RNA–Protein interactions for RNA: YOR205C

GEP3, Transcript of Protein required for mitochondrial ribosome small subunit biogenesis, yeast

Gene GEP3, Length 1,671 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GEP3	YOR205C	CCC2	P38995	1004 aa		5.75	□□□□□ -1.49
GEP3	YOR205C	SPC72	P39723	622 aa		5.75	□□□□□ -1.49
GEP3	YOR205C	AFG3	P39925	761 aa		5.75	□□□□□ -1.49
GEP3	YOR205C	KAP123	P40069	1113 aa	Known RBP	5.75	□□□□□ -1.49
GEP3	YOR205C	AIM21	P40563	679 aa		5.75	□□□□□ -1.49
GEP3	YOR205C	SAD1	P43589	448 aa		5.75	□□□□□ -1.49
GEP3	YOR205C	DAS1	P47005	663 aa		5.75	□□□□□ -1.49
GEP3	YOR205C	AZR1	P50080	613 aa		5.75	□□□□□ -1.49
GEP3	YOR205C	DRN1	P53255	507 aa	Known RBP	5.75	□□□□□ -1.49
GEP3	YOR205C	YNL134C	P53912	376 aa	Known RBP	5.75	□□□□□ -1.49
GEP3	YOR205C	ALG11	P53954	548 aa	Known RBP	5.75	□□□□□ -1.49
GEP3	YOR205C	SYH1	Q02875	849 aa	Known RBP	5.75	□□□□□ -1.49
GEP3	YOR205C	YLR455W	Q06188	304 aa		5.75	□□□□□ -1.49
GEP3	YOR205C	ABP140	Q08641	628 aa	Known RBP	5.75	□□□□□ -1.49
GEP3	YOR205C	GIS3	Q12418	502 aa		5.75	□□□□□ -1.49
GEP3	YOR205C	SPT2	P06843	333 aa	Predicted RBP	5.74	□□□□□ -1.49
GEP3	YOR205C	RPL4A	P10664	362 aa	Known RBP	5.74	□□□□□ -1.49
GEP3	YOR205C	GLN3	P18494	730 aa		5.74	□□□□□ -1.49
GEP3	YOR205C	IME1	P21190	360 aa		5.74	□□□□□ -1.49
GEP3	YOR205C	ADE2	P21264	571 aa	Known RBP	5.74	□□□□□ -1.49
GEP3	YOR205C	RRT12	P25381	491 aa		5.74	□□□□□ -1.49
GEP3	YOR205C	DPB3	P27344	201 aa		5.74	□□□□□ -1.49
GEP3	YOR205C	EXO5	P38289	585 aa		5.74	□□□□□ -1.49
GEP3	YOR205C	BUD16	P39988	312 aa		5.74	□□□□□ -1.49
GEP3	YOR205C	YTA12	P40341	825 aa		5.74	□□□□□ -1.49
GEP3	YOR205C	ISM1	P48526	1002 aa		5.74	□□□□□ -1.49
GEP3	YOR205C	RPL4B	P49626	362 aa	Known RBP	5.74	□□□□□ -1.49
GEP3	YOR205C	DOT1	Q04089	582 aa	Known RBP	5.74	□□□□□ -1.49
GEP3	YOR205C	PUS1	Q12211	544 aa	Known RBP	5.74	□□□□□ -1.49
GEP3	YOR205C	OSH2	Q12451	1283 aa		5.74	□□□□□ -1.49
GEP3	YOR205C	NOP58	Q12499	511 aa	Known RBP	5.74	□□□□□ -1.49
GEP3	YOR205C	NOP14	Q99207	810 aa	Known RBP	5.74	□□□□□ -1.49
GEP3	YOR205C	ADE4	P04046	510 aa	Known RBP	5.73	□□□□□ -1.49
GEP3	YOR205C	FUB1	P25659	250 aa		5.73	□□□□□ -1.49
GEP3	YOR205C	PRR1	P28708	518 aa		5.73	□□□□□ -1.49
GEP3	YOR205C	CDC11	P32458	415 aa		5.73	□□□□□ -1.49
GEP3	YOR205C	EFB1	P32471	206 aa	Known RBP	5.73	□□□□□ -1.49
GEP3	YOR205C	RRN6	P32786	894 aa		5.73	□□□□□ -1.49
GEP3	YOR205C	CSG2	P35206	410 aa		5.73	□□□□□ -1.49
GEP3	YOR205C	BLI1	P35727	113 aa		5.73	□□□□□ -1.49
GEP3	YOR205C	BYE1	P36106	594 aa		5.73	□□□□□ -1.49
GEP3	YOR205C	DYS1	P38791	387 aa		5.73	□□□□□ -1.49
GEP3	YOR205C	SET5	P38890	526 aa	Known RBP	5.73	□□□□□ -1.49
GEP3	YOR205C	INP51	P40559	946 aa	Known RBP	5.73	□□□□□ -1.49
GEP3	YOR205C	KAP114	P53067	1004 aa		5.73	□□□□□ -1.49
GEP3	YOR205C	BOP3	P53958	396 aa		5.73	□□□□□ -1.49
GEP3	YOR205C	YMR114C	Q04471	368 aa	Known RBP	5.73	□□□□□ -1.49
GEP3	YOR205C	PCD1	Q12524	340 aa		5.73	□□□□□ -1.49
GEP3	YOR205C	AI5_BETA	Q9ZZX0	354 aa		5.73	□□□□□ -1.49
GEP3	YOR205C	GAL10	P04397	699 aa		5.72	□□□□□ -1.49
GEP3	YOR205C	RPS3	P05750	240 aa	Known RBP	5.72	□□□□□ -1.49
GEP3	YOR205C	HEM1	P09950	548 aa	Predicted RBP	5.72	□□□□□ -1.49
GEP3	YOR205C	YER152C	P10356	443 aa		5.72	□□□□□ -1.49
GEP3	YOR205C	CDC42	P19073	191 aa		5.72	□□□□□ -1.49
GEP3	YOR205C	TBS1	P38114	1094 aa		5.72	□□□□□ -1.49
GEP3	YOR205C	HIS2	P38635	335 aa		5.72	□□□□□ -1.49
GEP3	YOR205C	YHR054C	P38780	354 aa		5.72	□□□□□ -1.49
GEP3	YOR205C	MAD1	P40957	749 aa		5.72	□□□□□ -1.49
GEP3	YOR205C	GCV2	P49095	1034 aa		5.72	□□□□□ -1.49
GEP3	YOR205C	YGR111W	P53265	400 aa		5.72	□□□□□ -1.49
GEP3	YOR205C	CWC22	P53333	577 aa	Known RBP	5.72	□□□□□ -1.49
GEP3	YOR205C	MAL13	P53338	473 aa		5.72	□□□□□ -1.49
GEP3	YOR205C	MUK1	Q02866	612 aa		5.72	□□□□□ -1.49
GEP3	YOR205C	NGL3	Q03210	505 aa		5.72	□□□□□ -1.49
GEP3	YOR205C	PPM1	Q04081	328 aa		5.72	□□□□□ -1.49
GEP3	YOR205C	ZRT2	Q12436	422 aa		5.72	□□□□□ -1.49
GEP3	YOR205C	ECM3	Q99252	613 aa		5.72	□□□□□ -1.49
GEP3	YOR205C	TOM1	Q03280	3268 aa		5.72	□□□□□ -1.49
GEP3	YOR205C	GFA1	P14742	717 aa	Known RBP	5.72	□□□□□ -1.49
GEP3	YOR205C	STE11	P23561	717 aa		5.72	□□□□□ -1.49
GEP3	YOR205C	DBF4	P32325	704 aa		5.72	□□□□□ -1.49
GEP3	YOR205C	RPT1	P33299	467 aa	Known RBP	5.72	□□□□□ -1.49
GEP3	YOR205C	RRP1	P35178	278 aa	Predicted RBP	5.72	□□□□□ -1.49
GEP3	YOR205C	TDA3	P38758	523 aa		5.72	□□□□□ -1.49
GEP3	YOR205C	SMF1	P38925	575 aa		5.72	□□□□□ -1.49
GEP3	YOR205C	SAH1	P39954	449 aa	Known RBP	5.72	□□□□□ -1.49
GEP3	YOR205C	RPC17	P47076	161 aa		5.72	□□□□□ -1.49
GEP3	YOR205C	VPS70	P47161	811 aa		5.72	□□□□□ -1.49
GEP3	YOR205C	PRP31	P49704	494 aa	Predicted RBP	5.72	□□□□□ -1.49
GEP3	YOR205C	ALT1	P52893	592 aa		5.72	□□□□□ -1.49
GEP3	YOR205C	BTN2	P53286	410 aa		5.72	□□□□□ -1.49
GEP3	YOR205C	NOP13	P53883	403 aa	Known RBP RIP-Chip data	5.72	□□□□□ -1.49	not detected
GEP3	YOR205C	SDH5	Q08230	162 aa		5.72	□□□□□ -1.49
GEP3	YOR205C	DNL4	Q08387	944 aa	Predicted RBP	5.72	□□□□□ -1.49
GEP3	YOR205C	COX4	P04037	155 aa		5.71	□□□□□ -1.5
GEP3	YOR205C	RNR1	P21524	888 aa	Known RBP	5.71	□□□□□ -1.5
GEP3	YOR205C	GYP6	P32806	458 aa		5.71	□□□□□ -1.5
GEP3	YOR205C	RCK2	P38623	610 aa		5.71	□□□□□ -1.5
GEP3	YOR205C	YAP1801	P38856	637 aa		5.71	□□□□□ -1.5
GEP3	YOR205C	GEM1	P39722	662 aa		5.71	□□□□□ -1.5
GEP3	YOR205C	YER186C	P40101	306 aa		5.71	□□□□□ -1.5
GEP3	YOR205C	YJR054W	P47114	497 aa		5.71	□□□□□ -1.5
GEP3	YOR205C	HOP2	P53187	214 aa		5.71	□□□□□ -1.5
GEP3	YOR205C	YGR130C	P53278	816 aa		5.71	□□□□□ -1.5
GEP3	YOR205C	RRB1	Q04225	511 aa	Known RBP	5.71	□□□□□ -1.5
GEP3	YOR205C	ERV41	Q04651	352 aa		5.71	□□□□□ -1.5
GEP3	YOR205C	ATG23	Q06671	453 aa		5.71	□□□□□ -1.5
GEP3	YOR205C	SIL1	Q08199	421 aa		5.71	□□□□□ -1.5
GEP3	YOR205C	YDR524C-B	Q3E6R4	66 aa		5.71	□□□□□ -1.5
GEP3	YOR205C	ERG11	P10614	530 aa		5.7	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 24.6 ms