RNA–Protein interactions for RNA: YPL018W

CTF19, Transcript of Outer kinetochore protein, needed for accurate chromosome segregation, yeastyeast

Gene CTF19, Length 1,110 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF19YPL018W ASP3-4P0CX79 362 aa6.94□□□□□ -1.3
CTF19YPL018W ASP3-1P0CZ17 362 aa6.94□□□□□ -1.3
CTF19YPL018W SPO12P17123 173 aa6.94□□□□□ -1.3
CTF19YPL018W GLN3P18494 730 aa6.94□□□□□ -1.3
CTF19YPL018W IME1P21190 360 aa6.94□□□□□ -1.3
CTF19YPL018W SCJ1P25303 377 aa6.94□□□□□ -1.3
CTF19YPL018W PDC6P26263 563 aaKnown RBP6.94□□□□□ -1.3
CTF19YPL018W PXL1P36166 706 aa6.94□□□□□ -1.3
CTF19YPL018W UBX7P38349 436 aa6.94□□□□□ -1.3
CTF19YPL018W FIR1P40020 876 aa6.94□□□□□ -1.3
CTF19YPL018W IES1P43579 692 aa6.94□□□□□ -1.3
CTF19YPL018W ALG11P53954 548 aaKnown RBP6.94□□□□□ -1.3
CTF19YPL018W RPA49Q01080 415 aaPredicted RBP6.94□□□□□ -1.3
CTF19YPL018W ELP4Q02884 456 aaKnown RBP6.94□□□□□ -1.3
CTF19YPL018W OPY2Q06810 360 aa6.94□□□□□ -1.3
CTF19YPL018W IWR1Q07532 353 aaPredicted RBP6.94□□□□□ -1.3
CTF19YPL018W SGT2Q12118 346 aaKnown RBP6.94□□□□□ -1.3
CTF19YPL018W YDL206WQ12424 762 aa6.94□□□□□ -1.3
CTF19YPL018W PPR1P07272 904 aaPredicted RBP6.93□□□□□ -1.3
CTF19YPL018W TOA1P32773 286 aa6.93□□□□□ -1.3
CTF19YPL018W JNM1P36224 373 aa6.93□□□□□ -1.3
CTF19YPL018W GRS1P38088 690 aaKnown RBP6.93□□□□□ -1.3
CTF19YPL018W YAP1801P38856 637 aa6.93□□□□□ -1.3
CTF19YPL018W SPO74P45819 413 aa6.93□□□□□ -1.3
CTF19YPL018W DAS1P47005 663 aa6.93□□□□□ -1.3
CTF19YPL018W CPR7P47103 393 aa6.93□□□□□ -1.3
CTF19YPL018W ISM1P48526 1002 aa6.93□□□□□ -1.3
CTF19YPL018W STE20Q03497 939 aaKnown RBP6.93□□□□□ -1.3
CTF19YPL018W YML082WQ04533 649 aaKnown RBP6.93□□□□□ -1.3
CTF19YPL018W VPS38Q05919 439 aa6.93□□□□□ -1.3
CTF19YPL018W MAG2Q06436 670 aaKnown RBP6.93□□□□□ -1.3
CTF19YPL018W OSH2Q12451 1283 aa6.93□□□□□ -1.3
CTF19YPL018W ECM29P38737 1868 aa6.92□□□□□ -1.3
CTF19YPL018W TUP1P16649 713 aa6.92□□□□□ -1.3
CTF19YPL018W KIP1P28742 1111 aa6.92□□□□□ -1.3
CTF19YPL018W RPT1P33299 467 aaKnown RBP6.92□□□□□ -1.3
CTF19YPL018W CSE2P33308 149 aa6.92□□□□□ -1.3
CTF19YPL018W WHI3P34761 661 aaKnown RBP6.92□□□□□ -1.3
CTF19YPL018W SPT23P35210 1082 aa6.92□□□□□ -1.3
CTF19YPL018W PCH2P38126 564 aa6.92□□□□□ -1.3
CTF19YPL018W PRE3P38624 215 aa6.92□□□□□ -1.3
CTF19YPL018W YHL026CP38740 315 aa6.92□□□□□ -1.3
CTF19YPL018W NAB3P38996 802 aaKnown RBP RIP-Chip data6.92□□□□□ -1.3not detected
CTF19YPL018W YER186CP40101 306 aa6.92□□□□□ -1.3
CTF19YPL018W ATG3P40344 310 aa6.92□□□□□ -1.3
CTF19YPL018W SDS3P40505 327 aa6.92□□□□□ -1.3
CTF19YPL018W SBE2P42223 864 aaKnown RBP6.92□□□□□ -1.3
CTF19YPL018W CLA4P48562 842 aa6.92□□□□□ -1.3
