RNA–Protein interactions for RNA: YOR069W

VPS5, Transcript of Nexin-1 homolog, yeastyeast

Gene VPS5, Length 2,028 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS5YOR069W SPC72P39723 622 aa6.24□□□□□ -1.41
VPS5YOR069W NOP9P47077 666 aaKnown RBP6.24□□□□□ -1.41
VPS5YOR069W RNR4P49723 345 aaKnown RBP6.24□□□□□ -1.41
VPS5YOR069W NBP1P52919 319 aaPredicted RBP6.24□□□□□ -1.41
VPS5YOR069W YNL247WP53852 767 aaKnown RBP6.24□□□□□ -1.41
VPS5YOR069W MUB1Q03162 620 aa6.24□□□□□ -1.41
VPS5YOR069W YLR297WQ05899 129 aa6.24□□□□□ -1.41
VPS5YOR069W GET4Q12125 312 aa6.24□□□□□ -1.41
VPS5YOR069W RIM15P43565 1770 aa6.24□□□□□ -1.41
VPS5YOR069W GCR1P07261 785 aa6.23□□□□□ -1.41
VPS5YOR069W SEC63P14906 663 aa6.23□□□□□ -1.41
VPS5YOR069W GSY1P23337 708 aa6.23□□□□□ -1.41
VPS5YOR069W CAP1P28495 268 aaKnown RBP6.23□□□□□ -1.41
VPS5YOR069W HEM3P28789 327 aa6.23□□□□□ -1.41
VPS5YOR069W MDL2P33311 773 aa6.23□□□□□ -1.41
VPS5YOR069W YKR015CP36111 568 aa6.23□□□□□ -1.41
VPS5YOR069W CCL1P37366 393 aa6.23□□□□□ -1.41
VPS5YOR069W YHL008CP38750 627 aa6.23□□□□□ -1.41
VPS5YOR069W ORC6P38826 435 aa6.23□□□□□ -1.41
VPS5YOR069W ARB1P40024 610 aaKnown RBP6.23□□□□□ -1.41
VPS5YOR069W DPH1P40487 425 aaKnown RBP6.23□□□□□ -1.41
VPS5YOR069W TAF1P46677 1066 aa6.23□□□□□ -1.41
VPS5YOR069W SQS1P53866 767 aaKnown RBP6.23□□□□□ -1.41
VPS5YOR069W TIM11P81449 96 aaPredicted RBP6.23□□□□□ -1.41
VPS5YOR069W FMN1Q03778 218 aa6.23□□□□□ -1.41
VPS5YOR069W YDR179W-AQ03983 463 aa6.23□□□□□ -1.41
VPS5YOR069W RGA2Q06407 1009 aa6.23□□□□□ -1.41
VPS5YOR069W YLL054CQ12244 843 aa6.23□□□□□ -1.41
VPS5YOR069W MED1Q12321 566 aa6.23□□□□□ -1.41
VPS5YOR069W CMD1P06787 147 aaKnown RBP6.23□□□□□ -1.41
VPS5YOR069W COY1P34237 679 aa6.23□□□□□ -1.41
VPS5YOR069W UBP13P38187 747 aa6.23□□□□□ -1.41
VPS5YOR069W SPC97P38863 823 aa6.23□□□□□ -1.41
VPS5YOR069W UTP22P53254 1237 aaPredicted RBP6.23□□□□□ -1.41
VPS5YOR069W PTA1Q01329 785 aaPredicted RBP6.23□□□□□ -1.41
VPS5YOR069W YML082WQ04533 649 aaKnown RBP6.23□□□□□ -1.41
VPS5YOR069W ARR1Q06596 294 aa6.23□□□□□ -1.41
VPS5YOR069W RIX7Q07844 837 aaKnown RBP6.23□□□□□ -1.41
VPS5YOR069W YPL260WQ08977 551 aa6.23□□□□□ -1.41
VPS5YOR069W MDM20Q12387 796 aaKnown RBP6.23□□□□□ -1.41
VPS5YOR069W SEM1O94742 89 aa6.22□□□□□ -1.41
VPS5YOR069W YML002WP0CF17 737 aa6.22□□□□□ -1.41
VPS5YOR069W SUP45P12385 437 aaKnown RBP6.22□□□□□ -1.41
VPS5YOR069W EXO70P19658 623 aa6.22□□□□□ -1.41
VPS5YOR069W NPP1P25353 742 aa6.22□□□□□ -1.41
VPS5YOR069W DBP7P36120 742 aaKnown RBP6.22□□□□□ -1.41
VPS5YOR069W TRZ1P36159 838 aaPredicted RBP6.22□□□□□ -1.41
VPS5YOR069W TRM5P38793 499 aa6.22□□□□□ -1.41
VPS5YOR069W PFK26P40433 827 aaKnown RBP6.22□□□□□ -1.41
VPS5YOR069W DIM1P41819 318 aaKnown RBP6.22□□□□□ -1.41
VPS5YOR069W TFG1P41895 735 aaPredicted RBP6.22□□□□□ -1.41
VPS5YOR069W MIG2P53035 382 aa6.22□□□□□ -1.41
VPS5YOR069W RSM24Q03976 319 aa6.22□□□□□ -1.41
VPS5YOR069W YMR027WQ04371 470 aa6.22□□□□□ -1.41
VPS5YOR069W TSR2Q06672 205 aaKnown RBP6.22□□□□□ -1.41
VPS5YOR069W YDL057WQ07379 328 aa6.22□□□□□ -1.41
VPS5YOR069W NYV1Q12255 253 aa6.22□□□□□ -1.41
VPS5YOR069W PGK1P00560 416 aaKnown RBP6.21□□□□□ -1.41
VPS5YOR069W MPH2P0CD99 609 aa6.21□□□□□ -1.41
VPS5YOR069W ACE2P21192 770 aa6.21□□□□□ -1.41
VPS5YOR069W MRF1P30775 413 aaPredicted RBP6.21□□□□□ -1.41
VPS5YOR069W SEC6P32844 805 aa6.21□□□□□ -1.41
VPS5YOR069W NUP120P35729 1037 aa6.21□□□□□ -1.41
VPS5YOR069W PAM1P37304 830 aaKnown RBP6.21□□□□□ -1.41
VPS5YOR069W NCL1P38205 684 aaKnown RBP6.21□□□□□ -1.41
VPS5YOR069W EXO5P38289 585 aa6.21□□□□□ -1.41
VPS5YOR069W ETP1P38748 585 aaKnown RBP6.21□□□□□ -1.41
VPS5YOR069W ICP55P40051 511 aa6.21□□□□□ -1.41
VPS5YOR069W ALA1P40825 983 aaKnown RBP6.21□□□□□ -1.41
VPS5YOR069W LIA1P47120 325 aaKnown RBP6.21□□□□□ -1.41
VPS5YOR069W SHE4P51534 789 aa6.21□□□□□ -1.41
VPS5YOR069W PIP2P52960 996 aa6.21□□□□□ -1.41
VPS5YOR069W VID30P53076 958 aa6.21□□□□□ -1.41
VPS5YOR069W ESBP6P53918 673 aa6.21□□□□□ -1.41
VPS5YOR069W TMA20P89886 181 aaPredicted RBP6.21□□□□□ -1.41
VPS5YOR069W DPH6Q12429 685 aa6.21□□□□□ -1.41
VPS5YOR069W COBP00163 385 aa6.21□□□□□ -1.42
VPS5YOR069W SWI6P09959 803 aa6.21□□□□□ -1.42
VPS5YOR069W VMA2P16140 517 aaKnown RBP6.21□□□□□ -1.42
VPS5YOR069W PFK1P16861 987 aaKnown RBP6.21□□□□□ -1.42
VPS5YOR069W CLB2P24869 491 aa6.21□□□□□ -1.42
VPS5YOR069W AAD3P25612 363 aa6.21□□□□□ -1.42
VPS5YOR069W SET3P36124 751 aa6.21□□□□□ -1.42
VPS5YOR069W YMR134WP40207 237 aa6.21□□□□□ -1.42
VPS5YOR069W CAB2P40506 365 aa6.21□□□□□ -1.42
VPS5YOR069W COS5P47187 383 aa6.21□□□□□ -1.42
VPS5YOR069W VMA10P48836 114 aaKnown RBP6.21□□□□□ -1.42
VPS5YOR069W DCP2P53550 970 aaKnown RBP6.21□□□□□ -1.42
VPS5YOR069W DAK1P54838 584 aaKnown RBP6.21□□□□□ -1.42
VPS5YOR069W UBP3Q01477 912 aaKnown RBP RIP-Chip data6.21□□□□□ -1.42not detected
VPS5YOR069W AIM33Q04516 312 aa6.21□□□□□ -1.42
VPS5YOR069W ADY3Q07732 790 aa6.21□□□□□ -1.42
VPS5YOR069W DBP10Q12389 995 aaKnown RBP6.21□□□□□ -1.42
VPS5YOR069W SNF1P06782 633 aaKnown RBP6.2□□□□□ -1.42
VPS5YOR069W TPS2P31688 896 aaKnown RBP6.2□□□□□ -1.42
VPS5YOR069W DBF4P32325 704 aa6.2□□□□□ -1.42
VPS5YOR069W DGR2P32330 852 aa6.2□□□□□ -1.42
VPS5YOR069W SPT16P32558 1035 aaKnown RBP6.2□□□□□ -1.42
VPS5YOR069W PTH2P34222 208 aa6.2□□□□□ -1.42
VPS5YOR069W SLM4P38247 162 aa6.2□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 34 ms