RNA–Protein interactions for RNA: YKL040C

NFU1, Transcript of Protein involved in iron metabolism in mitochondria, yeast

Gene NFU1, Length 771 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NFU1	YKL040C	ORC2	P32833	620 aa		4.09	□□□□□ -1.75
NFU1	YKL040C	SFB3	P38810	929 aa		4.09	□□□□□ -1.75
NFU1	YKL040C	BDH2	P39713	417 aa		4.09	□□□□□ -1.75
NFU1	YKL040C	ARG2	P40360	574 aa		4.09	□□□□□ -1.75
NFU1	YKL040C	MTL1	P53214	551 aa		4.09	□□□□□ -1.75
NFU1	YKL040C	GLG1	P36143	616 aa		4.08	□□□□□ -1.76
NFU1	YKL040C	FMO1	P38866	432 aa		4.08	□□□□□ -1.76
NFU1	YKL040C	LYS9	P38999	446 aa		4.08	□□□□□ -1.76
NFU1	YKL040C	HXT16	P47185	567 aa		4.08	□□□□□ -1.76
NFU1	YKL040C	CTR1	P49573	406 aa		4.08	□□□□□ -1.76
NFU1	YKL040C	SEC5	P89102	971 aa		4.08	□□□□□ -1.76
NFU1	YKL040C	YDR514C	Q04408	483 aa		4.08	□□□□□ -1.76
NFU1	YKL040C	WRS1	Q12109	432 aa	Known RBP	4.08	□□□□□ -1.76
NFU1	YKL040C	OSH2	Q12451	1283 aa		4.08	□□□□□ -1.76
NFU1	YKL040C	HSP60	P19882	572 aa	Known RBP	4.07	□□□□□ -1.76
NFU1	YKL040C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
NFU1	YKL040C	RLP7	P40693	322 aa	Known RBP	4.07	□□□□□ -1.76
NFU1	YKL040C	SHR5	P41912	237 aa		4.07	□□□□□ -1.76
NFU1	YKL040C	TAF8	Q03750	510 aa		4.07	□□□□□ -1.76
NFU1	YKL040C	MET7	Q08645	548 aa		4.07	□□□□□ -1.76
NFU1	YKL040C	CIT1	P00890	479 aa		4.06	□□□□□ -1.76
NFU1	YKL040C	TOM70	P07213	617 aa	Known RBP	4.06	□□□□□ -1.76
NFU1	YKL040C	RAD4	P14736	754 aa		4.06	□□□□□ -1.76
NFU1	YKL040C	MVD1	P32377	396 aa	Known RBP	4.06	□□□□□ -1.76
NFU1	YKL040C	PAC2	P39937	518 aa		4.06	□□□□□ -1.76
NFU1	YKL040C	ALG2	P43636	503 aa		4.06	□□□□□ -1.76
NFU1	YKL040C	PRP31	P49704	494 aa	Predicted RBP	4.06	□□□□□ -1.76
NFU1	YKL040C	UBC9	P50623	157 aa	Predicted RBP	4.06	□□□□□ -1.76
NFU1	YKL040C	FHN1	P53279	174 aa		4.06	□□□□□ -1.76
NFU1	YKL040C	ATP25	Q03153	612 aa		4.06	□□□□□ -1.76
NFU1	YKL040C	YDL124W	Q07551	312 aa	Known RBP	4.06	□□□□□ -1.76
NFU1	YKL040C	DIF1	O13577	133 aa		4.05	□□□□□ -1.76
NFU1	YKL040C	HOM2	P13663	365 aa	Known RBP	4.05	□□□□□ -1.76
NFU1	YKL040C	VPS34	P22543	875 aa		4.05	□□□□□ -1.76
NFU1	YKL040C	PHO11	P35842	467 aa		4.05	□□□□□ -1.76
NFU1	YKL040C	PHO12	P38693	467 aa		4.05	□□□□□ -1.76
NFU1	YKL040C	YHR112C	P38716	378 aa		4.05	□□□□□ -1.76
NFU1	YKL040C	ZDS1	P50111	915 aa	Known RBP	4.05	□□□□□ -1.76
NFU1	YKL040C	YBP2	P53169	641 aa		4.05	□□□□□ -1.76
NFU1	YKL040C	ATG4	P53867	494 aa		4.05	□□□□□ -1.76
NFU1	YKL040C	RIM13	Q03792	727 aa		4.05	□□□□□ -1.76
NFU1	YKL040C	CTK1	Q03957	528 aa	Known RBP	4.05	□□□□□ -1.76
NFU1	YKL040C	RGC1	Q06108	1083 aa	Known RBP	4.05	□□□□□ -1.76
NFU1	YKL040C	OSW1	Q08692	278 aa		4.05	□□□□□ -1.76
NFU1	YKL040C	ADE2	P21264	571 aa	Known RBP	4.04	□□□□□ -1.76
NFU1	YKL040C	BET3	P36149	193 aa		4.04	□□□□□ -1.76
NFU1	YKL040C	NUP60	P39705	539 aa		4.04	□□□□□ -1.76
NFU1	YKL040C	TY4A-J	P47023	414 aa		4.04	□□□□□ -1.76
NFU1	YKL040C	YGR125W	P53273	1036 aa		4.04	□□□□□ -1.76
NFU1	YKL040C	YDR338C	Q05497	695 aa		4.04	□□□□□ -1.76
NFU1	YKL040C	MLH3	Q12083	715 aa		4.04	□□□□□ -1.76
NFU1	YKL040C	APL2	P36000	726 aa	Predicted RBP	4.03	□□□□□ -1.76
NFU1	YKL040C	HUL4	P40985	892 aa		4.03	□□□□□ -1.76
NFU1	YKL040C	MRK1	P50873	501 aa		4.03	□□□□□ -1.76
NFU1	YKL040C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.02	□□□□□ -1.77	not detected
NFU1	YKL040C	PER1	P25625	357 aa		4.02	□□□□□ -1.77
NFU1	YKL040C	SPC29	P33419	253 aa		4.02	□□□□□ -1.77
NFU1	YKL040C	ARG5,6	Q01217	863 aa		4.02	□□□□□ -1.77
NFU1	YKL040C	SEG1	Q04279	960 aa		4.02	□□□□□ -1.77
NFU1	YKL040C	HRP1	Q99383	534 aa	Known RBP	4.02	□□□□□ -1.77
NFU1	YKL040C	THR1	P17423	357 aa	Known RBP	4.01	□□□□□ -1.77
NFU1	YKL040C	ERG6	P25087	383 aa	Known RBP	4.01	□□□□□ -1.77
NFU1	YKL040C	CCR4	P31384	837 aa	Known RBP	4.01	□□□□□ -1.77
NFU1	YKL040C	TRZ1	P36159	838 aa	Predicted RBP	4.01	□□□□□ -1.77
NFU1	YKL040C	YHR020W	P38708	688 aa	Known RBP	4.01	□□□□□ -1.77
NFU1	YKL040C	MUP3	P38734	546 aa		4.01	□□□□□ -1.77
NFU1	YKL040C	GAT1	P43574	510 aa		4.01	□□□□□ -1.77
NFU1	YKL040C	TIM54	P47045	478 aa		4.01	□□□□□ -1.77
NFU1	YKL040C	SNU71	P53207	620 aa	Known RBP	4.01	□□□□□ -1.77
NFU1	YKL040C	ALY2	P47029	1046 aa		4	□□□□□ -1.77
NFU1	YKL040C	BNA3	P47039	444 aa	Known RBP	4	□□□□□ -1.77
NFU1	YKL040C	RTA1	P53047	317 aa		4	□□□□□ -1.77
NFU1	YKL040C	MCM21	Q06675	368 aa		4	□□□□□ -1.77
NFU1	YKL040C	USV1	Q12132	391 aa		4	□□□□□ -1.77
NFU1	YKL040C	FUB1	P25659	250 aa		3.98	□□□□□ -1.77
NFU1	YKL040C	SET3	P36124	751 aa		3.98	□□□□□ -1.77
NFU1	YKL040C	PAM1	P37304	830 aa	Known RBP	3.98	□□□□□ -1.77
NFU1	YKL040C	GET2	P40056	285 aa		3.98	□□□□□ -1.77
NFU1	YKL040C	FLC1	Q08967	793 aa		3.98	□□□□□ -1.77
NFU1	YKL040C	ZRT2	Q12436	422 aa		3.98	□□□□□ -1.77
NFU1	YKL040C	ERG11	P10614	530 aa		3.97	□□□□□ -1.77
NFU1	YKL040C	APT2	P36973	181 aa		3.97	□□□□□ -1.77
NFU1	YKL040C	ORC4	P54791	529 aa		3.97	□□□□□ -1.77
NFU1	YKL040C	HMO1	Q03973	246 aa	Known RBP	3.97	□□□□□ -1.77
NFU1	YKL040C	YLR149C	Q99296	730 aa		3.97	□□□□□ -1.77
NFU1	YKL040C	CAN1	P04817	590 aa		3.96	□□□□□ -1.78
NFU1	YKL040C	GMH1	P36125	273 aa		3.96	□□□□□ -1.78
NFU1	YKL040C	MIP6	P38760	659 aa	Known RBP	3.96	□□□□□ -1.78
NFU1	YKL040C	CRP1	P38845	465 aa	Known RBP	3.96	□□□□□ -1.78
NFU1	YKL040C	LTP1	P40347	161 aa		3.96	□□□□□ -1.78
NFU1	YKL040C	BNA2	P47125	453 aa		3.96	□□□□□ -1.78
NFU1	YKL040C	RNR1	P21524	888 aa	Known RBP	3.95	□□□□□ -1.78
NFU1	YKL040C	PTP1	P25044	335 aa		3.95	□□□□□ -1.78
NFU1	YKL040C	SCS3	P53012	380 aa		3.95	□□□□□ -1.78
NFU1	YKL040C	SLK19	Q08581	821 aa	Known RBP	3.95	□□□□□ -1.78
NFU1	YKL040C	CLF1	Q12309	687 aa	Predicted RBP	3.95	□□□□□ -1.78
NFU1	YKL040C	Q0142	Q9ZZW4	58 aa		3.95	□□□□□ -1.78
NFU1	YKL040C	RSP5	P39940	809 aa	Known RBP	3.94	□□□□□ -1.78
NFU1	YKL040C	NET1	P47035	1189 aa		3.94	□□□□□ -1.78
NFU1	YKL040C	RGT2	Q12300	763 aa		3.94	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms