661 aa6.81□□□□□ -1.32
HDGFL3-202ENST00000562702 PCSK2P16519 638 aa6.81□□□□□ -1.32
HDGFL3-202ENST00000562702 NFKBIBQ15653 356 aa6.81□□□□□ -1.32
HDGFL3-202ENST00000562702 SGO2Q562F6 1265 aa6.81□□□□□ -1.32
HDGFL3-202ENST00000562702 ZNF438Q7Z4V0 828 aa6.81□□□□□ -1.32
HDGFL3-202ENST00000562702 ELP3Q9H9T3 547 aa6.81□□□□□ -1.32
HDGFL3-202ENST00000562702 BSDC1Q9NW68 430 aaPredicted RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 147.1 ms