CTF19YPL018W UTP5Q04177 643 aaKnown RBP6.92□□□□□ -1.3
CTF19YPL018W ERF2Q06551 359 aa6.92□□□□□ -1.3
CTF19YPL018W ABP140Q08641 628 aaKnown RBP6.92□□□□□ -1.3
CTF19YPL018W PUS1Q12211 544 aaKnown RBP6.92□□□□□ -1.3
CTF19YPL018W MMP1Q12372 583 aa6.92□□□□□ -1.3
CTF19YPL018W YOL098CQ12496 1037 aa6.92□□□□□ -1.3
CTF19YPL018W SPT2P06843 333 aaPredicted RBP6.91□□□□□ -1.3
CTF19YPL018W MTF2P10849 440 aa6.91□□□□□ -1.3
CTF19YPL018W RRT12P25381 491 aa6.91□□□□□ -1.3
CTF19YPL018W RSA4P25382 515 aaKnown RBP6.91□□□□□ -1.3
CTF19YPL018W MAC1P35192 417 aa6.91□□□□□ -1.3
CTF19YPL018W ESL1P40456 1118 aa6.91□□□□□ -1.3
CTF19YPL018W SHQ1P40486 507 aaPredicted RBP6.91□□□□□ -1.3
CTF19YPL018W MMM1P41800 426 aa6.91□□□□□ -1.3
CTF19YPL018W FOL2P51601 243 aaKnown RBP6.91□□□□□ -1.3
CTF19YPL018W TAD1P53065 400 aa6.91□□□□□ -1.3
CTF19YPL018W DRN1P53255 507 aaKnown RBP6.91□□□□□ -1.3
CTF19YPL018W ESBP6P53918 673 aa6.91□□□□□ -1.3
CTF19YPL018W ERG5P54781 538 aa6.91□□□□□ -1.3
CTF19YPL018W YLR455WQ06188 304 aa6.91□□□□□ -1.3
CTF19YPL018W TSR1Q07381 788 aaKnown RBP6.91□□□□□ -1.3
CTF19YPL018W NEW1Q08972 1196 aaKnown RBP6.91□□□□□ -1.3
CTF19YPL018W YOR022CQ12204 715 aa6.91□□□□□ -1.3
CTF19YPL018W GIS3Q12418 502 aa6.91□□□□□ -1.3
CTF19YPL018W YPR015CQ12531 247 aa6.91□□□□□ -1.3
CTF19YPL018W CDC33P07260 213 aaKnown RBP6.9□□□□□ -1.3
CTF19YPL018W KEX2P13134 814 aa6.9□□□□□ -1.3
CTF19YPL018W CAD1P24813 409 aaKnown RBP6.9□□□□□ -1.3
CTF19YPL018W DAL2P25335 343 aa6.9□□□□□ -1.3
CTF19YPL018W CDC11P32458 415 aa6.9□□□□□ -1.3
CTF19YPL018W CSG2P35206 410 aa6.9□□□□□ -1.3
CTF19YPL018W HEL1P36113 551 aa6.9□□□□□ -1.3
CTF19YPL018W TBS1P38114 1094 aa6.9□□□□□ -1.3
CTF19YPL018W YHR054CP38780 354 aa6.9□□□□□ -1.3
CTF19YPL018W KAP123P40069 1113 aaKnown RBP6.9□□□□□ -1.3
CTF19YPL018W HXT8P40886 569 aa6.9□□□□□ -1.3
CTF19YPL018W JSN1P47135 1091 aaKnown RBP RIP-Chip data6.9□□□□□ -1.3not detected
CTF19YPL018W STB4P50104 949 aa6.9□□□□□ -1.3
CTF19YPL018W YGR035CP53222 116 aa6.9□□□□□ -1.3
CTF19YPL018W CTR9P89105 1077 aa6.9□□□□□ -1.3
CTF19YPL018W ESC2Q06340 456 aa6.9□□□□□ -1.3
CTF19YPL018W CDD1Q06549 142 aa6.9□□□□□ -1.3
CTF19YPL018W ESC8Q08119 714 aa6.9□□□□□ -1.3
CTF19YPL018W DNL4Q08387 944 aaPredicted RBP6.9□□□□□ -1.3
CTF19YPL018W GAL10P04397 699 aa6.89□□□□□ -1.31
CTF19YPL018W SNF1P06782 633 aaKnown RBP6.89□□□□□ -1.31
CTF19YPL018W TIF1P10081 395 aaKnown RBP6.89□□□□□ -1.31
CTF19YPL018W CDC42P19073 191 aa6.89□□□□□ -1.31
CTF19YPL018W COX11P19516 300 aaKnown RBP6.89□□□□□ -1.31
CTF19YPL018W EFB1P32471 206 aaKnown RBP6.89□□□□□ -1.31
CTF19YPL018W POA1P38218 177 aa6.89□□□□□ -1.31
CTF19YPL018W CAJ1P39101 391 aa6.89□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms