RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 BTBD6Q96KE9 485 aa5.73□□□□□ -1.49
RBM39-220ENST00000455343 ORAI2Q96SN7 254 aa5.73□□□□□ -1.49
RBM39-220ENST00000455343 KLF15Q9UIH9 416 aa5.73□□□□□ -1.49
RBM39-220ENST00000455343 BLMP54132 1417 aaPredicted RBP5.73□□□□□ -1.49
RBM39-220ENST00000455343 MYOM2P54296 1465 aa5.72□□□□□ -1.49
RBM39-220ENST00000455343 ZBTB7BO15156 539 aaPredicted RBP5.72□□□□□ -1.49
RBM39-220ENST00000455343 NOS2P35228 1153 aa5.72□□□□□ -1.49
RBM39-220ENST00000455343 ATP1A2P50993 1020 aa5.72□□□□□ -1.49
RBM39-220ENST00000455343 CLDN10P78369 228 aa5.72□□□□□ -1.49
RBM39-220ENST00000455343 LAMC2Q13753 1193 aa5.72□□□□□ -1.49
RBM39-220ENST00000455343 HDGFL1Q5TGJ6 251 aa5.72□□□□□ -1.49
RBM39-220ENST00000455343 ZNF468Q5VIY5 522 aaPredicted RBP5.72□□□□□ -1.49
RBM39-220ENST00000455343 CCDC102BQ68D86 513 aa5.72□□□□□ -1.49
RBM39-220ENST00000455343 DEFB132Q7Z7B7 95 aa5.72□□□□□ -1.49
RBM39-220ENST00000455343 TNS4Q8IZW8 715 aa5.72□□□□□ -1.49
RBM39-220ENST00000455343 SUV39H2Q9H5I1 410 aa5.72□□□□□ -1.49
RBM39-220ENST00000455343 STRN4Q9NRL3 753 aa5.72□□□□□ -1.49
RBM39-220ENST00000455343 GPC6Q9Y625 555 aaPredicted RBP5.72□□□□□ -1.49
RBM39-220ENST00000455343 PTPN23Q9H3S7 1636 aa5.72□□□□□ -1.49
RBM39-220ENST00000455343 XRN1Q8IZH2 1706 aaKnown RBP5.71□□□□□ -1.49
RBM39-220ENST00000455343 GNB5O14775 395 aa5.71□□□□□ -1.5
RBM39-220ENST00000455343 GRIN2CQ14957 1233 aa5.71□□□□□ -1.5
RBM39-220ENST00000455343 SH3PXD2AQ5TCZ1 1133 aa5.71□□□□□ -1.5
RBM39-220ENST00000455343 CHSY3Q70JA7 882 aa5.71□□□□□ -1.5
RBM39-220ENST00000455343 MARK1Q9P0L2 795 aa5.71□□□□□ -1.5
RBM39-220ENST00000455343 ZNF232Q9UNY5 417 aa5.71□□□□□ -1.5
RBM39-220ENST00000455343 CROCC2H7BZ55 1655 aa5.71□□□□□ -1.5
RBM39-220ENST00000455343 LAMC1P11047 1609 aa5.7□□□□□ -1.5
RBM39-220ENST00000455343 SERTM1A2A2V5 107 aa5.7□□□□□ -1.5
RBM39-220ENST00000455343 M0R2N6 131 aa5.7□□□□□ -1.5
RBM39-220ENST00000455343 PIK3R2O00459 728 aa5.7□□□□□ -1.5
RBM39-220ENST00000455343 PCBP4P57723 403 aaKnown RBP5.7□□□□□ -1.5
RBM39-220ENST00000455343 PSMA6P60900 246 aaKnown RBP5.7□□□□□ -1.5
RBM39-220ENST00000455343 LRRC69Q6ZNQ3 347 aa5.7□□□□□ -1.5
RBM39-220ENST00000455343 UNC5CLQ8IV45 518 aa5.7□□□□□ -1.5
RBM39-220ENST00000455343 SIX5Q8N196 739 aa5.7□□□□□ -1.5
RBM39-220ENST00000455343 LARGE2Q8N3Y3 721 aa5.7□□□□□ -1.5
RBM39-220ENST00000455343 OGFOD1Q8N543 542 aa5.7□□□□□ -1.5
RBM39-220ENST00000455343 C7orf43Q8WVR3 580 aa5.7□□□□□ -1.5
RBM39-220ENST00000455343 TSPAN10Q9H1Z9 355 aaPredicted RBP5.7□□□□□ -1.5
RBM39-220ENST00000455343 PRR12Q9ULL5 1215 aa5.7□□□□□ -1.5
RBM39-220ENST00000455343 PRAG1Q86YV5 1406 aa5.7□□□□□ -1.5
RBM39-220ENST00000455343 UNC13BO14795 1591 aa5.7□□□□□ -1.5
RBM39-220ENST00000455343 NRXN3Q9Y4C0 1643 aa5.7□□□□□ -1.5
RBM39-220ENST00000455343 SLIT2O94813 1529 aa5.69□□□□□ -1.5
RBM39-220ENST00000455343 ROBO2Q9HCK4 1378 aa5.69□□□□□ -1.5
RBM39-220ENST00000455343 HIRAP54198 1017 aaPredicted RBP5.69□□□□□ -1.5
RBM39-220ENST00000455343 RHPN1Q8TCX5 695 aa5.69□□□□□ -1.5
RBM39-220ENST00000455343 MKRN1Q9UHC7 482 aaKnown RBP5.69□□□□□ -1.5
RBM39-220ENST00000455343 NPHP3Q7Z494 1330 aa5.69□□□□□ -1.5
RBM39-220ENST00000455343 GCC2Q8IWJ2 1684 aa5.69□□□□□ -1.5
RBM39-220ENST00000455343 LOC105371045A0A1W2PR82 267 aa5.68□□□□□ -1.5
RBM39-220ENST00000455343 PALM3A6NDB9 673 aaPredicted RBP5.68□□□□□ -1.5
RBM39-220ENST00000455343 ADAM23O75077 832 aa5.68□□□□□ -1.5
RBM39-220ENST00000455343 DKK1O94907 266 aa5.68□□□□□ -1.5
RBM39-220ENST00000455343 GLMNQ92990 594 aa5.68□□□□□ -1.5
RBM39-220ENST00000455343 CLUAP1Q96AJ1 413 aa5.68□□□□□ -1.5
RBM39-220ENST00000455343 MDFIQ99750 246 aa5.68□□□□□ -1.5
RBM39-220ENST00000455343 NOP53Q9NZM5 478 aaKnown RBP5.68□□□□□ -1.5
RBM39-220ENST00000455343 RALGAPBQ86X10 1494 aa5.68□□□□□ -1.5
RBM39-220ENST00000455343 NUP155O75694 1391 aa5.67□□□□□ -1.5
RBM39-220ENST00000455343 ROCK1Q13464 1354 aa5.67□□□□□ -1.5
RBM39-220ENST00000455343 LRP5O75197 1615 aa5.67□□□□□ -1.5
RBM39-220ENST00000455343 COL22A1Q8NFW1 1626 aaPredicted RBP5.67□□□□□ -1.5
RBM39-220ENST00000455343 PXDNQ92626 1479 aa5.67□□□□□ -1.5
RBM39-220ENST00000455343 SFI1A8K8P3 1242 aa5.67□□□□□ -1.5
RBM39-220ENST00000455343 FOXO3O43524 673 aa5.67□□□□□ -1.5
RBM39-220ENST00000455343 VPS72Q15906 364 aa5.67□□□□□ -1.5
RBM39-220ENST00000455343 ZNF326Q5BKZ1 582 aaKnown RBP5.67□□□□□ -1.5
RBM39-220ENST00000455343 C1orf53Q5VUE5 145 aa5.67□□□□□ -1.5
RBM39-220ENST00000455343 SYT9Q86SS6 491 aa5.67□□□□□ -1.5
RBM39-220ENST00000455343 TSEN2Q8NCE0 465 aaKnown RBP5.67□□□□□ -1.5
RBM39-220ENST00000455343 ZNF594Q96JF6 807 aaPredicted RBP5.67□□□□□ -1.5
RBM39-220ENST00000455343 PHACTR1Q9C0D0 580 aa5.67□□□□□ -1.5
RBM39-220ENST00000455343 NEUROD4Q9HD90 331 aa5.67□□□□□ -1.5
RBM39-220ENST00000455343 CHMP3Q9Y3E7 222 aa5.67□□□□□ -1.5
RBM39-220ENST00000455343 MAFBQ9Y5Q3 323 aaPredicted RBP5.67□□□□□ -1.5
RBM39-220ENST00000455343 HFM1A2PYH4 1435 aa5.66□□□□□ -1.5
RBM39-220ENST00000455343 ELOA3CA0A087WX78 387 aaPredicted RBP5.66□□□□□ -1.5
RBM39-220ENST00000455343 ELOA3DA6NLF2 546 aaPredicted RBP5.66□□□□□ -1.5
RBM39-220ENST00000455343 SIN3BO75182 1162 aa5.66□□□□□ -1.5
RBM39-220ENST00000455343 BAG6P46379 1132 aa5.66□□□□□ -1.5
RBM39-220ENST00000455343 SFSWAPQ12872 951 aaKnown RBP5.66□□□□□ -1.5
RBM39-220ENST00000455343 SF3B2Q13435 895 aaKnown RBP5.66□□□□□ -1.5
RBM39-220ENST00000455343 FAM50AQ14320 339 aaKnown RBP5.66□□□□□ -1.5
RBM39-220ENST00000455343 ELOA3BQ3SY89 546 aa5.66□□□□□ -1.5
RBM39-220ENST00000455343 KRT27Q7Z3Y8 459 aa5.66□□□□□ -1.5
RBM39-220ENST00000455343 ELOA3Q8NG57 546 aa5.66□□□□□ -1.5
RBM39-220ENST00000455343 TRIM11Q96F44 468 aa5.66□□□□□ -1.5
RBM39-220ENST00000455343 HSH2DQ96JZ2 352 aa5.66□□□□□ -1.5
RBM39-220ENST00000455343 HCN4Q9Y3Q4 1203 aa5.66□□□□□ -1.5
RBM39-220ENST00000455343 MYO5BQ9ULV0 1848 aa5.66□□□□□ -1.5
RBM39-220ENST00000455343 GLI3P10071 1580 aa5.66□□□□□ -1.5
RBM39-220ENST00000455343 SPATA31A3Q5VYP0 1347 aa5.66□□□□□ -1.5
RBM39-220ENST00000455343 E9PCH4 1651 aa5.66□□□□□ -1.5
RBM39-220ENST00000455343 ADARB2-AS1A8MUL3 147 aa5.65□□□□□ -1.5
RBM39-220ENST00000455343 C21orf2O43822 256 aa5.65□□□□□ -1.5
RBM39-220ENST00000455343 PPP1R12BO60237 982 aaPredicted RBP5.65□□□□□ -1.5
RBM39-220ENST00000455343 XPCQ01831 940 aaPredicted RBP5.65□□□□□ -1.5
RBM39-220ENST00000455343 TYRO3Q06418 890 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms