RNA–Protein interactions for RNA: YLR207W

HRD3, Transcript of ER membrane protein that plays a central role in ERAD, yeastyeast

Gene HRD3, Length 2,502 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRD3YLR207W FOB1O13329 566 aa2.82□□□□□ -1.96
HRD3YLR207W PHO81P17442 1178 aa2.82□□□□□ -1.96
HRD3YLR207W DBF20P32328 564 aa2.82□□□□□ -1.96
HRD3YLR207W HSL7P38274 827 aa2.82□□□□□ -1.96
HRD3YLR207W TSL1P38427 1098 aaKnown RBP2.82□□□□□ -1.96
HRD3YLR207W SAP185P40856 1058 aa2.82□□□□□ -1.96
HRD3YLR207W YFL052WP43551 465 aa2.82□□□□□ -1.96
HRD3YLR207W ALT1P52893 592 aa2.82□□□□□ -1.96
HRD3YLR207W NCE103P53615 221 aa2.82□□□□□ -1.96
HRD3YLR207W YML131WQ03102 365 aa2.82□□□□□ -1.96
HRD3YLR207W SRT1Q03175 343 aa2.82□□□□□ -1.96
HRD3YLR207W SPC19Q03954 165 aa2.82□□□□□ -1.96
HRD3YLR207W PHM6Q05637 104 aa2.82□□□□□ -1.96
HRD3YLR207W ATG33Q06485 197 aa2.82□□□□□ -1.96
HRD3YLR207W YPL277CQ08989 487 aa2.82□□□□□ -1.96
HRD3YLR207W HIF1Q12373 385 aa2.82□□□□□ -1.96
HRD3YLR207W TY1A-NL1Q12391 440 aaKnown RBP2.82□□□□□ -1.96
HRD3YLR207W RTP1Q12751 981 aa2.82□□□□□ -1.96
HRD3YLR207W OPI1P21957 404 aa2.81□□□□□ -1.96
HRD3YLR207W PRP45P28004 379 aaPredicted RBP2.81□□□□□ -1.96
HRD3YLR207W CHS3P29465 1165 aa2.81□□□□□ -1.96
HRD3YLR207W MDL2P33311 773 aa2.81□□□□□ -1.96
HRD3YLR207W APL2P36000 726 aaPredicted RBP2.81□□□□□ -1.96
HRD3YLR207W MCD4P36051 919 aa2.81□□□□□ -1.96
HRD3YLR207W DID4P36108 232 aa2.81□□□□□ -1.96
HRD3YLR207W MAL31P38156 614 aa2.81□□□□□ -1.96
HRD3YLR207W PCM1P38628 557 aaKnown RBP2.81□□□□□ -1.96
HRD3YLR207W OAF1P39720 1047 aaPredicted RBP2.81□□□□□ -1.96
HRD3YLR207W NDE1P40215 560 aa2.81□□□□□ -1.96
HRD3YLR207W TMA108P40462 946 aa2.81□□□□□ -1.96
HRD3YLR207W MNT3P40549 630 aa2.81□□□□□ -1.96
HRD3YLR207W JJJ3P47138 172 aa2.81□□□□□ -1.96
HRD3YLR207W BUL2Q03758 920 aaKnown RBP2.81□□□□□ -1.96
HRD3YLR207W CRR1Q05790 422 aa2.81□□□□□ -1.96
HRD3YLR207W SVS1Q12254 260 aa2.81□□□□□ -1.96
HRD3YLR207W HMG1P12683 1054 aa2.81□□□□□ -1.96
HRD3YLR207W SRO9P25567 434 aaKnown RBP2.81□□□□□ -1.96
HRD3YLR207W SFA1P32771 386 aa2.81□□□□□ -1.96
HRD3YLR207W AFR1P33304 620 aa2.81□□□□□ -1.96
HRD3YLR207W YKL151CP36059 337 aa2.81□□□□□ -1.96
HRD3YLR207W KTR4P38131 464 aa2.81□□□□□ -1.96
HRD3YLR207W YHL041WP38730 149 aa2.81□□□□□ -1.96
HRD3YLR207W EMP65P40085 556 aa2.81□□□□□ -1.96
HRD3YLR207W HOS4P40480 1083 aa2.81□□□□□ -1.96
HRD3YLR207W RLP7P40693 322 aaKnown RBP2.81□□□□□ -1.96
HRD3YLR207W CEP3P40969 608 aa2.81□□□□□ -1.96
HRD3YLR207W MMM1P41800 426 aa2.81□□□□□ -1.96
HRD3YLR207W YFL054CP43549 646 aa2.81□□□□□ -1.96
HRD3YLR207W MNN11P46985 422 aaKnown RBP2.81□□□□□ -1.96
HRD3YLR207W SRB7P47822 140 aa2.81□□□□□ -1.96
HRD3YLR207W TAD1P53065 400 aa2.81□□□□□ -1.96
HRD3YLR207W NPY1P53164 384 aa2.81□□□□□ -1.96
HRD3YLR207W YGR035CP53222 116 aa2.81□□□□□ -1.96
HRD3YLR207W YOR059CQ08448 450 aaKnown RBP2.81□□□□□ -1.96
HRD3YLR207W TY3B-IQ7LHG5 1498 aaKnown RBP2.81□□□□□ -1.96
HRD3YLR207W PRC1P00729 532 aa2.8□□□□□ -1.96
HRD3YLR207W HSC82P15108 705 aaKnown RBP2.8□□□□□ -1.96
HRD3YLR207W APA1P16550 321 aaKnown RBP2.8□□□□□ -1.96
HRD3YLR207W SNF5P18480 905 aa2.8□□□□□ -1.96
HRD3YLR207W NFU1P32860 256 aa2.8□□□□□ -1.96
HRD3YLR207W GIC1P38785 314 aa2.8□□□□□ -1.96
HRD3YLR207W SET5P38890 526 aaKnown RBP2.8□□□□□ -1.96
HRD3YLR207W SLD3P53135 668 aa2.8□□□□□ -1.96
HRD3YLR207W PTA1Q01329 785 aaPredicted RBP2.8□□□□□ -1.96
HRD3YLR207W NEW1Q08972 1196 aaKnown RBP2.8□□□□□ -1.96
HRD3YLR207W GCN2P15442 1659 aa2.8□□□□□ -1.96
HRD3YLR207W USO1P25386 1790 aa2.8□□□□□ -1.96
HRD3YLR207W AI1P03875 834 aa2.8□□□□□ -1.96
HRD3YLR207W NOT3P06102 836 aaKnown RBP2.8□□□□□ -1.96
HRD3YLR207W RPS24AP0CX31 135 aaKnown RBP2.8□□□□□ -1.96
HRD3YLR207W RPS24BP0CX32 135 aaKnown RBP2.8□□□□□ -1.96
HRD3YLR207W KIN2P13186 1147 aaKnown RBP2.8□□□□□ -1.96
HRD3YLR207W CYS3P31373 394 aaKnown RBP2.8□□□□□ -1.96
HRD3YLR207W RPS0AP32905 252 aaKnown RBP2.8□□□□□ -1.96
HRD3YLR207W YKR075CP36155 307 aa2.8□□□□□ -1.96
HRD3YLR207W RSC8P43609 557 aaKnown RBP2.8□□□□□ -1.96
HRD3YLR207W NIT2P47016 307 aa2.8□□□□□ -1.96
HRD3YLR207W FOL2P51601 243 aaKnown RBP2.8□□□□□ -1.96
HRD3YLR207W SFB2P53953 876 aa2.8□□□□□ -1.96
HRD3YLR207W YOL087CQ99247 1116 aa2.8□□□□□ -1.96
HRD3YLR207W URA1P28272 314 aaPredicted RBP2.79□□□□□ -1.96
HRD3YLR207W SWI3P32591 825 aa2.79□□□□□ -1.96
HRD3YLR207W AIM26P32858 118 aa2.79□□□□□ -1.96
HRD3YLR207W RFC5P38251 354 aa2.79□□□□□ -1.96
HRD3YLR207W BIT2P38346 545 aa2.79□□□□□ -1.96
HRD3YLR207W AKR1P39010 764 aa2.79□□□□□ -1.96
HRD3YLR207W ACA1P39970 489 aa2.79□□□□□ -1.96
HRD3YLR207W RET2P43621 546 aa2.79□□□□□ -1.96
HRD3YLR207W CIT3P43635 486 aa2.79□□□□□ -1.96
HRD3YLR207W MAP1Q01662 387 aaKnown RBP RIP-Chip data2.79□□□□□ -1.96not detected
HRD3YLR207W SRC1Q03707 834 aa2.79□□□□□ -1.96
HRD3YLR207W YHM2Q04013 314 aa2.79□□□□□ -1.96
HRD3YLR207W GAS5Q08193 484 aa2.79□□□□□ -1.96
HRD3YLR207W SPS1P08458 490 aa2.79□□□□□ -1.96
HRD3YLR207W HCA4P20448 770 aaKnown RBP2.79□□□□□ -1.96
HRD3YLR207W ACE2P21192 770 aa2.79□□□□□ -1.96
HRD3YLR207W APL1P27351 700 aa2.79□□□□□ -1.96
HRD3YLR207W TRK2P28584 889 aa2.79□□□□□ -1.96
HRD3YLR207W MCM10P32354 571 aa2.79□□□□□ -1.96
HRD3YLR207W DAL3P32459 195 aa2.79□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 16 ms