RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 UBAP1LF5GYI3 381 aa9.61□□□□□ -0.87
PABPC1-216ENST00000520868 RGS9O75916 674 aaPredicted RBP9.61□□□□□ -0.87
PABPC1-216ENST00000520868 PSAPP07602 524 aa9.61□□□□□ -0.87
PABPC1-216ENST00000520868 FURINP09958 794 aa9.61□□□□□ -0.87
PABPC1-216ENST00000520868 AFF1P51825 1210 aaKnown RBP9.61□□□□□ -0.87
PABPC1-216ENST00000520868 TRIP4Q15650 581 aaPredicted RBP9.61□□□□□ -0.87
PABPC1-216ENST00000520868 GRIK4Q16099 956 aa9.61□□□□□ -0.87
PABPC1-216ENST00000520868 B4GALNT3Q6L9W6 998 aa9.61□□□□□ -0.87
PABPC1-216ENST00000520868 HFE2Q6ZVN8 426 aa9.61□□□□□ -0.87
PABPC1-216ENST00000520868 NLRP13Q86W25 1043 aa9.61□□□□□ -0.87
PABPC1-216ENST00000520868 TIMELESSQ9UNS1 1208 aa9.61□□□□□ -0.87
PABPC1-216ENST00000520868 SAMD9Q5K651 1589 aa9.61□□□□□ -0.87
PABPC1-216ENST00000520868 SOX18P35713 384 aa9.6□□□□□ -0.87
PABPC1-216ENST00000520868 TRAPPC3LQ5T215 181 aa9.6□□□□□ -0.87
PABPC1-216ENST00000520868 ARID3AQ99856 593 aa9.6□□□□□ -0.87
PABPC1-216ENST00000520868 LPIN3Q9BQK8 851 aa9.6□□□□□ -0.87
PABPC1-216ENST00000520868 AKNAQ7Z591 1439 aa9.59□□□□□ -0.87
PABPC1-216ENST00000520868 ZBTB39O15060 712 aa9.59□□□□□ -0.87
PABPC1-216ENST00000520868 ADAM23O75077 832 aa9.59□□□□□ -0.87
PABPC1-216ENST00000520868 RPLP1P05386 114 aaKnown RBP9.59□□□□□ -0.87
PABPC1-216ENST00000520868 MLECQ14165 292 aa9.59□□□□□ -0.87
PABPC1-216ENST00000520868 PERM1Q5SV97 790 aa9.59□□□□□ -0.87
PABPC1-216ENST00000520868 GPR152Q8TDT2 470 aa9.59□□□□□ -0.87
PABPC1-216ENST00000520868 DENND4BO75064 1496 aaPredicted RBP9.59□□□□□ -0.87
PABPC1-216ENST00000520868 ADAMTSL3P82987 1691 aa9.58□□□□□ -0.88
PABPC1-216ENST00000520868 CARNS1A5YM72 827 aa9.58□□□□□ -0.88
PABPC1-216ENST00000520868 HOXD8P13378 290 aaPredicted RBP9.58□□□□□ -0.88
PABPC1-216ENST00000520868 HSPA2P54652 639 aa9.58□□□□□ -0.88
PABPC1-216ENST00000520868 TRIM28Q13263 835 aaKnown RBP9.58□□□□□ -0.88
PABPC1-216ENST00000520868 ELMSAN1Q6PJG2 1045 aa9.58□□□□□ -0.88
PABPC1-216ENST00000520868 GTF3C2Q8WUA4 911 aaPredicted RBP9.58□□□□□ -0.88
PABPC1-216ENST00000520868 A0A0A0MRY4 1105 aa9.57□□□□□ -0.88
PABPC1-216ENST00000520868 MMP20O60882 483 aa9.57□□□□□ -0.88
PABPC1-216ENST00000520868 PCSK2P16519 638 aa9.57□□□□□ -0.88
PABPC1-216ENST00000520868 PDE4CQ08493 712 aa9.57□□□□□ -0.88
PABPC1-216ENST00000520868 DOC2BQ14184 412 aa9.57□□□□□ -0.88
PABPC1-216ENST00000520868 GRIK5Q16478 980 aa9.57□□□□□ -0.88
PABPC1-216ENST00000520868 NOM1Q5C9Z4 860 aaKnown RBP9.57□□□□□ -0.88
PABPC1-216ENST00000520868 DMRTC2Q8IXT2 367 aaPredicted RBP9.57□□□□□ -0.88
PABPC1-216ENST00000520868 TTC9Q92623 222 aa9.57□□□□□ -0.88
PABPC1-216ENST00000520868 RBSNQ9H1K0 784 aa9.57□□□□□ -0.88
PABPC1-216ENST00000520868 FRMPD1Q5SYB0 1578 aa9.56□□□□□ -0.88
PABPC1-216ENST00000520868 FANCAO15360 1455 aa9.56□□□□□ -0.88
PABPC1-216ENST00000520868 J3QW42 95 aa9.56□□□□□ -0.88
PABPC1-216ENST00000520868 EIF2AK2P19525 551 aaKnown RBP9.56□□□□□ -0.88
PABPC1-216ENST00000520868 ALKBH2Q6NS38 261 aa9.56□□□□□ -0.88
PABPC1-216ENST00000520868 NSUN5Q96P11 429 aaKnown RBP9.56□□□□□ -0.88
PABPC1-216ENST00000520868 BCORL1Q5H9F3 1711 aa9.56□□□□□ -0.88
PABPC1-216ENST00000520868 MADDQ8WXG6 1647 aa9.56□□□□□ -0.88
PABPC1-216ENST00000520868 EEA1Q15075 1411 aa9.56□□□□□ -0.88
PABPC1-216ENST00000520868 LOC102724428A0A0B4J2F2 783 aa9.55□□□□□ -0.88
PABPC1-216ENST00000520868 APBA3O96018 575 aa9.55□□□□□ -0.88
PABPC1-216ENST00000520868 SIK1P57059 783 aa9.55□□□□□ -0.88
PABPC1-216ENST00000520868 RAC1P63000 192 aa9.55□□□□□ -0.88
PABPC1-216ENST00000520868 TTC39BQ5VTQ0 682 aaPredicted RBP9.55□□□□□ -0.88
PABPC1-216ENST00000520868 PDE12Q6L8Q7 609 aaKnown RBP9.55□□□□□ -0.88
PABPC1-216ENST00000520868 ILDR2Q71H61 639 aa9.55□□□□□ -0.88
PABPC1-216ENST00000520868 NACC1Q96RE7 527 aa9.55□□□□□ -0.88
PABPC1-216ENST00000520868 K7ELQ4 463 aaPredicted RBP9.54□□□□□ -0.88
PABPC1-216ENST00000520868 GHRHP01286 108 aa9.54□□□□□ -0.88
PABPC1-216ENST00000520868 GATA4P43694 442 aa9.54□□□□□ -0.88
PABPC1-216ENST00000520868 PHLDB3Q6NSJ2 640 aa9.54□□□□□ -0.88
PABPC1-216ENST00000520868 SHISA2Q6UWI4 295 aa9.54□□□□□ -0.88
PABPC1-216ENST00000520868 TTC16Q8NEE8 873 aa9.54□□□□□ -0.88
PABPC1-216ENST00000520868 OR13H1Q8NG92 308 aa9.54□□□□□ -0.88
PABPC1-216ENST00000520868 NUDT16Q96DE0 195 aaKnown RBP9.54□□□□□ -0.88
PABPC1-216ENST00000520868 SMG9Q9H0W8 520 aaKnown RBP9.54□□□□□ -0.88
PABPC1-216ENST00000520868 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.54□□□□□ -0.88
PABPC1-216ENST00000520868 YEATS2Q9ULM3 1422 aa9.54□□□□□ -0.88
PABPC1-216ENST00000520868 LMTK3Q96Q04 1460 aa9.53□□□□□ -0.88
PABPC1-216ENST00000520868 FAM13AO94988 1023 aa9.53□□□□□ -0.88
PABPC1-216ENST00000520868 SELPP16109 830 aa9.53□□□□□ -0.88
PABPC1-216ENST00000520868 MPSTP25325 297 aa9.53□□□□□ -0.88
PABPC1-216ENST00000520868 EIF1AXP47813 144 aaKnown RBP9.53□□□□□ -0.88
PABPC1-216ENST00000520868 SF3B2Q13435 895 aaKnown RBP9.53□□□□□ -0.88
PABPC1-216ENST00000520868 ATCAYQ86WG3 371 aa9.53□□□□□ -0.88
PABPC1-216ENST00000520868 ABI2Q9NYB9 513 aaPredicted RBP9.53□□□□□ -0.88
PABPC1-216ENST00000520868 POGZQ7Z3K3 1410 aa9.53□□□□□ -0.88
PABPC1-216ENST00000520868 SCAPERQ9BY12 1400 aa9.53□□□□□ -0.88
PABPC1-216ENST00000520868 PCF11O94913 1555 aaKnown RBP9.53□□□□□ -0.88
PABPC1-216ENST00000520868 EFCAB2Q5VUJ9 269 aa9.52□□□□□ -0.89
PABPC1-216ENST00000520868 MSL1Q68DK7 614 aa9.52□□□□□ -0.89
PABPC1-216ENST00000520868 PLD4Q96BZ4 506 aa9.52□□□□□ -0.89
PABPC1-216ENST00000520868 RIMS1Q86UR5 1692 aaKnown RBP9.51□□□□□ -0.89
PABPC1-216ENST00000520868 CDK13Q14004 1512 aaKnown RBP9.51□□□□□ -0.89
PABPC1-216ENST00000520868 ARHGEF40Q8TER5 1519 aa9.51□□□□□ -0.89
PABPC1-216ENST00000520868 PLCH2O75038 1416 aa9.51□□□□□ -0.89
PABPC1-216ENST00000520868 ELNP15502 786 aa9.51□□□□□ -0.89
PABPC1-216ENST00000520868 NPR3P17342 541 aa9.51□□□□□ -0.89
PABPC1-216ENST00000520868 ITGB7P26010 798 aa9.51□□□□□ -0.89
PABPC1-216ENST00000520868 MZF1P28698 734 aaPredicted RBP9.51□□□□□ -0.89
PABPC1-216ENST00000520868 FKBP4Q02790 459 aaKnown RBP eCLIP9.51□□□□□ -0.89
PABPC1-216ENST00000520868 DNM1Q05193 864 aaKnown RBP9.51□□□□□ -0.89
PABPC1-216ENST00000520868 HYAL2Q12891 473 aa9.51□□□□□ -0.89
PABPC1-216ENST00000520868 COL13A1Q5TAT6 717 aaPredicted RBP9.51□□□□□ -0.89
PABPC1-216ENST00000520868 WFDC8Q8IUA0 241 aa9.51□□□□□ -0.89
PABPC1-216ENST00000520868 DTWD1Q8N5C7 304 aa9.51□□□□□ -0.89
PABPC1-216ENST00000520868 EDEM1Q92611 657 aa9.51□□□□□ -0.89
PABPC1-216ENST00000520868 SPACA7Q96KW9 195 aa9.51□□□□□ -0.89
PABPC1-216ENST00000520868 ZFYVE16Q7Z3T8 1539 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms