RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 TSPYL6Q8N831 410 aa8.42□□□□□ -1.06
VAMP3-202ENST00000470357 CHMP4BQ9H444 224 aaKnown RBP8.42□□□□□ -1.06
VAMP3-202ENST00000470357 PTPRCP08575 1304 aa8.42□□□□□ -1.06
VAMP3-202ENST00000470357 HEG1Q9ULI3 1381 aa8.42□□□□□ -1.06
VAMP3-202ENST00000470357 SNRPA1P09661 255 aaKnown RBP8.41□□□□□ -1.06
VAMP3-202ENST00000470357 HDGFL1Q5TGJ6 251 aa8.41□□□□□ -1.06
VAMP3-202ENST00000470357 ATF7IPQ6VMQ6 1270 aa8.41□□□□□ -1.06
VAMP3-202ENST00000470357 FTSJ3Q8IY81 847 aaKnown RBP8.41□□□□□ -1.06
VAMP3-202ENST00000470357 FRAT1Q92837 279 aaPredicted RBP8.41□□□□□ -1.06
VAMP3-202ENST00000470357 SYTL4Q96C24 671 aaPredicted RBP8.41□□□□□ -1.06
VAMP3-202ENST00000470357 TEX13AQ9BXU3 409 aaPredicted RBP8.41□□□□□ -1.06
VAMP3-202ENST00000470357 API5Q9BZZ5 524 aaKnown RBP8.41□□□□□ -1.06
VAMP3-202ENST00000470357 N4BP2Q86UW6 1770 aaPredicted RBP8.4□□□□□ -1.06
VAMP3-202ENST00000470357 C5P01031 1676 aa8.4□□□□□ -1.06
VAMP3-202ENST00000470357 ZNF831Q5JPB2 1677 aa8.4□□□□□ -1.06
VAMP3-202ENST00000470357 ERBB4Q15303 1308 aa8.4□□□□□ -1.06
VAMP3-202ENST00000470357 SPRYD7Q5W111 196 aa8.4□□□□□ -1.06
VAMP3-202ENST00000470357 DZIP1LQ8IYY4 767 aaKnown RBP8.4□□□□□ -1.06
VAMP3-202ENST00000470357 TSC1Q92574 1164 aa8.4□□□□□ -1.06
VAMP3-202ENST00000470357 BCL2L13Q9BXK5 485 aa8.4□□□□□ -1.06
VAMP3-202ENST00000470357 DBF4Q9UBU7 674 aaPredicted RBP8.4□□□□□ -1.06
VAMP3-202ENST00000470357 ZBTB24O43167 697 aaPredicted RBP8.39□□□□□ -1.07
VAMP3-202ENST00000470357 HMGB2P26583 209 aaKnown RBP8.39□□□□□ -1.07
VAMP3-202ENST00000470357 KRT24Q2M2I5 525 aa8.39□□□□□ -1.07
VAMP3-202ENST00000470357 SMARCC1Q92922 1105 aaPredicted RBP8.39□□□□□ -1.07
VAMP3-202ENST00000470357 NUDT12Q9BQG2 462 aa8.39□□□□□ -1.07
VAMP3-202ENST00000470357 PPP4R2Q9NY27 417 aa8.39□□□□□ -1.07
VAMP3-202ENST00000470357 NOB1Q9ULX3 412 aaKnown RBP8.39□□□□□ -1.07
VAMP3-202ENST00000470357 CICQ96RK0 1608 aaPredicted RBP8.39□□□□□ -1.07
VAMP3-202ENST00000470357 KCPQ6ZWJ8 1503 aa8.39□□□□□ -1.07
VAMP3-202ENST00000470357 PLIN1O60240 522 aa8.38□□□□□ -1.07
VAMP3-202ENST00000470357 RPIAP49247 311 aa8.38□□□□□ -1.07
VAMP3-202ENST00000470357 SLC39A6Q13433 755 aa8.38□□□□□ -1.07
VAMP3-202ENST00000470357 COL13A1Q5TAT6 717 aaPredicted RBP8.38□□□□□ -1.07
VAMP3-202ENST00000470357 DESI1Q6ICB0 168 aa8.38□□□□□ -1.07
VAMP3-202ENST00000470357 PTCRAQ6ISU1 281 aaPredicted RBP8.38□□□□□ -1.07
VAMP3-202ENST00000470357 SMIM5Q71RC9 77 aa8.38□□□□□ -1.07
VAMP3-202ENST00000470357 PIGBQ92521 554 aa8.38□□□□□ -1.07
VAMP3-202ENST00000470357 ZNF496Q96IT1 587 aaPredicted RBP8.38□□□□□ -1.07
VAMP3-202ENST00000470357 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.38□□□□□ -1.07
VAMP3-202ENST00000470357 HYPKQ9NX55 129 aa8.38□□□□□ -1.07
VAMP3-202ENST00000470357 DDX19BQ9UMR2 479 aa8.38□□□□□ -1.07
VAMP3-202ENST00000470357 KCNQ3O43525 872 aa8.37□□□□□ -1.07
VAMP3-202ENST00000470357 TOMM70O94826 608 aa8.37□□□□□ -1.07
VAMP3-202ENST00000470357 CD2BP2O95400 341 aaKnown RBP8.37□□□□□ -1.07
VAMP3-202ENST00000470357 STARD3NLO95772 234 aa8.37□□□□□ -1.07
VAMP3-202ENST00000470357 DDX58O95786 925 aaKnown RBP8.37□□□□□ -1.07
VAMP3-202ENST00000470357 TRIM27P14373 513 aa8.37□□□□□ -1.07
VAMP3-202ENST00000470357 EIF2S2P20042 333 aaKnown RBP8.37□□□□□ -1.07
VAMP3-202ENST00000470357 IRX6P78412 446 aaPredicted RBP8.37□□□□□ -1.07
VAMP3-202ENST00000470357 LYPD8Q6UX82 237 aa8.37□□□□□ -1.07
VAMP3-202ENST00000470357 ZNF598Q86UK7 904 aaKnown RBP8.37□□□□□ -1.07
VAMP3-202ENST00000470357 FLAD1Q8NFF5 587 aa8.37□□□□□ -1.07
VAMP3-202ENST00000470357 PCMTD1Q96MG8 357 aaPredicted RBP8.37□□□□□ -1.07
VAMP3-202ENST00000470357 DDX21Q9NR30 783 aaKnown RBP eCLIP8.37□□□□□ -1.07
VAMP3-202ENST00000470357 WWC3Q9ULE0 1092 aa8.37□□□□□ -1.07
VAMP3-202ENST00000470357 PXDNLA1KZ92 1463 aa8.37□□□□□ -1.07
VAMP3-202ENST00000470357 ABCC4O15439 1325 aa8.36□□□□□ -1.07
VAMP3-202ENST00000470357 CCNYL3P0C7X3 344 aa8.36□□□□□ -1.07
VAMP3-202ENST00000470357 FLIIQ13045 1269 aa8.36□□□□□ -1.07
VAMP3-202ENST00000470357 MVPQ14764 893 aaKnown RBP8.36□□□□□ -1.07
VAMP3-202ENST00000470357 PTPRNQ16849 979 aa8.36□□□□□ -1.07
VAMP3-202ENST00000470357 ZNF697Q5TEC3 545 aa8.36□□□□□ -1.07
VAMP3-202ENST00000470357 JMYQ8N9B5 988 aa8.36□□□□□ -1.07
VAMP3-202ENST00000470357 CRBNQ96SW2 442 aa8.36□□□□□ -1.07
VAMP3-202ENST00000470357 GOPCQ9HD26 462 aa8.36□□□□□ -1.07
VAMP3-202ENST00000470357 ATG3Q9NT62 314 aa8.36□□□□□ -1.07
VAMP3-202ENST00000470357 PALLDQ8WX93 1383 aa8.35□□□□□ -1.07
VAMP3-202ENST00000470357 PTCD1O75127 700 aaKnown RBP8.35□□□□□ -1.07
VAMP3-202ENST00000470357 CCT4P50991 539 aaKnown RBP8.35□□□□□ -1.07
VAMP3-202ENST00000470357 HTRA3P83110 453 aa8.35□□□□□ -1.07
VAMP3-202ENST00000470357 FKBP5Q13451 457 aaPredicted RBP8.35□□□□□ -1.07
VAMP3-202ENST00000470357 INTS3Q68E01 1043 aaKnown RBP8.35□□□□□ -1.07
VAMP3-202ENST00000470357 ITPRIPQ8IWB1 547 aa8.35□□□□□ -1.07
VAMP3-202ENST00000470357 EXOC6Q8TAG9 804 aa8.35□□□□□ -1.07
VAMP3-202ENST00000470357 PANK1Q8TE04 598 aa8.35□□□□□ -1.07
VAMP3-202ENST00000470357 IRX2Q9BZI1 471 aaPredicted RBP8.35□□□□□ -1.07
VAMP3-202ENST00000470357 EVA1BQ9NVM1 165 aa8.35□□□□□ -1.07
VAMP3-202ENST00000470357 CHPF2Q9P2E5 772 aa8.35□□□□□ -1.07
VAMP3-202ENST00000470357 ASAP1Q9ULH1 1129 aa8.35□□□□□ -1.07
VAMP3-202ENST00000470357 TAF1LQ8IZX4 1826 aa8.35□□□□□ -1.07
VAMP3-202ENST00000470357 TJP1Q07157 1748 aa8.34□□□□□ -1.07
VAMP3-202ENST00000470357 TCERG1O14776 1098 aaKnown RBP8.34□□□□□ -1.07
VAMP3-202ENST00000470357 CTDSPL2Q05D32 466 aa8.34□□□□□ -1.07
VAMP3-202ENST00000470357 KCNH2Q12809 1159 aa8.34□□□□□ -1.07
VAMP3-202ENST00000470357 C20orf194Q5TEA3 1177 aa8.34□□□□□ -1.07
VAMP3-202ENST00000470357 PPP2R2DQ66LE6 453 aa8.34□□□□□ -1.07
VAMP3-202ENST00000470357 CLUAP1Q96AJ1 413 aa8.34□□□□□ -1.07
VAMP3-202ENST00000470357 KLRG1Q96E93 195 aa8.34□□□□□ -1.07
VAMP3-202ENST00000470357 CCDC136Q96JN2 1154 aa8.34□□□□□ -1.07
VAMP3-202ENST00000470357 NMRK2Q9NPI5 230 aa8.34□□□□□ -1.07
VAMP3-202ENST00000470357 HDAC5Q9UQL6 1122 aa8.34□□□□□ -1.07
VAMP3-202ENST00000470357 COG6Q9Y2V7 657 aa8.34□□□□□ -1.07
VAMP3-202ENST00000470357 C4BP0C0L5 1744 aa8.34□□□□□ -1.07
VAMP3-202ENST00000470357 GFRA3O60609 400 aa8.33□□□□□ -1.08
VAMP3-202ENST00000470357 RLBP1P12271 317 aa8.33□□□□□ -1.08
VAMP3-202ENST00000470357 COL5A3P25940 1745 aaPredicted RBP8.33□□□□□ -1.08
VAMP3-202ENST00000470357 CTHP32929 405 aa8.33□□□□□ -1.08
VAMP3-202ENST00000470357 TRIM32Q13049 653 aa8.33□□□□□ -1.08
VAMP3-202ENST00000470357 NPM2Q86SE8 214 aaKnown RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms