RNA–Protein interactions for RNA: YOR066W

MSA1, Transcript of Activator of G1-specific transcription factors MBF and SBF, yeast

Gene MSA1, Length 1,890 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSA1	YOR066W	SAK1	P38990	1142 aa		4.95	□□□□□ -1.62
MSA1	YOR066W	PZF1	P39933	429 aa		4.95	□□□□□ -1.62
MSA1	YOR066W	URM1	P40554	99 aa	Predicted RBP	4.95	□□□□□ -1.62
MSA1	YOR066W	MTR3	P48240	250 aa	Predicted RBP	4.95	□□□□□ -1.62
MSA1	YOR066W	GTF1	P53260	183 aa	Predicted RBP	4.95	□□□□□ -1.62
MSA1	YOR066W	ADY3	Q07732	790 aa		4.95	□□□□□ -1.62
MSA1	YOR066W	RRP6	Q12149	733 aa	Known RBP	4.95	□□□□□ -1.62
MSA1	YOR066W	PGI1	P12709	554 aa	Known RBP	4.94	□□□□□ -1.62
MSA1	YOR066W	SED4	P25365	1065 aa		4.94	□□□□□ -1.62
MSA1	YOR066W	KCC4	P25389	1037 aa		4.94	□□□□□ -1.62
MSA1	YOR066W	YKR073C	P36153	106 aa		4.94	□□□□□ -1.62
MSA1	YOR066W	FAT1	P38225	669 aa		4.94	□□□□□ -1.62
MSA1	YOR066W	RSC8	P43609	557 aa	Known RBP	4.94	□□□□□ -1.62
MSA1	YOR066W	MET12	P46151	657 aa		4.94	□□□□□ -1.62
MSA1	YOR066W	RNR4	P49723	345 aa	Known RBP	4.94	□□□□□ -1.62
MSA1	YOR066W	YGR021W	P53212	290 aa		4.94	□□□□□ -1.62
MSA1	YOR066W	BRE5	P53741	515 aa	Known RBP	4.94	□□□□□ -1.62
MSA1	YOR066W	ORC4	P54791	529 aa		4.94	□□□□□ -1.62
MSA1	YOR066W	PLB2	Q03674	706 aa		4.94	□□□□□ -1.62
MSA1	YOR066W	ROT1	Q03691	256 aa		4.94	□□□□□ -1.62
MSA1	YOR066W	ECM38	Q05902	660 aa	Predicted RBP	4.94	□□□□□ -1.62
MSA1	YOR066W	SGD1	Q06132	899 aa		4.94	□□□□□ -1.62
MSA1	YOR066W	BUD21	Q08492	214 aa	Predicted RBP	4.94	□□□□□ -1.62
MSA1	YOR066W	YOR352W	Q08816	343 aa		4.94	□□□□□ -1.62
MSA1	YOR066W	UPC2	Q12151	913 aa		4.94	□□□□□ -1.62
MSA1	YOR066W	HCA4	P20448	770 aa	Known RBP	4.94	□□□□□ -1.62
MSA1	YOR066W	DPB3	P27344	201 aa		4.94	□□□□□ -1.62
MSA1	YOR066W	RIM4	P38741	713 aa		4.94	□□□□□ -1.62
MSA1	YOR066W	GCV2	P49095	1034 aa		4.94	□□□□□ -1.62
MSA1	YOR066W	VPS72	Q03388	795 aa		4.94	□□□□□ -1.62
MSA1	YOR066W	ECM16	Q04217	1267 aa	Known RBP	4.94	□□□□□ -1.62
MSA1	YOR066W	MLC2	Q06580	163 aa		4.94	□□□□□ -1.62
MSA1	YOR066W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.94	□□□□□ -1.62	not detected
MSA1	YOR066W	SWI6	P09959	803 aa		4.93	□□□□□ -1.62
MSA1	YOR066W	TOS1	P38288	455 aa		4.93	□□□□□ -1.62
MSA1	YOR066W	YHR202W	P38887	602 aa		4.93	□□□□□ -1.62
MSA1	YOR066W	IES5	P40060	125 aa		4.93	□□□□□ -1.62
MSA1	YOR066W	TAN1	P53072	289 aa	Predicted RBP	4.93	□□□□□ -1.62
MSA1	YOR066W	GPR1	Q12361	961 aa		4.93	□□□□□ -1.62
MSA1	YOR066W	AKL1	P38080	1108 aa	Known RBP	4.92	□□□□□ -1.62
MSA1	YOR066W	RRP8	P38961	392 aa	Known RBP	4.92	□□□□□ -1.62
MSA1	YOR066W	BEM4	P39011	633 aa		4.92	□□□□□ -1.62
MSA1	YOR066W	SNO2	P53823	222 aa		4.92	□□□□□ -1.62
MSA1	YOR066W	LEE1	Q02799	301 aa	Known RBP	4.92	□□□□□ -1.62
MSA1	YOR066W	MUS81	Q04149	632 aa	Predicted RBP	4.92	□□□□□ -1.62
MSA1	YOR066W	YDL177C	Q12257	170 aa		4.92	□□□□□ -1.62
MSA1	YOR066W	HIS5	P07172	385 aa		4.92	□□□□□ -1.62
MSA1	YOR066W	PFK1	P16861	987 aa	Known RBP	4.92	□□□□□ -1.62
MSA1	YOR066W	ATP12	P22135	325 aa		4.92	□□□□□ -1.62
MSA1	YOR066W	STE14	P32584	239 aa		4.92	□□□□□ -1.62
MSA1	YOR066W	LAM1	P38851	1228 aa		4.92	□□□□□ -1.62
MSA1	YOR066W	VHR1	P40522	640 aa		4.92	□□□□□ -1.62
MSA1	YOR066W	HIS6	P40545	261 aa		4.92	□□□□□ -1.62
MSA1	YOR066W	PFA3	P42836	336 aa		4.92	□□□□□ -1.62
MSA1	YOR066W	SET2	P46995	733 aa	Known RBP	4.92	□□□□□ -1.62
MSA1	YOR066W	CCT8	P47079	568 aa	Known RBP	4.92	□□□□□ -1.62
MSA1	YOR066W	NOP15	P53927	220 aa	Predicted RBP	4.92	□□□□□ -1.62
MSA1	YOR066W	ASM4	Q05166	528 aa		4.92	□□□□□ -1.62
MSA1	YOR066W	YLR407W	Q06070	228 aa		4.92	□□□□□ -1.62
MSA1	YOR066W	GLN4	P13188	809 aa	Known RBP	4.91	□□□□□ -1.62
MSA1	YOR066W	CHA4	P43634	648 aa		4.91	□□□□□ -1.62
MSA1	YOR066W	NCS6	P53088	359 aa		4.91	□□□□□ -1.62
MSA1	YOR066W	YBP2	P53169	641 aa		4.91	□□□□□ -1.62
MSA1	YOR066W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.62	not detected
MSA1	YOR066W	YHL041W	P38730	149 aa		4.9	□□□□□ -1.62
MSA1	YOR066W	PAP2	P53632	584 aa	Known RBP	4.9	□□□□□ -1.62
MSA1	YOR066W	CNM67	P53865	581 aa	Known RBP	4.9	□□□□□ -1.62
MSA1	YOR066W	ASI2	P53895	289 aa		4.9	□□□□□ -1.62
MSA1	YOR066W	YMR210W	Q03649	449 aa		4.9	□□□□□ -1.62
MSA1	YOR066W	HMI1	Q12039	706 aa		4.9	□□□□□ -1.62
MSA1	YOR066W	SWM1	Q12379	170 aa		4.9	□□□□□ -1.62
MSA1	YOR066W	NGG1	P32494	702 aa		4.9	□□□□□ -1.63
MSA1	YOR066W	APN2	P38207	520 aa		4.9	□□□□□ -1.63
MSA1	YOR066W	MEF2	P39677	819 aa		4.9	□□□□□ -1.63
MSA1	YOR066W	VID28	P40547	921 aa		4.9	□□□□□ -1.63
MSA1	YOR066W	BRE4	Q07660	1125 aa		4.9	□□□□□ -1.63
MSA1	YOR066W	GPB1	Q08886	897 aa		4.9	□□□□□ -1.63
MSA1	YOR066W	CDC6	P09119	513 aa		4.89	□□□□□ -1.63
MSA1	YOR066W	CDC26	P14724	124 aa		4.89	□□□□□ -1.63
MSA1	YOR066W	EMC1	P25574	760 aa		4.89	□□□□□ -1.63
MSA1	YOR066W	PTH2	P34222	208 aa		4.89	□□□□□ -1.63
MSA1	YOR066W	MSS4	P38994	779 aa		4.89	□□□□□ -1.63
MSA1	YOR066W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
MSA1	YOR066W	PRP31	P49704	494 aa	Predicted RBP	4.89	□□□□□ -1.63
MSA1	YOR066W	HOL1	P53389	586 aa		4.89	□□□□□ -1.63
MSA1	YOR066W	PKH1	Q03407	766 aa		4.89	□□□□□ -1.63
MSA1	YOR066W	RXT3	Q07458	294 aa		4.89	□□□□□ -1.63
MSA1	YOR066W	TUB3	P09734	445 aa	Known RBP	4.88	□□□□□ -1.63
MSA1	YOR066W	IMG2	P25642	146 aa	Predicted RBP	4.88	□□□□□ -1.63
MSA1	YOR066W	SEC21	P32074	935 aa	Known RBP	4.88	□□□□□ -1.63
MSA1	YOR066W	YKL222C	P35995	705 aa		4.88	□□□□□ -1.63
MSA1	YOR066W	SRP68	P38687	599 aa	Known RBP	4.88	□□□□□ -1.63
MSA1	YOR066W	MRPL22	P53881	309 aa		4.88	□□□□□ -1.63
MSA1	YOR066W	DUS4	Q06063	367 aa		4.88	□□□□□ -1.63
MSA1	YOR066W	NOP12	Q08208	459 aa	Known RBP	4.88	□□□□□ -1.63
MSA1	YOR066W	HOP1	P20050	605 aa		4.88	□□□□□ -1.63
MSA1	YOR066W	MRS6	P32864	603 aa	Known RBP	4.88	□□□□□ -1.63
MSA1	YOR066W	LIP5	P32875	414 aa		4.88	□□□□□ -1.63
MSA1	YOR066W	KTR4	P38131	464 aa		4.88	□□□□□ -1.63
MSA1	YOR066W	GID8	P40208	455 aa		4.88	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms