RNA–Protein interactions for RNA: YNL189W

SRP1, Transcript of Karyopherin alpha homolog, yeast

Gene SRP1, Length 1,629 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SRP1	YNL189W	MNN10	P50108	393 aa	Known RBP	4.28	□□□□□ -1.72
SRP1	YNL189W	PCL10	P53124	433 aa		4.28	□□□□□ -1.72
SRP1	YNL189W	BRE5	P53741	515 aa	Known RBP	4.28	□□□□□ -1.72
SRP1	YNL189W	TRM13	Q12383	476 aa		4.28	□□□□□ -1.72
SRP1	YNL189W	SSB1	P11484	613 aa	Known RBP	4.27	□□□□□ -1.73
SRP1	YNL189W	DAL3	P32459	195 aa		4.27	□□□□□ -1.73
SRP1	YNL189W	RPP1	P38786	293 aa		4.27	□□□□□ -1.73
SRP1	YNL189W	SSB2	P40150	613 aa	Known RBP	4.27	□□□□□ -1.73
SRP1	YNL189W	BUL1	P48524	976 aa		4.27	□□□□□ -1.73
SRP1	YNL189W	PKH1	Q03407	766 aa		4.27	□□□□□ -1.73
SRP1	YNL189W	RPS21B	Q3E754	87 aa	Known RBP	4.27	□□□□□ -1.73
SRP1	YNL189W	TDA3	P38758	523 aa		4.26	□□□□□ -1.73
SRP1	YNL189W	OAF1	P39720	1047 aa	Predicted RBP	4.26	□□□□□ -1.73
SRP1	YNL189W	FKH2	P41813	862 aa		4.26	□□□□□ -1.73
SRP1	YNL189W	ECM9	Q02202	377 aa		4.26	□□□□□ -1.73
SRP1	YNL189W	HFD1	Q04458	532 aa		4.26	□□□□□ -1.73
SRP1	YNL189W	RPS21A	P0C0V8	87 aa	Known RBP	4.25	□□□□□ -1.73
SRP1	YNL189W	ADE2	P21264	571 aa	Known RBP	4.25	□□□□□ -1.73
SRP1	YNL189W	CTS1	P29029	562 aa		4.25	□□□□□ -1.73
SRP1	YNL189W	DCG1	P32460	244 aa		4.25	□□□□□ -1.73
SRP1	YNL189W	EUG1	P32474	517 aa		4.25	□□□□□ -1.73
SRP1	YNL189W	SHM2	P37291	469 aa	Known RBP	4.25	□□□□□ -1.73
SRP1	YNL189W	FOL1	P53848	824 aa		4.25	□□□□□ -1.73
SRP1	YNL189W	TGL5	Q12043	749 aa		4.25	□□□□□ -1.73
SRP1	YNL189W	PFK1	P16861	987 aa	Known RBP	4.24	□□□□□ -1.73
SRP1	YNL189W	STE11	P23561	717 aa		4.24	□□□□□ -1.73
SRP1	YNL189W	ERG6	P25087	383 aa	Known RBP	4.24	□□□□□ -1.73
SRP1	YNL189W	SSZ1	P38788	538 aa	Known RBP	4.24	□□□□□ -1.73
SRP1	YNL189W	HXT6	P39003	570 aa	Known RBP	4.24	□□□□□ -1.73
SRP1	YNL189W	HXT7	P39004	570 aa		4.24	□□□□□ -1.73
SRP1	YNL189W	NUG1	P40010	520 aa	Known RBP	4.24	□□□□□ -1.73
SRP1	YNL189W	RET2	P43621	546 aa		4.24	□□□□□ -1.73
SRP1	YNL189W	YGR153W	P48238	217 aa		4.24	□□□□□ -1.73
SRP1	YNL189W	PRP31	P49704	494 aa	Predicted RBP	4.24	□□□□□ -1.73
SRP1	YNL189W	ORC4	P54791	529 aa		4.24	□□□□□ -1.73
SRP1	YNL189W	NRG1	Q03125	231 aa		4.24	□□□□□ -1.73
SRP1	YNL189W	YTM1	Q12024	460 aa	Predicted RBP	4.24	□□□□□ -1.73
SRP1	YNL189W	TRM11	Q12463	433 aa		4.24	□□□□□ -1.73
SRP1	YNL189W	PMA1	P05030	918 aa	Known RBP	4.24	□□□□□ -1.73
SRP1	YNL189W	ENP1	P38333	483 aa	Known RBP	4.24	□□□□□ -1.73
SRP1	YNL189W	SIC1	P38634	284 aa		4.24	□□□□□ -1.73
SRP1	YNL189W	YHR112C	P38716	378 aa		4.24	□□□□□ -1.73
SRP1	YNL189W	CCT5	P40413	562 aa	Known RBP	4.24	□□□□□ -1.73
SRP1	YNL189W	YJR039W	P47107	1121 aa		4.24	□□□□□ -1.73
SRP1	YNL189W	ESC8	Q08119	714 aa		4.24	□□□□□ -1.73
SRP1	YNL189W	ENB1	Q08299	606 aa		4.24	□□□□□ -1.73
SRP1	YNL189W	FAT1	P38225	669 aa		4.23	□□□□□ -1.73
SRP1	YNL189W	YHR202W	P38887	602 aa		4.23	□□□□□ -1.73
SRP1	YNL189W	YNL195C	P40168	261 aa		4.23	□□□□□ -1.73
SRP1	YNL189W	GZF3	P42944	551 aa	Known RBP	4.23	□□□□□ -1.73
SRP1	YNL189W	TEX1	P53851	422 aa	Known RBP	4.23	□□□□□ -1.73
SRP1	YNL189W	RGC1	Q06108	1083 aa	Known RBP	4.23	□□□□□ -1.73
SRP1	YNL189W	HCM1	P25364	564 aa		4.22	□□□□□ -1.73
SRP1	YNL189W	AKL1	P38080	1108 aa	Known RBP	4.22	□□□□□ -1.73
SRP1	YNL189W	MNN11	P46985	422 aa	Known RBP	4.22	□□□□□ -1.73
SRP1	YNL189W	ARG5,6	Q01217	863 aa		4.22	□□□□□ -1.73
SRP1	YNL189W	NGG1	P32494	702 aa		4.21	□□□□□ -1.73
SRP1	YNL189W	TOM20	P35180	183 aa		4.21	□□□□□ -1.73
SRP1	YNL189W	MAL31	P38156	614 aa		4.21	□□□□□ -1.73
SRP1	YNL189W	YBR071W	P38243	211 aa		4.21	□□□□□ -1.73
SRP1	YNL189W	BEM4	P39011	633 aa		4.21	□□□□□ -1.73
SRP1	YNL189W	SET2	P46995	733 aa	Known RBP	4.21	□□□□□ -1.73
SRP1	YNL189W	MUP1	P50276	574 aa		4.21	□□□□□ -1.73
SRP1	YNL189W	YBP2	P53169	641 aa		4.21	□□□□□ -1.73
SRP1	YNL189W	COG6	P53959	839 aa		4.21	□□□□□ -1.73
SRP1	YNL189W	YHM2	Q04013	314 aa		4.21	□□□□□ -1.73
SRP1	YNL189W	NTO1	Q12311	748 aa		4.21	□□□□□ -1.73
SRP1	YNL189W	TRP4	P07285	380 aa	Predicted RBP	4.21	□□□□□ -1.74
SRP1	YNL189W	SER1	P33330	395 aa	Known RBP	4.21	□□□□□ -1.74
SRP1	YNL189W	YBR259W	P38338	688 aa		4.21	□□□□□ -1.74
SRP1	YNL189W	YLR407W	Q06070	228 aa		4.21	□□□□□ -1.74
SRP1	YNL189W	ISA1	Q07821	250 aa	Predicted RBP	4.21	□□□□□ -1.74
SRP1	YNL189W	HFI1	Q12060	488 aa		4.21	□□□□□ -1.74
SRP1	YNL189W	IMG2	P25642	146 aa	Predicted RBP	4.2	□□□□□ -1.74
SRP1	YNL189W	SEC65	P29478	273 aa		4.2	□□□□□ -1.74
SRP1	YNL189W	OAF3	P36023	863 aa		4.2	□□□□□ -1.74
SRP1	YNL189W	APN2	P38207	520 aa		4.2	□□□□□ -1.74
SRP1	YNL189W	YBR053C	P38235	358 aa		4.2	□□□□□ -1.74
SRP1	YNL189W	PAF1	P38351	445 aa		4.2	□□□□□ -1.74
SRP1	YNL189W	LYS9	P38999	446 aa		4.2	□□□□□ -1.74
SRP1	YNL189W	GIP4	P39732	760 aa		4.2	□□□□□ -1.74
SRP1	YNL189W	GPP2	P40106	250 aa	Known RBP	4.2	□□□□□ -1.74
SRP1	YNL189W	GID8	P40208	455 aa		4.2	□□□□□ -1.74
SRP1	YNL189W	MTL1	P53214	551 aa		4.2	□□□□□ -1.74
SRP1	YNL189W	HRP1	Q99383	534 aa	Known RBP	4.2	□□□□□ -1.74
SRP1	YNL189W	PYC1	P11154	1178 aa	Known RBP	4.19	□□□□□ -1.74
SRP1	YNL189W	HRR25	P29295	494 aa	Known RBP	4.19	□□□□□ -1.74
SRP1	YNL189W	YKU70	P32807	602 aa		4.19	□□□□□ -1.74
SRP1	YNL189W	DEF1	P35732	738 aa	Known RBP	4.19	□□□□□ -1.74
SRP1	YNL189W	APL2	P36000	726 aa	Predicted RBP	4.19	□□□□□ -1.74
SRP1	YNL189W	YPS7	Q06325	596 aa		4.19	□□□□□ -1.74
SRP1	YNL189W	YLR040C	Q07988	224 aa		4.19	□□□□□ -1.74
SRP1	YNL189W	SWI6	P09959	803 aa		4.18	□□□□□ -1.74
SRP1	YNL189W	GLN4	P13188	809 aa	Known RBP	4.18	□□□□□ -1.74
SRP1	YNL189W	RNR1	P21524	888 aa	Known RBP	4.18	□□□□□ -1.74
SRP1	YNL189W	ERG4	P25340	473 aa		4.18	□□□□□ -1.74
SRP1	YNL189W	EFT1	P32324	842 aa	Known RBP	4.18	□□□□□ -1.74
SRP1	YNL189W	TFC4	P33339	1025 aa		4.18	□□□□□ -1.74
SRP1	YNL189W	DID4	P36108	232 aa		4.18	□□□□□ -1.74
SRP1	YNL189W	GET2	P40056	285 aa		4.18	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms