RNA–Protein interactions for RNA: YJL029C

VPS53, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS53, Length 2,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS53YJL029C PNG1Q02890 363 aa3.87□□□□□ -1.79
VPS53YJL029C RCR2Q03446 210 aaKnown RBP3.87□□□□□ -1.79
VPS53YJL029C TIF35Q04067 274 aaKnown RBP3.87□□□□□ -1.79
VPS53YJL029C PGS1P25578 521 aa3.86□□□□□ -1.79
VPS53YJL029C PEP7P32609 515 aa3.86□□□□□ -1.79
VPS53YJL029C VPS24P36095 224 aaKnown RBP3.86□□□□□ -1.79
VPS53YJL029C YBL036CP38197 257 aa3.86□□□□□ -1.79
VPS53YJL029C APM2P38700 605 aa3.86□□□□□ -1.79
VPS53YJL029C NUT1P53114 1132 aa3.86□□□□□ -1.79
VPS53YJL029C ART5P53244 586 aaKnown RBP3.86□□□□□ -1.79
VPS53YJL029C RPA49Q01080 415 aaPredicted RBP3.86□□□□□ -1.79
VPS53YJL029C LCD1Q04377 747 aa3.86□□□□□ -1.79
VPS53YJL029C APC5Q08683 685 aa3.86□□□□□ -1.79
VPS53YJL029C PLP2Q12017 286 aa3.86□□□□□ -1.79
VPS53YJL029C ASP3-2P0CX77 362 aa3.86□□□□□ -1.79
VPS53YJL029C ASP3-3P0CX78 362 aa3.86□□□□□ -1.79
VPS53YJL029C ASP3-4P0CX79 362 aa3.86□□□□□ -1.79
VPS53YJL029C ASP3-1P0CZ17 362 aa3.86□□□□□ -1.79
VPS53YJL029C VPS3P23643 1011 aa3.86□□□□□ -1.79
VPS53YJL029C MUD1P32605 298 aaKnown RBP3.86□□□□□ -1.79
VPS53YJL029C HEL1P36113 551 aa3.86□□□□□ -1.79
VPS53YJL029C RDH54P38086 958 aa3.86□□□□□ -1.79
VPS53YJL029C SHE3P38272 425 aaKnown RBP3.86□□□□□ -1.79
VPS53YJL029C EFM2P38347 419 aa3.86□□□□□ -1.79
VPS53YJL029C ERC1P38767 581 aa3.86□□□□□ -1.79
VPS53YJL029C CCC2P38995 1004 aa3.86□□□□□ -1.79
VPS53YJL029C KAP123P40069 1113 aaKnown RBP3.86□□□□□ -1.79
VPS53YJL029C STP1Q00947 519 aa3.86□□□□□ -1.79
VPS53YJL029C CTF3Q12748 733 aa3.86□□□□□ -1.79
VPS53YJL029C VPS13Q07878 3144 aa3.85□□□□□ -1.79
VPS53YJL029C ADE4P04046 510 aaKnown RBP3.85□□□□□ -1.79
VPS53YJL029C SCP160P06105 1222 aaKnown RBP RIP-Chip data3.85□□□□□ -1.79 RIP-Chip
VPS53YJL029C COX11P19516 300 aaKnown RBP3.85□□□□□ -1.79
VPS53YJL029C SLA2P33338 968 aa3.85□□□□□ -1.79
VPS53YJL029C PEX28P38848 579 aa3.85□□□□□ -1.79
VPS53YJL029C UBP5P39944 805 aa3.85□□□□□ -1.79
VPS53YJL029C SIP5P40210 489 aaKnown RBP3.85□□□□□ -1.79
VPS53YJL029C FAF1P40546 346 aaPredicted RBP3.85□□□□□ -1.79
VPS53YJL029C LCB2P40970 561 aa3.85□□□□□ -1.79
VPS53YJL029C POL31P46957 487 aa3.85□□□□□ -1.79
VPS53YJL029C VPS25P47142 202 aa3.85□□□□□ -1.79
VPS53YJL029C EEB1Q02891 456 aa3.85□□□□□ -1.79
VPS53YJL029C CWC21Q03375 135 aaKnown RBP3.85□□□□□ -1.79
VPS53YJL029C HCR1Q05775 265 aaKnown RBP3.85□□□□□ -1.79
VPS53YJL029C SHS1Q07657 551 aa3.85□□□□□ -1.79
VPS53YJL029C APM4Q99186 491 aa3.85□□□□□ -1.79
VPS53YJL029C ENO2P00925 437 aaKnown RBP3.85□□□□□ -1.79
VPS53YJL029C TPK1P06244 397 aa3.85□□□□□ -1.79
VPS53YJL029C IMG2P25642 146 aaPredicted RBP3.85□□□□□ -1.79
VPS53YJL029C CDC15P27636 974 aa3.85□□□□□ -1.79
VPS53YJL029C SMC3P47037 1230 aa3.85□□□□□ -1.79
VPS53YJL029C PSP1P50896 841 aaKnown RBP3.85□□□□□ -1.79
VPS53YJL029C TIM8P57744 87 aa3.85□□□□□ -1.79
VPS53YJL029C LEE1Q02799 301 aaKnown RBP3.85□□□□□ -1.79
VPS53YJL029C UTP14Q04500 899 aaKnown RBP3.85□□□□□ -1.79
VPS53YJL029C BUD20Q08004 166 aaPredicted RBP3.85□□□□□ -1.79
VPS53YJL029C TAF10Q12030 206 aa3.85□□□□□ -1.79
VPS53YJL029C ZPS1Q12512 249 aa3.85□□□□□ -1.79
VPS53YJL029C ENO1P00924 437 aaKnown RBP3.84□□□□□ -1.79
VPS53YJL029C SNF1P06782 633 aaKnown RBP3.84□□□□□ -1.79
VPS53YJL029C APE1P14904 514 aa3.84□□□□□ -1.79
VPS53YJL029C OM45P16547 393 aa3.84□□□□□ -1.79
VPS53YJL029C YEL1P34225 687 aa3.84□□□□□ -1.79
VPS53YJL029C RSM25P40496 264 aa3.84□□□□□ -1.79
VPS53YJL029C SPC98P53540 846 aa3.84□□□□□ -1.79
VPS53YJL029C PSR2Q07949 397 aa3.84□□□□□ -1.79
VPS53YJL029C RRD2Q12461 358 aa3.84□□□□□ -1.79
VPS53YJL029C DAL7P21826 554 aa3.84□□□□□ -1.8
VPS53YJL029C APL1P27351 700 aa3.84□□□□□ -1.8
VPS53YJL029C PRR1P28708 518 aa3.84□□□□□ -1.8
VPS53YJL029C SWI3P32591 825 aa3.84□□□□□ -1.8
VPS53YJL029C YKL091CP33324 310 aaKnown RBP3.84□□□□□ -1.8
VPS53YJL029C PIN4P34217 668 aaKnown RBP RIP-Chip data3.84□□□□□ -1.8not detected
VPS53YJL029C RAD55P38953 406 aa3.84□□□□□ -1.8
VPS53YJL029C RIM21P48565 533 aa3.84□□□□□ -1.8
VPS53YJL029C HSH155P49955 971 aaKnown RBP3.84□□□□□ -1.8
VPS53YJL029C YPR109WQ06104 294 aa3.84□□□□□ -1.8
VPS53YJL029C CSR1Q06705 408 aaKnown RBP3.84□□□□□ -1.8
VPS53YJL029C REC8Q12188 680 aa3.84□□□□□ -1.8
VPS53YJL029C MMP1Q12372 583 aa3.84□□□□□ -1.8
VPS53YJL029C RDS2P19541 446 aaKnown RBP3.83□□□□□ -1.8
VPS53YJL029C GAR1P28007 205 aaKnown RBP3.83□□□□□ -1.8
VPS53YJL029C TRK2P28584 889 aa3.83□□□□□ -1.8
VPS53YJL029C PEP12P32854 288 aa3.83□□□□□ -1.8
VPS53YJL029C YMC2P38087 329 aa3.83□□□□□ -1.8
VPS53YJL029C SDS3P40505 327 aa3.83□□□□□ -1.8
VPS53YJL029C CIR1P42940 261 aa3.83□□□□□ -1.8
VPS53YJL029C TPO2P53283 614 aa3.83□□□□□ -1.8
VPS53YJL029C YLR257WQ06146 321 aaKnown RBP3.83□□□□□ -1.8
VPS53YJL029C TLG2Q08144 397 aa3.83□□□□□ -1.8
VPS53YJL029C TAF13P11747 167 aa3.83□□□□□ -1.8
VPS53YJL029C CHS2P14180 963 aa3.83□□□□□ -1.8
VPS53YJL029C CDC3P32457 520 aaKnown RBP3.83□□□□□ -1.8
VPS53YJL029C ISF1P32488 338 aa3.83□□□□□ -1.8
VPS53YJL029C TSA1P34760 196 aaKnown RBP3.83□□□□□ -1.8
VPS53YJL029C SAH1P39954 449 aaKnown RBP3.83□□□□□ -1.8
VPS53YJL029C TOS3P43637 560 aa3.83□□□□□ -1.8
VPS53YJL029C YJR054WP47114 497 aa3.83□□□□□ -1.8
VPS53YJL029C NSE5Q03718 556 aa3.83□□□□□ -1.8
VPS53YJL029C GIR2Q03768 265 aaPredicted RBP3.83□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 100 ms