RNA–Protein interactions for RNA: YOR054C

VHS3, Transcript of Negative regulatory subunit of protein phosphatase 1 Ppz1p, yeastyeast

Gene VHS3, Length 2,025 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VHS3YOR054C SEC63P14906 663 aa4.3□□□□□ -1.72
VHS3YOR054C SEN2P16658 377 aa4.3□□□□□ -1.72
VHS3YOR054C SRV2P17555 526 aaKnown RBP4.3□□□□□ -1.72
VHS3YOR054C KGD2P19262 463 aaPredicted RBP4.3□□□□□ -1.72
VHS3YOR054C YDJ1P25491 409 aaKnown RBP4.3□□□□□ -1.72
VHS3YOR054C ILV6P25605 309 aaKnown RBP4.3□□□□□ -1.72
VHS3YOR054C YCR016WP25617 290 aaKnown RBP4.3□□□□□ -1.72
VHS3YOR054C YJU2P28320 278 aaPredicted RBP4.3□□□□□ -1.72
VHS3YOR054C PEP7P32609 515 aa4.3□□□□□ -1.72
VHS3YOR054C AFG2P32794 780 aa4.3□□□□□ -1.72
VHS3YOR054C COY1P34237 679 aa4.3□□□□□ -1.72
VHS3YOR054C AST1P35183 429 aa4.3□□□□□ -1.72
VHS3YOR054C RCN1P36054 211 aa4.3□□□□□ -1.72
VHS3YOR054C STM1P39015 273 aaKnown RBP4.3□□□□□ -1.72
VHS3YOR054C NPT1P39683 429 aaKnown RBP4.3□□□□□ -1.72
VHS3YOR054C ALG5P40350 334 aa4.3□□□□□ -1.72
VHS3YOR054C SDS3P40505 327 aa4.3□□□□□ -1.72
VHS3YOR054C EPL1P43572 832 aa4.3□□□□□ -1.72
VHS3YOR054C URB2P47108 1174 aa4.3□□□□□ -1.72
VHS3YOR054C PIB2P53191 635 aa4.3□□□□□ -1.72
VHS3YOR054C ALO1P54783 526 aaKnown RBP4.3□□□□□ -1.72
VHS3YOR054C RPT6Q01939 405 aaKnown RBP4.3□□□□□ -1.72
VHS3YOR054C SLU7Q02775 382 aaKnown RBP4.3□□□□□ -1.72
VHS3YOR054C MMT1Q03218 510 aa4.3□□□□□ -1.72
VHS3YOR054C SHE9Q04172 456 aa4.3□□□□□ -1.72
VHS3YOR054C DON1Q05610 365 aa4.3□□□□□ -1.72
VHS3YOR054C GAS4Q08271 471 aa4.3□□□□□ -1.72
VHS3YOR054C AIR2Q12476 344 aaKnown RBP4.3□□□□□ -1.72
VHS3YOR054C FAS2P19097 1887 aaKnown RBP4.29□□□□□ -1.72
VHS3YOR054C MRP7P12687 371 aa4.29□□□□□ -1.72
VHS3YOR054C TEC1P18412 486 aa4.29□□□□□ -1.72
VHS3YOR054C SIT4P20604 311 aa4.29□□□□□ -1.72
VHS3YOR054C PDC6P26263 563 aaKnown RBP4.29□□□□□ -1.72
VHS3YOR054C URA1P28272 314 aaPredicted RBP4.29□□□□□ -1.72
VHS3YOR054C NAM7P30771 971 aaKnown RBP4.29□□□□□ -1.72
VHS3YOR054C UBC6P33296 250 aaPredicted RBP4.29□□□□□ -1.72
VHS3YOR054C APD1P38281 316 aa4.29□□□□□ -1.72
VHS3YOR054C SLI15P38283 698 aa4.29□□□□□ -1.72
VHS3YOR054C MIP6P38760 659 aaKnown RBP4.29□□□□□ -1.72
VHS3YOR054C SMX2P40204 77 aaKnown RBP4.29□□□□□ -1.72
VHS3YOR054C JEM1P40358 645 aa4.29□□□□□ -1.72
VHS3YOR054C MKT1P40850 830 aaKnown RBP4.29□□□□□ -1.72
VHS3YOR054C GCD10P41814 478 aa4.29□□□□□ -1.72
VHS3YOR054C SET4P42948 560 aa4.29□□□□□ -1.72
VHS3YOR054C GCD14P46959 383 aaPredicted RBP4.29□□□□□ -1.72
VHS3YOR054C FMP33P46998 180 aa4.29□□□□□ -1.72
VHS3YOR054C ALB1P47019 175 aaPredicted RBP4.29□□□□□ -1.72
VHS3YOR054C ATP22P50273 684 aaPredicted RBP4.29□□□□□ -1.72
VHS3YOR054C HOS2P53096 452 aaPredicted RBP4.29□□□□□ -1.72
VHS3YOR054C MRM2P53123 320 aa4.29□□□□□ -1.72
VHS3YOR054C MLC1P53141 149 aa4.29□□□□□ -1.72
VHS3YOR054C YGR054WP53235 642 aaKnown RBP4.29□□□□□ -1.72
VHS3YOR054C NAF1P53919 492 aaKnown RBP4.29□□□□□ -1.72
VHS3YOR054C SEC10Q06245 871 aa4.29□□□□□ -1.72
VHS3YOR054C YOL036WQ08206 761 aa4.29□□□□□ -1.72
VHS3YOR054C RSA1Q08932 381 aa4.29□□□□□ -1.72
VHS3YOR054C PDE2P06776 526 aa4.29□□□□□ -1.72
VHS3YOR054C CMD1P06787 147 aaKnown RBP4.29□□□□□ -1.72
VHS3YOR054C YAK1P14680 807 aa4.29□□□□□ -1.72
VHS3YOR054C POL30P15873 258 aaKnown RBP4.29□□□□□ -1.72
VHS3YOR054C PRP6P19735 899 aaPredicted RBP4.29□□□□□ -1.72
VHS3YOR054C PHO3P24031 467 aa4.29□□□□□ -1.72
VHS3YOR054C DUR3P33413 735 aa4.29□□□□□ -1.72
VHS3YOR054C YBL055CP34220 418 aaPredicted RBP4.29□□□□□ -1.72
VHS3YOR054C VPS21P36017 210 aaKnown RBP4.29□□□□□ -1.72
VHS3YOR054C YKR078WP36158 585 aaKnown RBP4.29□□□□□ -1.72
VHS3YOR054C PGM2P37012 569 aaKnown RBP4.29□□□□□ -1.72
VHS3YOR054C KTR3P38130 404 aaPredicted RBP4.29□□□□□ -1.72
VHS3YOR054C ERP5P38819 212 aa4.29□□□□□ -1.72
VHS3YOR054C VFA1P40080 203 aa4.29□□□□□ -1.72
VHS3YOR054C RIC1P40395 1056 aa4.29□□□□□ -1.72
VHS3YOR054C YGR237CP50089 785 aa4.29□□□□□ -1.72
VHS3YOR054C REX2P54964 269 aaKnown RBP4.29□□□□□ -1.72
VHS3YOR054C EBS1Q03466 884 aaKnown RBP4.29□□□□□ -1.72
VHS3YOR054C ARP9Q05123 467 aa4.29□□□□□ -1.72
VHS3YOR054C MRX10Q05648 414 aa4.29□□□□□ -1.72
VHS3YOR054C DCS1Q06151 350 aa4.29□□□□□ -1.72
VHS3YOR054C SOG2Q08817 791 aa4.29□□□□□ -1.72
VHS3YOR054C RKM1Q08961 583 aaPredicted RBP4.29□□□□□ -1.72
VHS3YOR054C LAM4P38800 1345 aa4.28□□□□□ -1.72
VHS3YOR054C PGK1P00560 416 aaKnown RBP4.28□□□□□ -1.72
VHS3YOR054C DPS1P04802 557 aaKnown RBP4.28□□□□□ -1.72
VHS3YOR054C CDC31P06704 161 aaKnown RBP4.28□□□□□ -1.72
VHS3YOR054C PPR1P07272 904 aaPredicted RBP4.28□□□□□ -1.72
VHS3YOR054C MPH2P0CD99 609 aa4.28□□□□□ -1.72
VHS3YOR054C URA4P20051 364 aa4.28□□□□□ -1.72
VHS3YOR054C TSR4P25040 408 aa4.28□□□□□ -1.72
VHS3YOR054C HSP30P25619 332 aa4.28□□□□□ -1.72
VHS3YOR054C HXT1P32465 570 aa4.28□□□□□ -1.72
VHS3YOR054C TRZ1P36159 838 aaPredicted RBP4.28□□□□□ -1.72
VHS3YOR054C IFA38P38286 347 aa4.28□□□□□ -1.72
VHS3YOR054C AST2P39945 430 aaKnown RBP4.28□□□□□ -1.72
VHS3YOR054C SNL1P40548 159 aa4.28□□□□□ -1.72
VHS3YOR054C IES1P43579 692 aa4.28□□□□□ -1.72
VHS3YOR054C YJR054WP47114 497 aa4.28□□□□□ -1.72
VHS3YOR054C DAN4P47179 1161 aa4.28□□□□□ -1.72
VHS3YOR054C GCV2P49095 1034 aa4.28□□□□□ -1.72
VHS3YOR054C KAP114P53067 1004 aa4.28□□□□□ -1.72
VHS3YOR054C LSC2P53312 427 aa4.28□□□□□ -1.72
VHS3YOR054C TMA20P89886 181 aaPredicted RBP4.28□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 38.2 ms