RNA–Protein interactions for RNA: YLR423C

ATG17, Transcript of Scaffold protein responsible for phagophore assembly site organization, yeastyeast

Gene ATG17, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG17YLR423C ADY3Q07732 790 aa7.83□□□□□ -1.16
ATG17YLR423C GPB1Q08886 897 aa7.82□□□□□ -1.16
ATG17YLR423C UPC2Q12151 913 aa7.82□□□□□ -1.16
ATG17YLR423C SWM1Q12379 170 aa7.82□□□□□ -1.16
ATG17YLR423C HIS5P07172 385 aa7.81□□□□□ -1.16
ATG17YLR423C HEM12P32347 362 aaPredicted RBP7.81□□□□□ -1.16
ATG17YLR423C POL12P38121 705 aaPredicted RBP7.81□□□□□ -1.16
ATG17YLR423C MIP6P38760 659 aaKnown RBP7.81□□□□□ -1.16
ATG17YLR423C SSZ1P38788 538 aaKnown RBP7.81□□□□□ -1.16
ATG17YLR423C YJR039WP47107 1121 aa7.81□□□□□ -1.16
ATG17YLR423C MET14Q02196 202 aa7.81□□□□□ -1.16
ATG17YLR423C RXT3Q07458 294 aa7.81□□□□□ -1.16
ATG17YLR423C YDL177CQ12257 170 aa7.81□□□□□ -1.16
ATG17YLR423C PWP2P25635 923 aaKnown RBP7.8□□□□□ -1.16
ATG17YLR423C YKU70P32807 602 aa7.8□□□□□ -1.16
ATG17YLR423C YKL133CP36066 463 aa7.8□□□□□ -1.16
ATG17YLR423C TRZ1P36159 838 aaPredicted RBP7.8□□□□□ -1.16
ATG17YLR423C URM1P40554 99 aaPredicted RBP7.8□□□□□ -1.16
ATG17YLR423C ARP4P80428 489 aa7.8□□□□□ -1.16
ATG17YLR423C PKH1Q03407 766 aa7.8□□□□□ -1.16
ATG17YLR423C PEX15Q08215 383 aa7.8□□□□□ -1.16
ATG17YLR423C APM4Q99186 491 aa7.8□□□□□ -1.16
ATG17YLR423C EMC1P25574 760 aa7.79□□□□□ -1.16
ATG17YLR423C RIM4P38741 713 aa7.79□□□□□ -1.16
ATG17YLR423C VHR1P40522 640 aa7.79□□□□□ -1.16
ATG17YLR423C PFA3P42836 336 aa7.79□□□□□ -1.16
ATG17YLR423C PIP2P52960 996 aa7.79□□□□□ -1.16
ATG17YLR423C MUS81Q04149 632 aaPredicted RBP7.79□□□□□ -1.16
ATG17YLR423C VPS24P36095 224 aaKnown RBP7.78□□□□□ -1.16
ATG17YLR423C OMA1P36163 345 aa7.78□□□□□ -1.16
ATG17YLR423C BRE5P53741 515 aaKnown RBP7.78□□□□□ -1.16
ATG17YLR423C MRPL22P53881 309 aa7.78□□□□□ -1.16
ATG17YLR423C YMR210WQ03649 449 aa7.78□□□□□ -1.16
ATG17YLR423C PTP2P29461 750 aa7.77□□□□□ -1.17
ATG17YLR423C SER1P33330 395 aaKnown RBP7.77□□□□□ -1.17
ATG17YLR423C APN2P38207 520 aa7.77□□□□□ -1.17
ATG17YLR423C YHR202WP38887 602 aa7.77□□□□□ -1.17
ATG17YLR423C MEF2P39677 819 aa7.77□□□□□ -1.17
ATG17YLR423C SET2P46995 733 aaKnown RBP7.77□□□□□ -1.17
ATG17YLR423C CEF1Q03654 590 aaPredicted RBP7.77□□□□□ -1.17
ATG17YLR423C ATG16Q03818 150 aa7.77□□□□□ -1.17
ATG17YLR423C ASM4Q05166 528 aa7.77□□□□□ -1.17
ATG17YLR423C HMI1Q12039 706 aa7.77□□□□□ -1.17
ATG17YLR423C DFG16Q99234 619 aa7.77□□□□□ -1.17
ATG17YLR423C GAL1P04385 528 aa7.76□□□□□ -1.17
ATG17YLR423C PFK1P16861 987 aaKnown RBP7.76□□□□□ -1.17
ATG17YLR423C KCC4P25389 1037 aa7.76□□□□□ -1.17
ATG17YLR423C FAT1P38225 669 aa7.76□□□□□ -1.17
ATG17YLR423C LSB3P43603 459 aaKnown RBP7.76□□□□□ -1.17
ATG17YLR423C ASI2P53895 289 aa7.76□□□□□ -1.17
ATG17YLR423C ECM38Q05902 660 aaPredicted RBP7.76□□□□□ -1.17
ATG17YLR423C SWI6P09959 803 aa7.75□□□□□ -1.17
ATG17YLR423C DPB3P27344 201 aa7.75□□□□□ -1.17
ATG17YLR423C STE14P32584 239 aa7.75□□□□□ -1.17
ATG17YLR423C APT2P36973 181 aa7.75□□□□□ -1.17
ATG17YLR423C CTH1P47976 325 aa7.75□□□□□ -1.17
ATG17YLR423C PRP31P49704 494 aaPredicted RBP7.75□□□□□ -1.17
ATG17YLR423C HOL1P53389 586 aa7.75□□□□□ -1.17
ATG17YLR423C UBX4P54730 416 aa7.75□□□□□ -1.17
ATG17YLR423C GCN5Q03330 439 aa7.75□□□□□ -1.17
ATG17YLR423C YLR407WQ06070 228 aa7.75□□□□□ -1.17
ATG17YLR423C MLC2Q06580 163 aa7.75□□□□□ -1.17
ATG17YLR423C NPC2Q12408 173 aa7.75□□□□□ -1.17
ATG17YLR423C NOP56Q12460 504 aaKnown RBP RIP-Chip data7.75□□□□□ -1.17not detected
ATG17YLR423C AKL1P38080 1108 aaKnown RBP7.74□□□□□ -1.17
ATG17YLR423C FUI1P38196 639 aa7.74□□□□□ -1.17
ATG17YLR423C MSS4P38994 779 aa7.74□□□□□ -1.17
ATG17YLR423C DUN1P39009 513 aa7.74□□□□□ -1.17
ATG17YLR423C BEM4P39011 633 aa7.74□□□□□ -1.17
ATG17YLR423C CHA4P43634 648 aa7.74□□□□□ -1.17
ATG17YLR423C SPT20P50875 604 aa7.74□□□□□ -1.17
ATG17YLR423C NCS6P53088 359 aa7.74□□□□□ -1.17
ATG17YLR423C NOP15P53927 220 aaPredicted RBP7.74□□□□□ -1.17
ATG17YLR423C LEE1Q02799 301 aaKnown RBP7.74□□□□□ -1.17
ATG17YLR423C YAP6Q03935 383 aa7.74□□□□□ -1.17
ATG17YLR423C PEX19Q07418 342 aa7.74□□□□□ -1.17
ATG17YLR423C ACK1Q07622 623 aaPredicted RBP7.74□□□□□ -1.17
ATG17YLR423C NOP12Q08208 459 aaKnown RBP7.74□□□□□ -1.17
ATG17YLR423C PGI1P12709 554 aaKnown RBP7.73□□□□□ -1.17
ATG17YLR423C GLN4P13188 809 aaKnown RBP7.73□□□□□ -1.17
ATG17YLR423C SEC21P32074 935 aaKnown RBP7.73□□□□□ -1.17
ATG17YLR423C VID28P40547 921 aa7.73□□□□□ -1.17
ATG17YLR423C VPS62P53285 467 aa7.73□□□□□ -1.17
ATG17YLR423C ISA1Q07821 250 aaPredicted RBP7.73□□□□□ -1.17
ATG17YLR423C YLR415CO13578 112 aa7.72□□□□□ -1.17
ATG17YLR423C RSC8P43609 557 aaKnown RBP7.72□□□□□ -1.17
ATG17YLR423C ECM16Q04217 1267 aaKnown RBP7.72□□□□□ -1.17
ATG17YLR423C DUS4Q06063 367 aa7.72□□□□□ -1.17
ATG17YLR423C RRP6Q12149 733 aaKnown RBP7.72□□□□□ -1.17
ATG17YLR423C RPS17AP02407 136 aaKnown RBP7.71□□□□□ -1.18
ATG17YLR423C RPS17BP14127 136 aaKnown RBP7.71□□□□□ -1.18
ATG17YLR423C TRX2P22803 104 aaKnown RBP7.71□□□□□ -1.18
ATG17YLR423C CAD1P24813 409 aaKnown RBP7.71□□□□□ -1.18
ATG17YLR423C DGR2P32330 852 aa7.71□□□□□ -1.18
ATG17YLR423C YBR259WP38338 688 aa7.71□□□□□ -1.18
ATG17YLR423C HIS6P40545 261 aa7.71□□□□□ -1.18
ATG17YLR423C SGO1Q08490 590 aa7.71□□□□□ -1.18
ATG17YLR423C GPR1Q12361 961 aa7.71□□□□□ -1.18
ATG17YLR423C PYC1P11154 1178 aaKnown RBP7.7□□□□□ -1.18
ATG17YLR423C ATP12P22135 325 aa7.7□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 40.2 ms