RNA–Protein interactions for RNA: YOR340C

RPA43, Transcript of RNA polymerase I subunit A43, yeastyeast

Gene RPA43, Length 981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA43YOR340C VPS30Q02948 557 aa4.41□□□□□ -1.7
RPA43YOR340C YDR132CQ03900 495 aa4.41□□□□□ -1.7
RPA43YOR340C CDA1Q06702 301 aa4.41□□□□□ -1.7
RPA43YOR340C RPP2AP05319 106 aaKnown RBP4.4□□□□□ -1.71
RPA43YOR340C SPE1P08432 466 aa4.4□□□□□ -1.71
RPA43YOR340C SSB1P11484 613 aaKnown RBP4.4□□□□□ -1.71
RPA43YOR340C RPL8AP17076 256 aaKnown RBP4.4□□□□□ -1.71
RPA43YOR340C SFP1P32432 683 aa4.4□□□□□ -1.71
RPA43YOR340C PEX6P33760 1030 aa4.4□□□□□ -1.71
RPA43YOR340C YEN1P40028 759 aa4.4□□□□□ -1.71
RPA43YOR340C SSB2P40150 613 aaKnown RBP4.4□□□□□ -1.71
RPA43YOR340C ALG2P43636 503 aa4.4□□□□□ -1.71
RPA43YOR340C GCV2P49095 1034 aa4.4□□□□□ -1.71
RPA43YOR340C YKE2P52553 114 aa4.4□□□□□ -1.71
RPA43YOR340C TPO1Q07824 586 aa4.4□□□□□ -1.71
RPA43YOR340C RIM15P43565 1770 aa4.4□□□□□ -1.71
RPA43YOR340C SNF2P22082 1703 aa4.39□□□□□ -1.71
RPA43YOR340C LEU2P04173 364 aaPredicted RBP4.39□□□□□ -1.71
RPA43YOR340C MPH2P0CD99 609 aa4.39□□□□□ -1.71
RPA43YOR340C DSS1P39112 969 aa4.39□□□□□ -1.71
RPA43YOR340C DOT5P40553 215 aa4.39□□□□□ -1.71
RPA43YOR340C ZDS1P50111 915 aaKnown RBP4.39□□□□□ -1.71
RPA43YOR340C GSF2Q04697 403 aaKnown RBP4.39□□□□□ -1.71
RPA43YOR340C DUS4Q06063 367 aa4.39□□□□□ -1.71
RPA43YOR340C ACK1Q07622 623 aaPredicted RBP4.39□□□□□ -1.71
RPA43YOR340C ENV7Q12003 364 aa4.39□□□□□ -1.71
RPA43YOR340C SLM3Q12093 417 aa4.39□□□□□ -1.71
RPA43YOR340C RPS9AO13516 197 aaKnown RBP4.38□□□□□ -1.71
RPA43YOR340C PHR1P05066 565 aaKnown RBP RIP-Chip data4.38□□□□□ -1.71not detected
RPA43YOR340C RAD53P22216 821 aa4.38□□□□□ -1.71
RPA43YOR340C EMC1P25574 760 aa4.38□□□□□ -1.71
RPA43YOR340C URA1P28272 314 aaPredicted RBP4.38□□□□□ -1.71
RPA43YOR340C TOM20P35180 183 aa4.38□□□□□ -1.71
RPA43YOR340C ATG19P35193 415 aa4.38□□□□□ -1.71
RPA43YOR340C JSN1P47135 1091 aaKnown RBP RIP-Chip data4.38□□□□□ -1.71not detected
RPA43YOR340C YAP6Q03935 383 aa4.38□□□□□ -1.71
RPA43YOR340C ADY3Q07732 790 aa4.38□□□□□ -1.71
RPA43YOR340C HMI1Q12039 706 aa4.38□□□□□ -1.71
RPA43YOR340C MDM12Q92328 271 aa4.38□□□□□ -1.71
RPA43YOR340C RSF2P46974 1380 aa4.38□□□□□ -1.71
RPA43YOR340C AUS1Q08409 1394 aa4.38□□□□□ -1.71
RPA43YOR340C STE13P33894 931 aa4.37□□□□□ -1.71
RPA43YOR340C EMC3P36039 253 aa4.37□□□□□ -1.71
RPA43YOR340C CEP3P40969 608 aa4.37□□□□□ -1.71
RPA43YOR340C GYP8P43570 497 aa4.37□□□□□ -1.71
RPA43YOR340C MET12P46151 657 aa4.37□□□□□ -1.71
RPA43YOR340C DAM1P53267 343 aa4.37□□□□□ -1.71
RPA43YOR340C VPS62P53285 467 aa4.37□□□□□ -1.71
RPA43YOR340C HIS5P07172 385 aa4.36□□□□□ -1.71
RPA43YOR340C CDC6P09119 513 aa4.36□□□□□ -1.71
RPA43YOR340C PRE10P21242 288 aaKnown RBP RIP-Chip data4.36□□□□□ -1.71not detected
RPA43YOR340C GSY1P23337 708 aa4.36□□□□□ -1.71
RPA43YOR340C VBA3P25594 458 aa4.36□□□□□ -1.71
RPA43YOR340C CDC20P26309 610 aa4.36□□□□□ -1.71
RPA43YOR340C TYE7P33122 291 aaPredicted RBP4.36□□□□□ -1.71
RPA43YOR340C RPN11P43588 306 aaKnown RBP4.36□□□□□ -1.71
RPA43YOR340C YJR008WP47085 338 aa4.36□□□□□ -1.71
RPA43YOR340C PUS2P53167 370 aa4.36□□□□□ -1.71
RPA43YOR340C NOP12Q08208 459 aaKnown RBP4.36□□□□□ -1.71
RPA43YOR340C RPD3P32561 433 aa4.35□□□□□ -1.71
RPA43YOR340C SPC29P33419 253 aa4.35□□□□□ -1.71
RPA43YOR340C NPR2P39923 615 aa4.35□□□□□ -1.71
RPA43YOR340C YIL108WP40483 696 aaKnown RBP4.35□□□□□ -1.71
RPA43YOR340C HLJ1P48353 224 aa4.35□□□□□ -1.71
RPA43YOR340C YGR283CP53336 341 aaPredicted RBP4.35□□□□□ -1.71
RPA43YOR340C NOG2P53742 486 aaKnown RBP4.35□□□□□ -1.71
RPA43YOR340C YNL193WP53870 558 aa4.35□□□□□ -1.71
RPA43YOR340C YKR011CQ02209 353 aa4.35□□□□□ -1.71
RPA43YOR340C YDR514CQ04408 483 aa4.35□□□□□ -1.71
RPA43YOR340C WHI4Q07655 649 aaKnown RBP4.35□□□□□ -1.71
RPA43YOR340C YLR001CQ07895 862 aa4.35□□□□□ -1.71
RPA43YOR340C NUP145P49687 1317 aa4.35□□□□□ -1.71
RPA43YOR340C YLR358CO13565 187 aa4.34□□□□□ -1.71
RPA43YOR340C DAL7P21826 554 aa4.34□□□□□ -1.71
RPA43YOR340C CLU1Q03690 1277 aaKnown RBP4.34□□□□□ -1.71
RPA43YOR340C SSL1Q04673 461 aaPredicted RBP4.34□□□□□ -1.71
RPA43YOR340C YLR224WQ05947 369 aa4.34□□□□□ -1.71
RPA43YOR340C TMA10Q06177 86 aa4.34□□□□□ -1.71
RPA43YOR340C HIM1Q06674 414 aa4.34□□□□□ -1.71
RPA43YOR340C REH1Q06709 432 aa4.34□□□□□ -1.71
RPA43YOR340C MET7Q08645 548 aa4.34□□□□□ -1.71
RPA43YOR340C YRF1-4O13559 1382 aa4.33□□□□□ -1.72
RPA43YOR340C MHP1P43638 1398 aa4.33□□□□□ -1.72
RPA43YOR340C ROM2P51862 1356 aaKnown RBP4.33□□□□□ -1.72
RPA43YOR340C CDC9P04819 755 aa4.33□□□□□ -1.72
RPA43YOR340C YEF3P16521 1044 aaKnown RBP4.33□□□□□ -1.72
RPA43YOR340C SED4P25365 1065 aa4.33□□□□□ -1.72
RPA43YOR340C SAP190P36123 1033 aa4.33□□□□□ -1.72
RPA43YOR340C PMT3P47190 753 aa4.33□□□□□ -1.72
RPA43YOR340C LYS4P49367 693 aaPredicted RBP4.33□□□□□ -1.72
RPA43YOR340C TAD1P53065 400 aa4.33□□□□□ -1.72
RPA43YOR340C HDA1P53973 706 aa4.33□□□□□ -1.72
RPA43YOR340C SRD1P09007 221 aa4.32□□□□□ -1.72
RPA43YOR340C CYS3P31373 394 aaKnown RBP4.32□□□□□ -1.72
RPA43YOR340C YKL133CP36066 463 aa4.32□□□□□ -1.72
RPA43YOR340C YKR075CP36155 307 aa4.32□□□□□ -1.72
RPA43YOR340C SHM2P37291 469 aaKnown RBP4.32□□□□□ -1.72
RPA43YOR340C PLB1P39105 664 aa4.32□□□□□ -1.72
RPA43YOR340C URM1P40554 99 aaPredicted RBP4.32□□□□□ -1.72
RPA43YOR340C YGR237CP50089 785 aa4.32□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 33.2 ms