RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 JAZF1Q86VZ6 243 aa5.51□□□□□ -1.53
USP54-202ENST00000413442 LNX2Q8N448 690 aa5.51□□□□□ -1.53
USP54-202ENST00000413442 OR13C2Q8NGS9 318 aa5.51□□□□□ -1.53
USP54-202ENST00000413442 OR2T4Q8NH00 348 aa5.51□□□□□ -1.53
USP54-202ENST00000413442 C10orf105Q8TEF2 133 aa5.51□□□□□ -1.53
USP54-202ENST00000413442 UBASH3BQ8TF42 649 aa5.51□□□□□ -1.53
USP54-202ENST00000413442 SNX33Q8WV41 574 aa5.51□□□□□ -1.53
USP54-202ENST00000413442 RDH5Q92781 318 aa5.51□□□□□ -1.53
USP54-202ENST00000413442 PTP4A1Q93096 173 aa5.51□□□□□ -1.53
USP54-202ENST00000413442 FAM46AQ96IP4 442 aaKnown RBP5.51□□□□□ -1.53
USP54-202ENST00000413442 C4orf45Q96LM5 186 aa5.51□□□□□ -1.53
USP54-202ENST00000413442 Q96M85 177 aa5.51□□□□□ -1.53
USP54-202ENST00000413442 ERMAPQ96PL5 475 aaPredicted RBP5.51□□□□□ -1.53
USP54-202ENST00000413442 VRK1Q99986 396 aaPredicted RBP5.51□□□□□ -1.53
USP54-202ENST00000413442 PIMREGQ9BSJ6 248 aa5.51□□□□□ -1.53
USP54-202ENST00000413442 THTPAQ9BU02 230 aa5.51□□□□□ -1.53
USP54-202ENST00000413442 ZNF416Q9BWM5 594 aa5.51□□□□□ -1.53
USP54-202ENST00000413442 CDADC1Q9BWV3 514 aa5.51□□□□□ -1.53
USP54-202ENST00000413442 OR2H1Q9GZK4 316 aa5.51□□□□□ -1.53
USP54-202ENST00000413442 EGLN1Q9GZT9 426 aa5.51□□□□□ -1.53
USP54-202ENST00000413442 RACGAP1Q9H0H5 632 aa5.51□□□□□ -1.53
USP54-202ENST00000413442 HDHD2Q9H0R4 259 aa5.51□□□□□ -1.53
USP54-202ENST00000413442 OR52D1Q9H346 318 aa5.51□□□□□ -1.53
USP54-202ENST00000413442 SP140LQ9H930 580 aa5.51□□□□□ -1.53
USP54-202ENST00000413442 ZNF556Q9HAH1 456 aa5.51□□□□□ -1.53
USP54-202ENST00000413442 DYNLRB1Q9NP97 96 aa5.51□□□□□ -1.53
USP54-202ENST00000413442 POLE4Q9NR33 117 aa5.51□□□□□ -1.53
USP54-202ENST00000413442 ENOPH1Q9UHY7 261 aa5.51□□□□□ -1.53
USP54-202ENST00000413442 KLHL21Q9UJP4 597 aa5.51□□□□□ -1.53
USP54-202ENST00000413442 NOP16Q9Y3C1 178 aaKnown RBP5.51□□□□□ -1.53
USP54-202ENST00000413442 UGT2A1Q9Y4X1 527 aa5.51□□□□□ -1.53
USP54-202ENST00000413442 IER3IP1Q9Y5U9 82 aa5.51□□□□□ -1.53
USP54-202ENST00000413442 LYVE1Q9Y5Y7 322 aa5.51□□□□□ -1.53
USP54-202ENST00000413442 CHD3Q12873 2000 aaKnown RBP5.51□□□□□ -1.53
USP54-202ENST00000413442 HIVEP1P15822 2718 aa5.51□□□□□ -1.53
USP54-202ENST00000413442 CCDC168Q8NDH2 2452 aa5.51□□□□□ -1.53
USP54-202ENST00000413442 POLQO75417 2590 aa5.51□□□□□ -1.53
USP54-202ENST00000413442 AKAP6Q13023 2319 aa5.51□□□□□ -1.53
USP54-202ENST00000413442 ROS1P08922 2347 aa5.5□□□□□ -1.53
USP54-202ENST00000413442 PLCE1Q9P212 2302 aa5.5□□□□□ -1.53
USP54-202ENST00000413442 TCRBV5S2A0A599 114 aa5.5□□□□□ -1.53
USP54-202ENST00000413442 PLSCR5A0PG75 271 aa5.5□□□□□ -1.53
USP54-202ENST00000413442 C17orf100A8MU93 164 aa5.5□□□□□ -1.53
USP54-202ENST00000413442 VWC2LB2RUY7 222 aa5.5□□□□□ -1.53
USP54-202ENST00000413442 SGCEO43556 437 aa5.5□□□□□ -1.53
USP54-202ENST00000413442 CD5LO43866 347 aa5.5□□□□□ -1.53
USP54-202ENST00000413442 PIP5K1CO60331 668 aa5.5□□□□□ -1.53
USP54-202ENST00000413442 SLC16A7O60669 478 aa5.5□□□□□ -1.53
USP54-202ENST00000413442 DEAF1O75398 565 aaPredicted RBP5.5□□□□□ -1.53
USP54-202ENST00000413442 FSTL3O95633 263 aa5.5□□□□□ -1.53
USP54-202ENST00000413442 IFNGP01579 166 aa5.5□□□□□ -1.53
USP54-202ENST00000413442 HMGN1P05114 100 aa5.5□□□□□ -1.53
USP54-202ENST00000413442 TACSTD2P09758 323 aa5.5□□□□□ -1.53
USP54-202ENST00000413442 ZNF823P16415 610 aa5.5□□□□□ -1.53
USP54-202ENST00000413442 SELEP16581 610 aa5.5□□□□□ -1.53
USP54-202ENST00000413442 ACHEP22303 614 aa5.5□□□□□ -1.53
USP54-202ENST00000413442 GPR4P46093 362 aa5.5□□□□□ -1.53
USP54-202ENST00000413442 TUBA1BP68363 451 aa5.5□□□□□ -1.53
USP54-202ENST00000413442 TUBA4AP68366 448 aa5.5□□□□□ -1.53
USP54-202ENST00000413442 LSM11P83369 360 aaKnown RBP eCLIP5.5□□□□□ -1.53
USP54-202ENST00000413442 MYBPC1Q00872 1141 aa5.5□□□□□ -1.53
USP54-202ENST00000413442 MS4A2Q01362 244 aa5.5□□□□□ -1.53
USP54-202ENST00000413442 CYB5R2Q6BCY4 276 aa5.5□□□□□ -1.53
USP54-202ENST00000413442 ZNF770Q6IQ21 691 aaPredicted RBP5.5□□□□□ -1.53
USP54-202ENST00000413442 PGBD2Q6P3X8 592 aa5.5□□□□□ -1.53
USP54-202ENST00000413442 RINLQ6ZS11 566 aa5.5□□□□□ -1.53
USP54-202ENST00000413442 TUBA1AQ71U36 451 aa5.5□□□□□ -1.53
USP54-202ENST00000413442 ZNF584Q8IVC4 421 aa5.5□□□□□ -1.53
USP54-202ENST00000413442 LRRC18Q8N456 261 aa5.5□□□□□ -1.53
USP54-202ENST00000413442 FAM86B1Q8N7N1 296 aa5.5□□□□□ -1.53
USP54-202ENST00000413442 OR2T33Q8NG76 320 aa5.5□□□□□ -1.53
USP54-202ENST00000413442 OR4C15Q8NGM1 316 aa5.5□□□□□ -1.53
USP54-202ENST00000413442 OR1J1Q8NGS3 322 aa5.5□□□□□ -1.53
USP54-202ENST00000413442 OR2AJ1Q8NGZ0 328 aa5.5□□□□□ -1.53
USP54-202ENST00000413442 OR52J3Q8NH60 311 aa5.5□□□□□ -1.53
USP54-202ENST00000413442 GIPC3Q8TF64 312 aa5.5□□□□□ -1.53
USP54-202ENST00000413442 NSMAFQ92636 917 aa5.5□□□□□ -1.53
USP54-202ENST00000413442 RASD2Q96D21 266 aa5.5□□□□□ -1.53
USP54-202ENST00000413442 DUS3LQ96G46 650 aaKnown RBP5.5□□□□□ -1.53
USP54-202ENST00000413442 COQ7Q99807 217 aa5.5□□□□□ -1.53
USP54-202ENST00000413442 IFT27Q9BW83 186 aa5.5□□□□□ -1.53
USP54-202ENST00000413442 CHID1Q9BWS9 393 aa5.5□□□□□ -1.53
USP54-202ENST00000413442 NUAK2Q9H093 628 aa5.5□□□□□ -1.53
USP54-202ENST00000413442 CHODLQ9H9P2 273 aa5.5□□□□□ -1.53
USP54-202ENST00000413442 HINT3Q9NQE9 182 aaKnown RBP5.5□□□□□ -1.53
USP54-202ENST00000413442 DNAJB9Q9UBS3 223 aa5.5□□□□□ -1.53
USP54-202ENST00000413442 LPAR3Q9UBY5 353 aa5.5□□□□□ -1.53
USP54-202ENST00000413442 DUSP13Q9UII6 198 aa5.5□□□□□ -1.53
USP54-202ENST00000413442 B9D1Q9UPM9 204 aa5.5□□□□□ -1.53
USP54-202ENST00000413442 CDH10Q9Y6N8 788 aa5.5□□□□□ -1.53
USP54-202ENST00000413442 A0A1W2PPL8 197 aa5.49□□□□□ -1.53
USP54-202ENST00000413442 DHRS12A0PJE2 317 aa5.49□□□□□ -1.53
USP54-202ENST00000413442 C5orf49A4QMS7 147 aa5.49□□□□□ -1.53
USP54-202ENST00000413442 ZNF503-AS2A6NEH8 195 aa5.49□□□□□ -1.53
USP54-202ENST00000413442 RNF223E7ERA6 249 aa5.49□□□□□ -1.53
USP54-202ENST00000413442 SOCS2O14508 198 aa5.49□□□□□ -1.53
USP54-202ENST00000413442 GSC2O15499 205 aa5.49□□□□□ -1.53
USP54-202ENST00000413442 SLC2A10O95528 541 aa5.49□□□□□ -1.53
USP54-202ENST00000413442 LY6G6DO95868 133 aa5.49□□□□□ -1.53
USP54-202ENST00000413442 GASTP01350 101 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms