RNA–Protein interactions for RNA: YOR216C

RUD3, Transcript of Golgi matrix protein, yeast

Gene RUD3, Length 1,455 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RUD3	YOR216C	PAN2	P53010	1115 aa	Predicted RBP	4.04	□□□□□ -1.76
RUD3	YOR216C	YGR283C	P53336	341 aa	Predicted RBP	4.04	□□□□□ -1.76
RUD3	YOR216C	GAD1	Q04792	585 aa		4.04	□□□□□ -1.76
RUD3	YOR216C	RPL8B	P29453	256 aa	Known RBP	4.03	□□□□□ -1.76
RUD3	YOR216C	SFB3	P38810	929 aa		4.03	□□□□□ -1.76
RUD3	YOR216C	EAF1	Q06337	982 aa		4.03	□□□□□ -1.76
RUD3	YOR216C	SET5	P38890	526 aa	Known RBP	4.02	□□□□□ -1.77
RUD3	YOR216C	ECM1	P39715	212 aa		4.02	□□□□□ -1.77
RUD3	YOR216C	MTL1	P53214	551 aa		4.02	□□□□□ -1.77
RUD3	YOR216C	FMO1	P38866	432 aa		4.01	□□□□□ -1.77
RUD3	YOR216C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.01	□□□□□ -1.77	not detected
RUD3	YOR216C	LYS9	P38999	446 aa		4.01	□□□□□ -1.77
RUD3	YOR216C	UBP6	P43593	499 aa	Known RBP	4.01	□□□□□ -1.77
RUD3	YOR216C	STB2	P46679	850 aa		4.01	□□□□□ -1.77
RUD3	YOR216C	YBR182C-A	Q8TGU6	64 aa		4.01	□□□□□ -1.77
RUD3	YOR216C	MVD1	P32377	396 aa	Known RBP	4	□□□□□ -1.77
RUD3	YOR216C	BPL1	P48445	690 aa	Predicted RBP	4	□□□□□ -1.77
RUD3	YOR216C	UBC9	P50623	157 aa	Predicted RBP	4	□□□□□ -1.77
RUD3	YOR216C	ZIP2	P53061	704 aa		4	□□□□□ -1.77
RUD3	YOR216C	ERP6	P53198	216 aa		4	□□□□□ -1.77
RUD3	YOR216C	FHN1	P53279	174 aa		4	□□□□□ -1.77
RUD3	YOR216C	ATG4	P53867	494 aa		4	□□□□□ -1.77
RUD3	YOR216C	RGT2	Q12300	763 aa		4	□□□□□ -1.77
RUD3	YOR216C	RGT1	P32862	1170 aa		3.99	□□□□□ -1.77
RUD3	YOR216C	RGC1	Q06108	1083 aa	Known RBP	3.99	□□□□□ -1.77
RUD3	YOR216C	PTP1	P25044	335 aa		3.98	□□□□□ -1.77
RUD3	YOR216C	ARE1	P25628	610 aa		3.98	□□□□□ -1.77
RUD3	YOR216C	PHO11	P35842	467 aa		3.98	□□□□□ -1.77
RUD3	YOR216C	PHO12	P38693	467 aa		3.98	□□□□□ -1.77
RUD3	YOR216C	REH1	Q06709	432 aa		3.98	□□□□□ -1.77
RUD3	YOR216C	CIR2	Q08822	631 aa		3.98	□□□□□ -1.77
RUD3	YOR216C	MLH3	Q12083	715 aa		3.98	□□□□□ -1.77
RUD3	YOR216C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	3.98	□□□□□ -1.77	not detected
RUD3	YOR216C	GRX1	P25373	110 aa	Known RBP	3.98	□□□□□ -1.77
RUD3	YOR216C	SPC29	P33419	253 aa		3.98	□□□□□ -1.77
RUD3	YOR216C	YHR112C	P38716	378 aa		3.98	□□□□□ -1.77
RUD3	YOR216C	NUP60	P39705	539 aa		3.98	□□□□□ -1.77
RUD3	YOR216C	NET1	P47035	1189 aa		3.98	□□□□□ -1.77
RUD3	YOR216C	SPO75	Q07798	868 aa		3.98	□□□□□ -1.77
RUD3	YOR216C	PGK1	P00560	416 aa	Known RBP	3.97	□□□□□ -1.77
RUD3	YOR216C	SHR5	P41912	237 aa		3.97	□□□□□ -1.77
RUD3	YOR216C	HXT16	P47185	567 aa		3.97	□□□□□ -1.77
RUD3	YOR216C	PRP31	P49704	494 aa	Predicted RBP	3.97	□□□□□ -1.77
RUD3	YOR216C	MPS1	P54199	764 aa		3.97	□□□□□ -1.77
RUD3	YOR216C	CTK1	Q03957	528 aa	Known RBP	3.97	□□□□□ -1.77
RUD3	YOR216C	YDR514C	Q04408	483 aa		3.97	□□□□□ -1.77
RUD3	YOR216C	ADE2	P21264	571 aa	Known RBP	3.96	□□□□□ -1.78
RUD3	YOR216C	CCR4	P31384	837 aa	Known RBP	3.96	□□□□□ -1.78
RUD3	YOR216C	MUP3	P38734	546 aa		3.96	□□□□□ -1.78
RUD3	YOR216C	RLP7	P40693	322 aa	Known RBP	3.96	□□□□□ -1.78
RUD3	YOR216C	YBP2	P53169	641 aa		3.96	□□□□□ -1.78
RUD3	YOR216C	NAN1	Q02931	896 aa	Known RBP	3.96	□□□□□ -1.78
RUD3	YOR216C	ERG11	P10614	530 aa		3.95	□□□□□ -1.78
RUD3	YOR216C	MET7	Q08645	548 aa		3.95	□□□□□ -1.78
RUD3	YOR216C	YLR149C	Q99296	730 aa		3.95	□□□□□ -1.78
RUD3	YOR216C	HRP1	Q99383	534 aa	Known RBP	3.95	□□□□□ -1.78
RUD3	YOR216C	DIF1	O13577	133 aa		3.94	□□□□□ -1.78
RUD3	YOR216C	ERG6	P25087	383 aa	Known RBP	3.94	□□□□□ -1.78
RUD3	YOR216C	APL2	P36000	726 aa	Predicted RBP	3.94	□□□□□ -1.78
RUD3	YOR216C	ZDS1	P50111	915 aa	Known RBP	3.94	□□□□□ -1.78
RUD3	YOR216C	SLK19	Q08581	821 aa	Known RBP	3.94	□□□□□ -1.78
RUD3	YOR216C	THR1	P17423	357 aa	Known RBP	3.93	□□□□□ -1.78
RUD3	YOR216C	ARG5,6	Q01217	863 aa		3.93	□□□□□ -1.78
RUD3	YOR216C	ATP25	Q03153	612 aa		3.93	□□□□□ -1.78
RUD3	YOR216C	TDA9	Q04545	1251 aa		3.93	□□□□□ -1.78
RUD3	YOR216C	USV1	Q12132	391 aa		3.93	□□□□□ -1.78
RUD3	YOR216C	TOM70	P07213	617 aa	Known RBP	3.92	□□□□□ -1.78
RUD3	YOR216C	HSP60	P19882	572 aa	Known RBP	3.92	□□□□□ -1.78
RUD3	YOR216C	FUB1	P25659	250 aa		3.92	□□□□□ -1.78
RUD3	YOR216C	SET3	P36124	751 aa		3.92	□□□□□ -1.78
RUD3	YOR216C	TRZ1	P36159	838 aa	Predicted RBP	3.92	□□□□□ -1.78
RUD3	YOR216C	XBP1	P40489	647 aa		3.92	□□□□□ -1.78
RUD3	YOR216C	ALG2	P43636	503 aa		3.92	□□□□□ -1.78
RUD3	YOR216C	TY4A-J	P47023	414 aa		3.92	□□□□□ -1.78
RUD3	YOR216C	YDR338C	Q05497	695 aa		3.92	□□□□□ -1.78
RUD3	YOR216C	SSF2	Q12153	453 aa	Predicted RBP	3.92	□□□□□ -1.78
RUD3	YOR216C	OSH2	Q12451	1283 aa		3.92	□□□□□ -1.78
RUD3	YOR216C	CIT1	P00890	479 aa		3.92	□□□□□ -1.78
RUD3	YOR216C	GMH1	P36125	273 aa		3.92	□□□□□ -1.78
RUD3	YOR216C	TAF8	Q03750	510 aa		3.92	□□□□□ -1.78
RUD3	YOR216C	ZRT2	Q12436	422 aa		3.92	□□□□□ -1.78
RUD3	YOR216C	NUP1	P20676	1076 aa		3.91	□□□□□ -1.78
RUD3	YOR216C	PER1	P25625	357 aa		3.91	□□□□□ -1.78
RUD3	YOR216C	YPL068C	Q02749	293 aa		3.91	□□□□□ -1.78
RUD3	YOR216C	YDL124W	Q07551	312 aa	Known RBP	3.91	□□□□□ -1.78
RUD3	YOR216C	GET2	P40056	285 aa		3.9	□□□□□ -1.79
RUD3	YOR216C	MCM21	Q06675	368 aa		3.9	□□□□□ -1.79
RUD3	YOR216C	WRS1	Q12109	432 aa	Known RBP	3.9	□□□□□ -1.79
RUD3	YOR216C	RAD4	P14736	754 aa		3.89	□□□□□ -1.79
RUD3	YOR216C	RPA135	P22138	1203 aa	Known RBP	3.89	□□□□□ -1.79
RUD3	YOR216C	BET3	P36149	193 aa		3.89	□□□□□ -1.79
RUD3	YOR216C	FMP30	Q02883	468 aa		3.89	□□□□□ -1.79
RUD3	YOR216C	STE12	P13574	688 aa		3.88	□□□□□ -1.79
RUD3	YOR216C	KCC4	P25389	1037 aa		3.88	□□□□□ -1.79
RUD3	YOR216C	YMC2	P38087	329 aa		3.88	□□□□□ -1.79
RUD3	YOR216C	CRP1	P38845	465 aa	Known RBP	3.88	□□□□□ -1.79
RUD3	YOR216C	MEP2	P41948	499 aa		3.88	□□□□□ -1.79
RUD3	YOR216C	ALY2	P47029	1046 aa		3.88	□□□□□ -1.79
RUD3	YOR216C	YGR125W	P53273	1036 aa		3.88	□□□□□ -1.79
RUD3	YOR216C	APT2	P36973	181 aa		3.87	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms