RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 RAB3GAP1Q15042 981 aa18.87■□□□□ 0.61
PCDHA1-203ENST00000504120 ZMYM3Q14202 1370 aa18.86■□□□□ 0.61
PCDHA1-203ENST00000504120 NPC1L1Q9UHC9 1359 aa18.86■□□□□ 0.61
PCDHA1-203ENST00000504120 TUBB4AP04350 444 aa18.86■□□□□ 0.61
PCDHA1-203ENST00000504120 CALCOCO1Q9P1Z2 691 aa18.86■□□□□ 0.61
PCDHA1-203ENST00000504120 PSMA7O14818 248 aa18.86■□□□□ 0.61
PCDHA1-203ENST00000504120 PRPF4BQ13523 1007 aaKnown RBP18.86■□□□□ 0.61
PCDHA1-203ENST00000504120 PLEKHM2Q8IWE5 1019 aa18.86■□□□□ 0.61
PCDHA1-203ENST00000504120 RTL9Q8NET4 1388 aa18.86■□□□□ 0.61
PCDHA1-203ENST00000504120 ABCC1P33527 1531 aa18.86■□□□□ 0.61
PCDHA1-203ENST00000504120 MYO1BO43795 1136 aa18.86■□□□□ 0.61
PCDHA1-203ENST00000504120 AK2P54819 239 aa18.86■□□□□ 0.61
PCDHA1-203ENST00000504120 CHMP4BP1P59074 171 aa18.86■□□□□ 0.61
PCDHA1-203ENST00000504120 CREB3L3Q68CJ9 461 aa18.86■□□□□ 0.61
PCDHA1-203ENST00000504120 FERMT2Q96AC1 680 aa18.86■□□□□ 0.61
PCDHA1-203ENST00000504120 TRIM75PA6NK02 468 aa18.86■□□□□ 0.61
PCDHA1-203ENST00000504120 CCDC186Q7Z3E2 898 aa18.86■□□□□ 0.61
PCDHA1-203ENST00000504120 HEATR3Q7Z4Q2 680 aa18.86■□□□□ 0.61
PCDHA1-203ENST00000504120 YTHDC2Q9H6S0 1430 aaKnown RBP18.85■□□□□ 0.61
PCDHA1-203ENST00000504120 TTLL12Q14166 644 aaPredicted RBP18.85■□□□□ 0.61
PCDHA1-203ENST00000504120 CCDC174Q6PII3 467 aa18.85■□□□□ 0.61
PCDHA1-203ENST00000504120 ZNF622Q969S3 477 aaKnown RBP eCLIP18.85■□□□□ 0.61
PCDHA1-203ENST00000504120 NOLC1Q14978 699 aaKnown RBP eCLIP18.85■□□□□ 0.61
PCDHA1-203ENST00000504120 TNNQ9UQP3 1299 aa18.85■□□□□ 0.61
PCDHA1-203ENST00000504120 NEO1Q92859 1461 aa18.85■□□□□ 0.61
PCDHA1-203ENST00000504120 RTL1A6NKG5 1358 aa18.85■□□□□ 0.61
PCDHA1-203ENST00000504120 MAGEB6P1A0A0J9YX57 407 aa18.85■□□□□ 0.61
PCDHA1-203ENST00000504120 CALML3P27482 149 aa18.85■□□□□ 0.61
PCDHA1-203ENST00000504120 AOPEPQ8N6M6 819 aa18.85■□□□□ 0.61
PCDHA1-203ENST00000504120 SPAG5Q96R06 1193 aa18.85■□□□□ 0.61
PCDHA1-203ENST00000504120 NIP7Q9Y221 180 aaKnown RBP eCLIP18.85■□□□□ 0.61
PCDHA1-203ENST00000504120 GOLGA6L10A0A0M3HER8 536 aa18.85■□□□□ 0.61
PCDHA1-203ENST00000504120 DNAJC25Q9H1X3 360 aa18.85■□□□□ 0.61
PCDHA1-203ENST00000504120 MARCKSP29966 332 aaPredicted RBP18.84■□□□□ 0.61
PCDHA1-203ENST00000504120 XRCC6P12956 609 aaKnown RBP eCLIP18.84■□□□□ 0.61
PCDHA1-203ENST00000504120 USP37Q86T82 979 aa18.84■□□□□ 0.61
PCDHA1-203ENST00000504120 TBC1D5Q92609 795 aa18.84■□□□□ 0.61
PCDHA1-203ENST00000504120 CARD14Q9BXL6 1004 aa18.84■□□□□ 0.61
PCDHA1-203ENST00000504120 IL2RBP14784 551 aa18.84■□□□□ 0.61
PCDHA1-203ENST00000504120 CHMLP26374 656 aa18.84■□□□□ 0.61
PCDHA1-203ENST00000504120 NFATC2IPQ8NCF5 419 aa18.84■□□□□ 0.61
PCDHA1-203ENST00000504120 DCAF5Q96JK2 942 aa18.84■□□□□ 0.61
PCDHA1-203ENST00000504120 IQSEC3Q9UPP2 1182 aaPredicted RBP18.84■□□□□ 0.61
PCDHA1-203ENST00000504120 DHX32Q7L7V1 743 aaKnown RBP18.84■□□□□ 0.61
PCDHA1-203ENST00000504120 NYXQ9GZU5 481 aa18.84■□□□□ 0.61
PCDHA1-203ENST00000504120 RUFY3Q7L099 469 aa18.83■□□□□ 0.61
PCDHA1-203ENST00000504120 ZNF804AQ7Z570 1209 aa18.83■□□□□ 0.61
PCDHA1-203ENST00000504120 LRRC59Q96AG4 307 aaKnown RBP18.83■□□□□ 0.61
PCDHA1-203ENST00000504120 GTPBP4Q9BZE4 634 aaKnown RBP18.83■□□□□ 0.61
PCDHA1-203ENST00000504120 CCDC175P0C221 793 aa18.83■□□□□ 0.61
PCDHA1-203ENST00000504120 NAPAP54920 295 aa18.83■□□□□ 0.61
PCDHA1-203ENST00000504120 EYA1Q99502 592 aa18.83■□□□□ 0.61
PCDHA1-203ENST00000504120 A0A1W2PP64 1363 aa18.83■□□□□ 0.61
PCDHA1-203ENST00000504120 ABCA8O94911 1581 aa18.83■□□□□ 0.61
PCDHA1-203ENST00000504120 PER1O15534 1290 aaPredicted RBP18.83■□□□□ 0.6
PCDHA1-203ENST00000504120 CWF19L2Q2TBE0 894 aaKnown RBP18.83■□□□□ 0.6
PCDHA1-203ENST00000504120 PHACTR3Q96KR7 559 aa18.83■□□□□ 0.6
PCDHA1-203ENST00000504120 MPHOSPH6Q99547 160 aaKnown RBP18.83■□□□□ 0.6
PCDHA1-203ENST00000504120 C6orf50Q9HD87 102 aa18.83■□□□□ 0.6
PCDHA1-203ENST00000504120 BRAPQ7Z569 592 aa18.83■□□□□ 0.6
PCDHA1-203ENST00000504120 PLVAPQ9BX97 442 aa18.83■□□□□ 0.6
PCDHA1-203ENST00000504120 DZIP3Q86Y13 1208 aaKnown RBP18.82■□□□□ 0.6
PCDHA1-203ENST00000504120 CLCN1P35523 988 aa18.82■□□□□ 0.6
PCDHA1-203ENST00000504120 TYRO3Q06418 890 aa18.82■□□□□ 0.6
PCDHA1-203ENST00000504120 MAATS1Q7Z4T9 603 aa18.82■□□□□ 0.6
PCDHA1-203ENST00000504120 TRPM2O94759 1503 aa18.82■□□□□ 0.6
PCDHA1-203ENST00000504120 TFCP2Q12800 502 aa18.82■□□□□ 0.6
PCDHA1-203ENST00000504120 CTAGE15A4D2H0 777 aa18.81■□□□□ 0.6
PCDHA1-203ENST00000504120 CTAGE8P0CG41 777 aa18.81■□□□□ 0.6
PCDHA1-203ENST00000504120 ASIC1P78348 528 aa18.81■□□□□ 0.6
PCDHA1-203ENST00000504120 CTAGE6Q86UF2 777 aa18.81■□□□□ 0.6
PCDHA1-203ENST00000504120 CTAGE4Q8IX94 777 aa18.81■□□□□ 0.6
PCDHA1-203ENST00000504120 PRDM10Q9NQV6 1147 aa18.81■□□□□ 0.6
PCDHA1-203ENST00000504120 TRMT1LQ7Z2T5 733 aaKnown RBP18.81■□□□□ 0.6
PCDHA1-203ENST00000504120 USP26Q9BXU7 913 aa18.81■□□□□ 0.6
PCDHA1-203ENST00000504120 ZSWIM4Q9H7M6 989 aa18.81■□□□□ 0.6
PCDHA1-203ENST00000504120 KIAA0753Q2KHM9 967 aa18.81■□□□□ 0.6
PCDHA1-203ENST00000504120 RNF187Q5TA31 235 aaPredicted RBP18.81■□□□□ 0.6
PCDHA1-203ENST00000504120 DHX37Q8IY37 1157 aaKnown RBP18.81■□□□□ 0.6
PCDHA1-203ENST00000504120 ZKSCAN5Q9Y2L8 839 aa18.81■□□□□ 0.6
PCDHA1-203ENST00000504120 TBX22Q9Y458 520 aa18.81■□□□□ 0.6
PCDHA1-203ENST00000504120 ZNF830Q96NB3 372 aaPredicted RBP18.81■□□□□ 0.6
PCDHA1-203ENST00000504120 PTPDC1A2A3K4 754 aa18.8■□□□□ 0.6
PCDHA1-203ENST00000504120 SYT1P21579 422 aa18.8■□□□□ 0.6
PCDHA1-203ENST00000504120 ATL3Q6DD88 541 aa18.8■□□□□ 0.6
PCDHA1-203ENST00000504120 SIRT1Q96EB6 747 aa18.8■□□□□ 0.6
PCDHA1-203ENST00000504120 BABAM1Q9NWV8 329 aa18.8■□□□□ 0.6
PCDHA1-203ENST00000504120 DNAI1Q9UI46 699 aa18.8■□□□□ 0.6
PCDHA1-203ENST00000504120 PLCG2P16885 1265 aa18.8■□□□□ 0.6
PCDHA1-203ENST00000504120 BBXQ8WY36 941 aaPredicted RBP18.8■□□□□ 0.6
PCDHA1-203ENST00000504120 DHX58Q96C10 678 aa18.8■□□□□ 0.6
PCDHA1-203ENST00000504120 BICD1Q96G01 975 aa18.8■□□□□ 0.6
PCDHA1-203ENST00000504120 SRRTQ9BXP5 876 aaKnown RBP18.8■□□□□ 0.6
PCDHA1-203ENST00000504120 FSD2A1L4K1 749 aa18.8■□□□□ 0.6
PCDHA1-203ENST00000504120 IRS4O14654 1257 aaPredicted RBP18.8■□□□□ 0.6
PCDHA1-203ENST00000504120 KRT13P13646 458 aa18.8■□□□□ 0.6
PCDHA1-203ENST00000504120 KRT2P35908 639 aa18.8■□□□□ 0.6
PCDHA1-203ENST00000504120 APOBRQ0VD83 1088 aa18.8■□□□□ 0.6
PCDHA1-203ENST00000504120 DDB1Q16531 1140 aa18.8■□□□□ 0.6
PCDHA1-203ENST00000504120 KRT24Q2M2I5 525 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms