RNA–Protein interactions for RNA: YNL293W

MSB3, Transcript of Rab GTPase-activating protein, yeast

Gene MSB3, Length 1,902 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSB3	YNL293W	RRP8	P38961	392 aa	Known RBP	7.47	□□□□□ -1.21
MSB3	YNL293W	RCY1	P39531	840 aa		7.47	□□□□□ -1.21
MSB3	YNL293W	EDC3	P39998	551 aa	Known RBP	7.47	□□□□□ -1.21
MSB3	YNL293W	MXR1	P40029	184 aa		7.47	□□□□□ -1.21
MSB3	YNL293W	TIM54	P47045	478 aa		7.47	□□□□□ -1.21
MSB3	YNL293W	RRP17	Q04031	235 aa	Predicted RBP	7.47	□□□□□ -1.21
MSB3	YNL293W	ARP9	Q05123	467 aa		7.47	□□□□□ -1.21
MSB3	YNL293W	VHS3	Q08438	674 aa		7.47	□□□□□ -1.21
MSB3	YNL293W	RPN8	Q08723	338 aa	Known RBP	7.47	□□□□□ -1.21
MSB3	YNL293W	GYP5	Q12344	894 aa		7.47	□□□□□ -1.21
MSB3	YNL293W	DPH6	Q12429	685 aa		7.47	□□□□□ -1.21
MSB3	YNL293W	POM152	P39685	1337 aa		7.47	□□□□□ -1.21
MSB3	YNL293W	TY2B-LR1	P0C2J3	1770 aa		7.46	□□□□□ -1.21
MSB3	YNL293W	TY2B-F	P0CX63	1770 aa		7.46	□□□□□ -1.21
MSB3	YNL293W	TY2B-GR2	P0CX64	1770 aa		7.46	□□□□□ -1.21
MSB3	YNL293W	TY2B-C	P25384	1770 aa		7.46	□□□□□ -1.21
MSB3	YNL293W	TY2B-DR2	Q03494	1770 aa		7.46	□□□□□ -1.21
MSB3	YNL293W	TY1B-DR1	Q03855	1755 aa		7.46	□□□□□ -1.21
MSB3	YNL293W	TY2B-DR3	Q07791	1770 aa	Known RBP	7.46	□□□□□ -1.21
MSB3	YNL293W	TY2B-OR1	Q12113	1770 aa		7.46	□□□□□ -1.21
MSB3	YNL293W	TY2B-DR1	Q12472	1770 aa		7.46	□□□□□ -1.21
MSB3	YNL293W	TY2B-B	Q12491	1770 aa		7.46	□□□□□ -1.21
MSB3	YNL293W	TY2B-OR2	Q12501	1770 aa		7.46	□□□□□ -1.21
MSB3	YNL293W	TY1B-DR3	Q99231	1755 aa		7.46	□□□□□ -1.21
MSB3	YNL293W	CDC8	P00572	216 aa		7.46	□□□□□ -1.21
MSB3	YNL293W	TUF1	P02992	437 aa	Known RBP	7.46	□□□□□ -1.21
MSB3	YNL293W	TEC1	P18412	486 aa		7.46	□□□□□ -1.21
MSB3	YNL293W	URA4	P20051	364 aa		7.46	□□□□□ -1.21
MSB3	YNL293W	URE2	P23202	354 aa	Known RBP	7.46	□□□□□ -1.21
MSB3	YNL293W	CRM1	P30822	1084 aa	Known RBP	7.46	□□□□□ -1.21
MSB3	YNL293W	MVD1	P32377	396 aa	Known RBP	7.46	□□□□□ -1.21
MSB3	YNL293W	SUV3	P32580	737 aa		7.46	□□□□□ -1.21
MSB3	YNL293W	AVT6	P40074	448 aa		7.46	□□□□□ -1.21
MSB3	YNL293W	YGR067C	P53243	804 aa		7.46	□□□□□ -1.21
MSB3	YNL293W	UBP2	Q01476	1272 aa		7.46	□□□□□ -1.21
MSB3	YNL293W	TAF11	Q04226	346 aa		7.46	□□□□□ -1.21
MSB3	YNL293W	GLO2	Q05584	274 aa		7.46	□□□□□ -1.21
MSB3	YNL293W	VPS38	Q05919	439 aa		7.46	□□□□□ -1.21
MSB3	YNL293W	PDR11	P40550	1411 aa		7.46	□□□□□ -1.22
MSB3	YNL293W	MSD1	P15179	658 aa	Known RBP	7.46	□□□□□ -1.22
MSB3	YNL293W	VPS3	P23643	1011 aa		7.46	□□□□□ -1.22
MSB3	YNL293W	SPB1	P25582	841 aa	Predicted RBP	7.46	□□□□□ -1.22
MSB3	YNL293W	RIM11	P38615	370 aa		7.46	□□□□□ -1.22
MSB3	YNL293W	SMF1	P38925	575 aa		7.46	□□□□□ -1.22
MSB3	YNL293W	MTW1	P39731	289 aa		7.46	□□□□□ -1.22
MSB3	YNL293W	YFH7	P43591	353 aa		7.46	□□□□□ -1.22
MSB3	YNL293W	ORC4	P54791	529 aa		7.46	□□□□□ -1.22
MSB3	YNL293W	ABZ2	Q03266	374 aa		7.46	□□□□□ -1.22
MSB3	YNL293W	HER2	Q03557	464 aa		7.46	□□□□□ -1.22
MSB3	YNL293W	CRN1	Q06440	651 aa		7.46	□□□□□ -1.22
MSB3	YNL293W	DTD1	Q07648	150 aa	Known RBP	7.46	□□□□□ -1.22
MSB3	YNL293W	YEH2	Q07950	538 aa		7.46	□□□□□ -1.22
MSB3	YNL293W	GET4	Q12125	312 aa		7.46	□□□□□ -1.22
MSB3	YNL293W	SIR3	P06701	978 aa		7.45	□□□□□ -1.22
MSB3	YNL293W	PGI1	P12709	554 aa	Known RBP	7.45	□□□□□ -1.22
MSB3	YNL293W	POL30	P15873	258 aa	Known RBP	7.45	□□□□□ -1.22
MSB3	YNL293W	PWP1	P21304	576 aa	Known RBP	7.45	□□□□□ -1.22
MSB3	YNL293W	PRP19	P32523	503 aa	Known RBP	7.45	□□□□□ -1.22
MSB3	YNL293W	SER3	P40054	469 aa		7.45	□□□□□ -1.22
MSB3	YNL293W	YER137C	P40083	148 aa	Known RBP	7.45	□□□□□ -1.22
MSB3	YNL293W	MDE1	P47095	244 aa		7.45	□□□□□ -1.22
MSB3	YNL293W	RAD33	Q04231	177 aa		7.45	□□□□□ -1.22
MSB3	YNL293W	EAF1	Q06337	982 aa		7.45	□□□□□ -1.22
MSB3	YNL293W	IRC3	Q06683	689 aa		7.45	□□□□□ -1.22
MSB3	YNL293W	VAC14	Q06708	880 aa		7.45	□□□□□ -1.22
MSB3	YNL293W	TAF10	Q12030	206 aa		7.45	□□□□□ -1.22
MSB3	YNL293W	ATG29	Q12092	213 aa		7.45	□□□□□ -1.22
MSB3	YNL293W	YSP2	Q06681	1438 aa		7.45	□□□□□ -1.22
MSB3	YNL293W	ULS1	Q08562	1619 aa		7.45	□□□□□ -1.22
MSB3	YNL293W	SEC63	P14906	663 aa		7.44	□□□□□ -1.22
MSB3	YNL293W	STI1	P15705	589 aa	Known RBP RIP-Chip data	7.44	□□□□□ -1.22	not detected
MSB3	YNL293W	DIT1	P21623	536 aa		7.44	□□□□□ -1.22
MSB3	YNL293W	MCM3	P24279	971 aa	Known RBP	7.44	□□□□□ -1.22
MSB3	YNL293W	PAT1	P25644	796 aa	Known RBP	7.44	□□□□□ -1.22
MSB3	YNL293W	RAD27	P26793	382 aa		7.44	□□□□□ -1.22
MSB3	YNL293W	NIP1	P32497	812 aa	Known RBP	7.44	□□□□□ -1.22
MSB3	YNL293W	YKL050C	P35736	922 aa		7.44	□□□□□ -1.22
MSB3	YNL293W	YBR287W	P38355	427 aa		7.44	□□□□□ -1.22
MSB3	YNL293W	CCT6	P39079	546 aa		7.44	□□□□□ -1.22
MSB3	YNL293W	TIF4631	P39935	952 aa	Known RBP	7.44	□□□□□ -1.22
MSB3	YNL293W	CNN1	P43618	361 aa		7.44	□□□□□ -1.22
MSB3	YNL293W	BNA3	P47039	444 aa	Known RBP	7.44	□□□□□ -1.22
MSB3	YNL293W	MAL11	P53048	616 aa		7.44	□□□□□ -1.22
MSB3	YNL293W	SRL4	Q03085	281 aa		7.44	□□□□□ -1.22
MSB3	YNL293W	RPN9	Q04062	393 aa	Known RBP	7.44	□□□□□ -1.22
MSB3	YNL293W	SHE9	Q04172	456 aa		7.44	□□□□□ -1.22
MSB3	YNL293W	IPP1	P00817	287 aa	Known RBP	7.44	□□□□□ -1.22
MSB3	YNL293W	RET1	P22276	1149 aa	Known RBP	7.44	□□□□□ -1.22
MSB3	YNL293W	LCB1	P25045	558 aa	Known RBP	7.44	□□□□□ -1.22
MSB3	YNL293W	PRD1	P25375	712 aa		7.44	□□□□□ -1.22
MSB3	YNL293W	NPT1	P39683	429 aa	Known RBP	7.44	□□□□□ -1.22
MSB3	YNL293W	SPO22	P40511	975 aa		7.44	□□□□□ -1.22
MSB3	YNL293W	YPT11	P48559	417 aa		7.44	□□□□□ -1.22
MSB3	YNL293W	TRF5	P48561	642 aa	Known RBP	7.44	□□□□□ -1.22
MSB3	YNL293W	MRPL50	P53724	139 aa		7.44	□□□□□ -1.22
MSB3	YNL293W	GOR1	P53839	350 aa		7.44	□□□□□ -1.22
MSB3	YNL293W	PGA2	P53903	129 aa		7.44	□□□□□ -1.22
MSB3	YNL293W	SWA2	Q06677	668 aa		7.44	□□□□□ -1.22
MSB3	YNL293W	GPI13	Q07830	1017 aa		7.44	□□□□□ -1.22
MSB3	YNL293W	SGO1	Q08490	590 aa		7.44	□□□□□ -1.22

Retrieved 100 of 5,963 RNA–protein pairs in 95 ms