RNA–Protein interactions for RNA: YNL257C

SIP3, Transcript of Transcription cofactor, yeast

Gene SIP3, Length 3,690 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIP3	YNL257C	CRR1	Q05790	422 aa		3.22	□□□□□ -1.89
SIP3	YNL257C	SPS1	P08458	490 aa		3.22	□□□□□ -1.89
SIP3	YNL257C	TDA3	P38758	523 aa		3.22	□□□□□ -1.89
SIP3	YNL257C	SSZ1	P38788	538 aa	Known RBP	3.22	□□□□□ -1.89
SIP3	YNL257C	SET5	P38890	526 aa	Known RBP	3.22	□□□□□ -1.89
SIP3	YNL257C	ATG16	Q03818	150 aa		3.22	□□□□□ -1.89
SIP3	YNL257C	NYV1	Q12255	253 aa		3.22	□□□□□ -1.89
SIP3	YNL257C	RMP1	Q12530	201 aa		3.22	□□□□□ -1.89
SIP3	YNL257C	PGI1	P12709	554 aa	Known RBP	3.21	□□□□□ -1.9
SIP3	YNL257C	APL1	P27351	700 aa		3.21	□□□□□ -1.9
SIP3	YNL257C	NIC96	P34077	839 aa		3.21	□□□□□ -1.9
SIP3	YNL257C	FLR1	P38124	548 aa		3.21	□□□□□ -1.9
SIP3	YNL257C	NPY1	P53164	384 aa		3.21	□□□□□ -1.9
SIP3	YNL257C	YGR012W	P53206	393 aa		3.21	□□□□□ -1.9
SIP3	YNL257C	UBX4	P54730	416 aa		3.21	□□□□□ -1.9
SIP3	YNL257C	ECM16	Q04217	1267 aa	Known RBP	3.21	□□□□□ -1.9
SIP3	YNL257C	RPN7	Q06103	429 aa	Known RBP	3.21	□□□□□ -1.9
SIP3	YNL257C	MSS18	P08593	268 aa		3.21	□□□□□ -1.9
SIP3	YNL257C	MAL31	P38156	614 aa		3.21	□□□□□ -1.9
SIP3	YNL257C	SPC105	P53148	917 aa		3.21	□□□□□ -1.9
SIP3	YNL257C	DUS1	P53759	423 aa	Known RBP	3.21	□□□□□ -1.9
SIP3	YNL257C	NSG2	P53898	299 aa		3.21	□□□□□ -1.9
SIP3	YNL257C	SUB1	P54000	292 aa	Known RBP	3.21	□□□□□ -1.9
SIP3	YNL257C	PHM6	Q05637	104 aa		3.21	□□□□□ -1.9
SIP3	YNL257C	CDC26	P14724	124 aa		3.21	□□□□□ -1.9
SIP3	YNL257C	COX11	P19516	300 aa	Known RBP	3.21	□□□□□ -1.9
SIP3	YNL257C	YHL041W	P38730	149 aa		3.21	□□□□□ -1.9
SIP3	YNL257C	DOT6	P40059	670 aa	Known RBP	3.21	□□□□□ -1.9
SIP3	YNL257C	YMR187C	Q03236	431 aa		3.21	□□□□□ -1.9
SIP3	YNL257C	SKY1	Q03656	742 aa		3.21	□□□□□ -1.9
SIP3	YNL257C	WHI4	Q07655	649 aa	Known RBP	3.21	□□□□□ -1.9
SIP3	YNL257C	PRC1	P00729	532 aa		3.2	□□□□□ -1.9
SIP3	YNL257C	ENA1	P13587	1091 aa		3.2	□□□□□ -1.9
SIP3	YNL257C	YEF3	P16521	1044 aa	Known RBP	3.2	□□□□□ -1.9
SIP3	YNL257C	KCC4	P25389	1037 aa		3.2	□□□□□ -1.9
SIP3	YNL257C	YJR039W	P47107	1121 aa		3.2	□□□□□ -1.9
SIP3	YNL257C	CEG1	Q01159	459 aa	Predicted RBP	3.2	□□□□□ -1.9
SIP3	YNL257C	ENA2	Q01896	1091 aa		3.2	□□□□□ -1.9
SIP3	YNL257C	ENA5	Q12691	1091 aa		3.2	□□□□□ -1.9
SIP3	YNL257C	SRB8	P25648	1427 aa		3.2	□□□□□ -1.9
SIP3	YNL257C	TRZ1	P36159	838 aa	Predicted RBP	3.2	□□□□□ -1.9
SIP3	YNL257C	KTR4	P38131	464 aa		3.2	□□□□□ -1.9
SIP3	YNL257C	RPT2	P40327	437 aa	Known RBP	3.2	□□□□□ -1.9
SIP3	YNL257C	YIL108W	P40483	696 aa	Known RBP	3.2	□□□□□ -1.9
SIP3	YNL257C	PCL10	P53124	433 aa		3.2	□□□□□ -1.9
SIP3	YNL257C	PLB2	Q03674	706 aa		3.2	□□□□□ -1.9
SIP3	YNL257C	YDL121C	Q07541	149 aa		3.2	□□□□□ -1.9
SIP3	YNL257C	RRP6	Q12149	733 aa	Known RBP	3.2	□□□□□ -1.9
SIP3	YNL257C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	3.2	□□□□□ -1.9	not detected
SIP3	YNL257C	YOR1	P53049	1477 aa		3.2	□□□□□ -1.9
SIP3	YNL257C	YPK9	Q12697	1472 aa		3.2	□□□□□ -1.9
SIP3	YNL257C	SWI6	P09959	803 aa		3.2	□□□□□ -1.9
SIP3	YNL257C	MSB1	P21339	1137 aa	Known RBP	3.2	□□□□□ -1.9
SIP3	YNL257C	PTP2	P29461	750 aa		3.2	□□□□□ -1.9
SIP3	YNL257C	STE14	P32584	239 aa		3.2	□□□□□ -1.9
SIP3	YNL257C	YKL222C	P35995	705 aa		3.2	□□□□□ -1.9
SIP3	YNL257C	SHR5	P41912	237 aa		3.2	□□□□□ -1.9
SIP3	YNL257C	ORC3	P54790	616 aa		3.2	□□□□□ -1.9
SIP3	YNL257C	MYO4	P32492	1471 aa		3.19	□□□□□ -1.9
SIP3	YNL257C	CHS2	P14180	963 aa		3.19	□□□□□ -1.9
SIP3	YNL257C	MIP6	P38760	659 aa	Known RBP	3.19	□□□□□ -1.9
SIP3	YNL257C	BEM4	P39011	633 aa		3.19	□□□□□ -1.9
SIP3	YNL257C	YPL034W	Q03083	165 aa		3.19	□□□□□ -1.9
SIP3	YNL257C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	3.19	□□□□□ -1.9	not detected
SIP3	YNL257C	HSF1	P10961	833 aa		3.19	□□□□□ -1.9
SIP3	YNL257C	PRP4	P20053	465 aa	Known RBP	3.19	□□□□□ -1.9
SIP3	YNL257C	AKL1	P38080	1108 aa	Known RBP	3.19	□□□□□ -1.9
SIP3	YNL257C	CTF8	P38877	133 aa		3.19	□□□□□ -1.9
SIP3	YNL257C	MND2	P40577	368 aa		3.19	□□□□□ -1.9
SIP3	YNL257C	YHM2	Q04013	314 aa		3.19	□□□□□ -1.9
SIP3	YNL257C	CIA1	Q05583	330 aa		3.19	□□□□□ -1.9
SIP3	YNL257C	URN1	Q06525	465 aa	Known RBP	3.19	□□□□□ -1.9
SIP3	YNL257C	RPS9A	O13516	197 aa	Known RBP	3.18	□□□□□ -1.9
SIP3	YNL257C	SEC65	P29478	273 aa		3.18	□□□□□ -1.9
SIP3	YNL257C	SAP190	P36123	1033 aa		3.18	□□□□□ -1.9
SIP3	YNL257C	ZRG8	P40021	1076 aa		3.18	□□□□□ -1.9
SIP3	YNL257C	SLU7	Q02775	382 aa	Known RBP	3.18	□□□□□ -1.9
SIP3	YNL257C	CEF1	Q03654	590 aa	Predicted RBP	3.18	□□□□□ -1.9
SIP3	YNL257C	MLC2	Q06580	163 aa		3.18	□□□□□ -1.9
SIP3	YNL257C	YPR027C	Q12079	277 aa		3.18	□□□□□ -1.9
SIP3	YNL257C	TRP3	P00937	484 aa		3.18	□□□□□ -1.9
SIP3	YNL257C	CDC6	P09119	513 aa		3.18	□□□□□ -1.9
SIP3	YNL257C	GLN4	P13188	809 aa	Known RBP	3.18	□□□□□ -1.9
SIP3	YNL257C	TAT1	P38085	619 aa		3.18	□□□□□ -1.9
SIP3	YNL257C	HIS6	P40545	261 aa		3.18	□□□□□ -1.9
SIP3	YNL257C	URM1	P40554	99 aa	Predicted RBP	3.18	□□□□□ -1.9
SIP3	YNL257C	SLD3	P53135	668 aa		3.18	□□□□□ -1.9
SIP3	YNL257C	YGR130C	P53278	816 aa		3.18	□□□□□ -1.9
SIP3	YNL257C	MOT3	P54785	490 aa	Known RBP	3.18	□□□□□ -1.9
SIP3	YNL257C	PEX15	Q08215	383 aa		3.18	□□□□□ -1.9
SIP3	YNL257C	CYC1	P00044	109 aa	Predicted RBP	3.18	□□□□□ -1.9
SIP3	YNL257C	EXO84	P38261	753 aa		3.18	□□□□□ -1.9
SIP3	YNL257C	SDP1	P40479	209 aa		3.18	□□□□□ -1.9
SIP3	YNL257C	QRI7	P43122	407 aa		3.18	□□□□□ -1.9
SIP3	YNL257C	YLR407W	Q06070	228 aa		3.18	□□□□□ -1.9
SIP3	YNL257C	ADY3	Q07732	790 aa		3.18	□□□□□ -1.9
SIP3	YNL257C	UPC2	Q12151	913 aa		3.18	□□□□□ -1.9
SIP3	YNL257C	YDL177C	Q12257	170 aa		3.18	□□□□□ -1.9
SIP3	YNL257C	SNF2	P22082	1703 aa		3.17	□□□□□ -1.9
SIP3	YNL257C	GAL10	P04397	699 aa		3.17	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 60.3 ms