RNA–Protein interactions for RNA: YIL021W

RPB3, Transcript of RNA polymerase II third largest subunit B44, yeast

Gene RPB3, Length 957 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPB3	YIL021W	TNA1	P53322	534 aa		4.25	□□□□□ -1.73
RPB3	YIL021W	CWC24	P53769	259 aa		4.25	□□□□□ -1.73
RPB3	YIL021W	VPS75	P53853	264 aa		4.25	□□□□□ -1.73
RPB3	YIL021W	VPS60	Q03390	229 aa		4.25	□□□□□ -1.73
RPB3	YIL021W	SYF1	Q04048	859 aa	Predicted RBP	4.25	□□□□□ -1.73
RPB3	YIL021W	HCR1	Q05775	265 aa	Known RBP	4.25	□□□□□ -1.73
RPB3	YIL021W	TFC6	Q06339	672 aa		4.25	□□□□□ -1.73
RPB3	YIL021W	YCG1	Q06680	1035 aa		4.25	□□□□□ -1.73
RPB3	YIL021W	DCS2	Q12123	353 aa		4.25	□□□□□ -1.73
RPB3	YIL021W	GET3	Q12154	354 aa	Known RBP	4.25	□□□□□ -1.73
RPB3	YIL021W	FIG2	P25653	1609 aa		4.24	□□□□□ -1.73
RPB3	YIL021W	CHO2	P05374	869 aa	Known RBP	4.24	□□□□□ -1.73
RPB3	YIL021W	GCR1	P07261	785 aa		4.24	□□□□□ -1.73
RPB3	YIL021W	PET111	P08468	800 aa		4.24	□□□□□ -1.73
RPB3	YIL021W	CDC6	P09119	513 aa		4.24	□□□□□ -1.73
RPB3	YIL021W	MCM3	P24279	971 aa	Known RBP	4.24	□□□□□ -1.73
RPB3	YIL021W	CDC15	P27636	974 aa		4.24	□□□□□ -1.73
RPB3	YIL021W	URA1	P28272	314 aa	Predicted RBP	4.24	□□□□□ -1.73
RPB3	YIL021W	BMH1	P29311	267 aa	Known RBP	4.24	□□□□□ -1.73
RPB3	YIL021W	SAC6	P32599	642 aa	Known RBP	4.24	□□□□□ -1.73
RPB3	YIL021W	MAL31	P38156	614 aa		4.24	□□□□□ -1.73
RPB3	YIL021W	GIP4	P39732	760 aa		4.24	□□□□□ -1.73
RPB3	YIL021W	NPR2	P39923	615 aa		4.24	□□□□□ -1.73
RPB3	YIL021W	RPN3	P40016	523 aa	Known RBP	4.24	□□□□□ -1.73
RPB3	YIL021W	YFL054C	P43549	646 aa		4.24	□□□□□ -1.73
RPB3	YIL021W	OSW7	P43611	510 aa		4.24	□□□□□ -1.73
RPB3	YIL021W	ALG2	P43636	503 aa		4.24	□□□□□ -1.73
RPB3	YIL021W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
RPB3	YIL021W	GDE1	Q02979	1223 aa		4.24	□□□□□ -1.73
RPB3	YIL021W	YDR132C	Q03900	495 aa		4.24	□□□□□ -1.73
RPB3	YIL021W	COG4	Q06096	861 aa		4.24	□□□□□ -1.73
RPB3	YIL021W	MRD1	Q06106	887 aa	Known RBP	4.24	□□□□□ -1.73
RPB3	YIL021W	CTI6	Q08923	506 aa		4.24	□□□□□ -1.73
RPB3	YIL021W	YPL260W	Q08977	551 aa		4.24	□□□□□ -1.73
RPB3	YIL021W	SPO21	Q12411	609 aa		4.24	□□□□□ -1.73
RPB3	YIL021W	NBL1	Q3E7Y6	73 aa		4.24	□□□□□ -1.73
RPB3	YIL021W	PHO13	P19881	312 aa		4.23	□□□□□ -1.73
RPB3	YIL021W	VPS1	P21576	704 aa	Known RBP	4.23	□□□□□ -1.73
RPB3	YIL021W	MRC1	P25588	1096 aa		4.23	□□□□□ -1.73
RPB3	YIL021W	ANP1	P32629	500 aa		4.23	□□□□□ -1.73
RPB3	YIL021W	YKL222C	P35995	705 aa		4.23	□□□□□ -1.73
RPB3	YIL021W	PTK1	P36002	662 aa	Predicted RBP	4.23	□□□□□ -1.73
RPB3	YIL021W	MYO3	P36006	1272 aa		4.23	□□□□□ -1.73
RPB3	YIL021W	ADE17	P38009	592 aa	Known RBP	4.23	□□□□□ -1.73
RPB3	YIL021W	RXT2	P38255	430 aa		4.23	□□□□□ -1.73
RPB3	YIL021W	RTS1	P38903	757 aa		4.23	□□□□□ -1.73
RPB3	YIL021W	PIK1	P39104	1066 aa		4.23	□□□□□ -1.73
RPB3	YIL021W	CIN4	P39110	191 aa		4.23	□□□□□ -1.73
RPB3	YIL021W	PCI8	P40512	444 aa		4.23	□□□□□ -1.73
RPB3	YIL021W	FOL2	P51601	243 aa	Known RBP	4.23	□□□□□ -1.73
RPB3	YIL021W	SNO2	P53823	222 aa		4.23	□□□□□ -1.73
RPB3	YIL021W	HDA1	P53973	706 aa		4.23	□□□□□ -1.73
RPB3	YIL021W	GFD1	Q04839	188 aa	Known RBP	4.23	□□□□□ -1.73
RPB3	YIL021W	BDF2	Q07442	638 aa		4.23	□□□□□ -1.73
RPB3	YIL021W	TMA16	Q08687	178 aa		4.23	□□□□□ -1.73
RPB3	YIL021W	APL4	Q12028	832 aa		4.23	□□□□□ -1.73
RPB3	YIL021W	CEX1	Q12453	761 aa		4.23	□□□□□ -1.73
RPB3	YIL021W	YOL098C	Q12496	1037 aa		4.23	□□□□□ -1.73
RPB3	YIL021W	RPS13	P05756	151 aa	Known RBP	4.22	□□□□□ -1.73
RPB3	YIL021W	SPS1	P08458	490 aa		4.22	□□□□□ -1.73
RPB3	YIL021W	PET123	P17558	318 aa		4.22	□□□□□ -1.73
RPB3	YIL021W	RNR3	P21672	869 aa	Known RBP	4.22	□□□□□ -1.73
RPB3	YIL021W	MAK31	P23059	88 aa		4.22	□□□□□ -1.73
RPB3	YIL021W	TOD6	P34219	525 aa		4.22	□□□□□ -1.73
RPB3	YIL021W	SAP190	P36123	1033 aa		4.22	□□□□□ -1.73
RPB3	YIL021W	PCH2	P38126	564 aa		4.22	□□□□□ -1.73
RPB3	YIL021W	SPL2	P38839	148 aa		4.22	□□□□□ -1.73
RPB3	YIL021W	APT1	P49435	187 aa	Known RBP	4.22	□□□□□ -1.73
RPB3	YIL021W	VPS4	P52917	437 aa		4.22	□□□□□ -1.73
RPB3	YIL021W	RPT4	P53549	437 aa	Known RBP	4.22	□□□□□ -1.73
RPB3	YIL021W	RTC4	P53850	401 aa		4.22	□□□□□ -1.73
RPB3	YIL021W	ALF1	P53904	254 aa		4.22	□□□□□ -1.73
RPB3	YIL021W	IRC4	Q03036	179 aa		4.22	□□□□□ -1.73
RPB3	YIL021W	MMR1	Q06324	491 aa		4.22	□□□□□ -1.73
RPB3	YIL021W	NBA1	Q08229	501 aa	Known RBP	4.22	□□□□□ -1.73
RPB3	YIL021W	AFT2	Q08957	416 aa		4.22	□□□□□ -1.73
RPB3	YIL021W	WRS1	Q12109	432 aa	Known RBP	4.22	□□□□□ -1.73
RPB3	YIL021W	TIP41	Q12199	356 aa		4.22	□□□□□ -1.73
RPB3	YIL021W	MET6	P05694	767 aa	Known RBP	4.21	□□□□□ -1.74
RPB3	YIL021W	CDC37	P06101	506 aa	Known RBP	4.21	□□□□□ -1.74
RPB3	YIL021W	YER152C	P10356	443 aa		4.21	□□□□□ -1.74
RPB3	YIL021W	ALG1	P16661	449 aa		4.21	□□□□□ -1.74
RPB3	YIL021W	RIT1	P23796	513 aa		4.21	□□□□□ -1.74
RPB3	YIL021W	LCB1	P25045	558 aa	Known RBP	4.21	□□□□□ -1.74
RPB3	YIL021W	FRD1	P32614	470 aa	Known RBP	4.21	□□□□□ -1.74
RPB3	YIL021W	RPT3	P33298	428 aa	Known RBP	4.21	□□□□□ -1.74
RPB3	YIL021W	CCZ1	P38273	704 aa		4.21	□□□□□ -1.74
RPB3	YIL021W	CAJ1	P39101	391 aa		4.21	□□□□□ -1.74
RPB3	YIL021W	CSM2	P40465	213 aa		4.21	□□□□□ -1.74
RPB3	YIL021W	SEC26	P41810	973 aa	Known RBP	4.21	□□□□□ -1.74
RPB3	YIL021W	YFH7	P43591	353 aa		4.21	□□□□□ -1.74
RPB3	YIL021W	FYV8	P46949	817 aa	Known RBP	4.21	□□□□□ -1.74
RPB3	YIL021W	PRP31	P49704	494 aa	Predicted RBP	4.21	□□□□□ -1.74
RPB3	YIL021W	PIP2	P52960	996 aa		4.21	□□□□□ -1.74
RPB3	YIL021W	UBX2	Q04228	584 aa		4.21	□□□□□ -1.74
RPB3	YIL021W	EIS1	Q05050	843 aa	Known RBP	4.21	□□□□□ -1.74
RPB3	YIL021W	VPS38	Q05919	439 aa		4.21	□□□□□ -1.74
RPB3	YIL021W	MRL1	Q06815	381 aa		4.21	□□□□□ -1.74
RPB3	YIL021W	PSF3	Q12146	194 aa		4.21	□□□□□ -1.74
RPB3	YIL021W	YOR111W	Q99210	232 aa		4.21	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 131.4 ms