RNA–Protein interactions for RNA: YIL038C

NOT3, Transcript of Subunit of CCR4-NOT global transcriptional regulator, yeast

Gene NOT3, Length 2,511 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NOT3	YIL038C	PTK2	P47116	818 aa	Known RBP	5.77	□□□□□ -1.49
NOT3	YIL038C	MDM1	Q01846	1127 aa		5.77	□□□□□ -1.49
NOT3	YIL038C	FUS2	Q05670	677 aa		5.77	□□□□□ -1.49
NOT3	YIL038C	NUC1	P08466	329 aa		5.76	□□□□□ -1.49
NOT3	YIL038C	RAD53	P22216	821 aa		5.76	□□□□□ -1.49
NOT3	YIL038C	SIS1	P25294	352 aa	Known RBP	5.76	□□□□□ -1.49
NOT3	YIL038C	SPT16	P32558	1035 aa	Known RBP	5.76	□□□□□ -1.49
NOT3	YIL038C	SPT23	P35210	1082 aa		5.76	□□□□□ -1.49
NOT3	YIL038C	FAF1	P40546	346 aa	Predicted RBP	5.76	□□□□□ -1.49
NOT3	YIL038C	HXT16	P47185	567 aa		5.76	□□□□□ -1.49
NOT3	YIL038C	CEG1	Q01159	459 aa	Predicted RBP	5.76	□□□□□ -1.49
NOT3	YIL038C	SPO71	Q03868	1245 aa		5.76	□□□□□ -1.49
NOT3	YIL038C	RDS1	P25611	832 aa		5.76	□□□□□ -1.49
NOT3	YIL038C	KNS1	P32350	737 aa	Predicted RBP	5.76	□□□□□ -1.49
NOT3	YIL038C	IRE1	P32361	1115 aa		5.76	□□□□□ -1.49
NOT3	YIL038C	PXL1	P36166	706 aa		5.76	□□□□□ -1.49
NOT3	YIL038C	RFC5	P38251	354 aa		5.76	□□□□□ -1.49
NOT3	YIL038C	MSC7	P38694	644 aa		5.76	□□□□□ -1.49
NOT3	YIL038C	HXT6	P39003	570 aa	Known RBP	5.76	□□□□□ -1.49
NOT3	YIL038C	HXT7	P39004	570 aa		5.76	□□□□□ -1.49
NOT3	YIL038C	YNR065C	P53751	1116 aa		5.76	□□□□□ -1.49
NOT3	YIL038C	KEL3	Q08979	651 aa	Predicted RBP	5.76	□□□□□ -1.49
NOT3	YIL038C	DCS2	Q12123	353 aa		5.76	□□□□□ -1.49
NOT3	YIL038C	IDI1	P15496	288 aa		5.75	□□□□□ -1.49
NOT3	YIL038C	DBF20	P32328	564 aa		5.75	□□□□□ -1.49
NOT3	YIL038C	MDL2	P33311	773 aa		5.75	□□□□□ -1.49
NOT3	YIL038C	OAF1	P39720	1047 aa	Predicted RBP	5.75	□□□□□ -1.49
NOT3	YIL038C	NPP2	P39997	493 aa		5.75	□□□□□ -1.49
NOT3	YIL038C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	5.75	□□□□□ -1.49	not detected
NOT3	YIL038C	DAS1	P47005	663 aa		5.75	□□□□□ -1.49
NOT3	YIL038C	HLJ1	P48353	224 aa		5.75	□□□□□ -1.49
NOT3	YIL038C	PEX13	P80667	386 aa		5.75	□□□□□ -1.49
NOT3	YIL038C	YDR341C	Q05506	607 aa	Known RBP	5.75	□□□□□ -1.49
NOT3	YIL038C	MYO1	P08964	1928 aa		5.75	□□□□□ -1.49
NOT3	YIL038C	RPS21A	P0C0V8	87 aa	Known RBP	5.75	□□□□□ -1.49
NOT3	YIL038C	SPC29	P33419	253 aa		5.75	□□□□□ -1.49
NOT3	YIL038C	PET10	P36139	283 aa		5.75	□□□□□ -1.49
NOT3	YIL038C	AKR1	P39010	764 aa		5.75	□□□□□ -1.49
NOT3	YIL038C	PTC2	P39966	464 aa	Known RBP	5.75	□□□□□ -1.49
NOT3	YIL038C	MTC3	P53077	123 aa		5.75	□□□□□ -1.49
NOT3	YIL038C	YGR117C	P53270	476 aa		5.75	□□□□□ -1.49
NOT3	YIL038C	YML131W	Q03102	365 aa		5.75	□□□□□ -1.49
NOT3	YIL038C	UTP5	Q04177	643 aa	Known RBP	5.75	□□□□□ -1.49
NOT3	YIL038C	NBL1	Q3E7Y6	73 aa		5.75	□□□□□ -1.49
NOT3	YIL038C	YLR278C	Q05854	1341 aa		5.74	□□□□□ -1.49
NOT3	YIL038C	MBR1	P23493	339 aa		5.74	□□□□□ -1.49
NOT3	YIL038C	IMP2'	P32351	346 aa		5.74	□□□□□ -1.49
NOT3	YIL038C	MCD4	P36051	919 aa		5.74	□□□□□ -1.49
NOT3	YIL038C	YIR042C	P40586	236 aa		5.74	□□□□□ -1.49
NOT3	YIL038C	VTC2	P43585	828 aa		5.74	□□□□□ -1.49
NOT3	YIL038C	EAF6	P47128	113 aa		5.74	□□□□□ -1.49
NOT3	YIL038C	LSB1	P53281	241 aa		5.74	□□□□□ -1.49
NOT3	YIL038C	THR4	P16120	514 aa	Known RBP	5.74	□□□□□ -1.49
NOT3	YIL038C	SRP54	P20424	541 aa	Known RBP	5.74	□□□□□ -1.49
NOT3	YIL038C	HEM12	P32347	362 aa	Predicted RBP	5.74	□□□□□ -1.49
NOT3	YIL038C	TOA1	P32773	286 aa		5.74	□□□□□ -1.49
NOT3	YIL038C	YKR018C	P36114	725 aa		5.74	□□□□□ -1.49
NOT3	YIL038C	STU2	P46675	888 aa		5.74	□□□□□ -1.49
NOT3	YIL038C	VIP1	Q06685	1146 aa	Known RBP	5.74	□□□□□ -1.49
NOT3	YIL038C	HSC82	P15108	705 aa	Known RBP	5.73	□□□□□ -1.49
NOT3	YIL038C	SFL1	P20134	766 aa		5.73	□□□□□ -1.49
NOT3	YIL038C	EFM2	P38347	419 aa		5.73	□□□□□ -1.49
NOT3	YIL038C	RRM3	P38766	723 aa		5.73	□□□□□ -1.49
NOT3	YIL038C	VPS8	P39702	1274 aa		5.73	□□□□□ -1.49
NOT3	YIL038C	PCI8	P40512	444 aa		5.73	□□□□□ -1.49
NOT3	YIL038C	HUL4	P40985	892 aa		5.73	□□□□□ -1.49
NOT3	YIL038C	ECM9	Q02202	377 aa		5.73	□□□□□ -1.49
NOT3	YIL038C	ENT2	Q05785	613 aa		5.73	□□□□□ -1.49
NOT3	YIL038C	FRS2	P15625	503 aa	Known RBP	5.73	□□□□□ -1.49
NOT3	YIL038C	SAS3	P34218	831 aa		5.73	□□□□□ -1.49
NOT3	YIL038C	TBS1	P38114	1094 aa		5.73	□□□□□ -1.49
NOT3	YIL038C	VPS45	P38932	577 aa		5.73	□□□□□ -1.49
NOT3	YIL038C	SLS1	P42900	643 aa		5.73	□□□□□ -1.49
NOT3	YIL038C	ENT3	P47160	408 aa		5.73	□□□□□ -1.49
NOT3	YIL038C	BIO5	P53744	561 aa	Known RBP	5.73	□□□□□ -1.49
NOT3	YIL038C	TRS130	Q03660	1102 aa		5.73	□□□□□ -1.49
NOT3	YIL038C	PMT7	Q06644	662 aa		5.73	□□□□□ -1.49
NOT3	YIL038C	YDR056C	Q12025	205 aa		5.73	□□□□□ -1.49
NOT3	YIL038C	HTS1	P07263	546 aa	Known RBP	5.72	□□□□□ -1.49
NOT3	YIL038C	DBP5	P20449	482 aa	Known RBP	5.72	□□□□□ -1.49
NOT3	YIL038C	RIT1	P23796	513 aa		5.72	□□□□□ -1.49
NOT3	YIL038C	MRPL10	P36520	322 aa		5.72	□□□□□ -1.49
NOT3	YIL038C	FIR1	P40020	876 aa		5.72	□□□□□ -1.49
NOT3	YIL038C	UPF3	P48412	387 aa	Known RBP	5.72	□□□□□ -1.49
NOT3	YIL038C	RRT6	P53117	311 aa	Predicted RBP	5.72	□□□□□ -1.49
NOT3	YIL038C	SDA1	P53313	767 aa	Known RBP	5.72	□□□□□ -1.49
NOT3	YIL038C	CNM67	P53865	581 aa	Known RBP	5.72	□□□□□ -1.49
NOT3	YIL038C	MFM1	Q02783	413 aa		5.72	□□□□□ -1.49
NOT3	YIL038C	SDH5	Q08230	162 aa		5.72	□□□□□ -1.49
NOT3	YIL038C	RRP6	Q12149	733 aa	Known RBP	5.72	□□□□□ -1.49
NOT3	YIL038C	ERP4	Q12450	207 aa		5.72	□□□□□ -1.49
NOT3	YIL038C	AIR2	Q12476	344 aa	Known RBP	5.72	□□□□□ -1.49
NOT3	YIL038C	CSR2	Q12734	1121 aa		5.72	□□□□□ -1.49
NOT3	YIL038C	RSC1	P53236	928 aa		5.72	□□□□□ -1.49
NOT3	YIL038C	CSM3	Q04659	317 aa		5.72	□□□□□ -1.49
NOT3	YIL038C	FAP7	Q12055	197 aa	Predicted RBP	5.72	□□□□□ -1.49
NOT3	YIL038C	CHO2	P05374	869 aa	Known RBP	5.71	□□□□□ -1.5
NOT3	YIL038C	SYP1	P25623	870 aa	Known RBP	5.71	□□□□□ -1.5
NOT3	YIL038C	GSY2	P27472	705 aa		5.71	□□□□□ -1.5
NOT3	YIL038C	URA1	P28272	314 aa	Predicted RBP	5.71	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 82.2 ms