RNA–Protein interactions for RNA: YHR200W

RPN10, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN10, Length 807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN10YHR200W IME1P21190 360 aa14.79□□□□□ -0.04
RPN10YHR200W PRR1P28708 518 aa14.79□□□□□ -0.04
RPN10YHR200W RRP1P35178 278 aaPredicted RBP14.79□□□□□ -0.04
RPN10YHR200W EXO5P38289 585 aa14.79□□□□□ -0.04
RPN10YHR200W DYS1P38791 387 aa14.79□□□□□ -0.04
RPN10YHR200W SAD1P43589 448 aa14.79□□□□□ -0.04
RPN10YHR200W MUK1Q02866 612 aa14.79□□□□□ -0.04
RPN10YHR200W YLR001CQ07895 862 aa14.79□□□□□ -0.04
RPN10YHR200W YER152CP10356 443 aa14.78□□□□□ -0.04
RPN10YHR200W RPL4AP10664 362 aaKnown RBP14.78□□□□□ -0.04
RPN10YHR200W RRT12P25381 491 aa14.78□□□□□ -0.04
RPN10YHR200W DRE2P36152 348 aa14.78□□□□□ -0.04
RPN10YHR200W RPL4BP49626 362 aaKnown RBP14.78□□□□□ -0.04
RPN10YHR200W NOP13P53883 403 aaKnown RBP RIP-Chip data14.78□□□□□ -0.04not detected
RPN10YHR200W FMP30Q02883 468 aa14.78□□□□□ -0.04
RPN10YHR200W ECM3Q99252 613 aa14.78□□□□□ -0.04
RPN10YHR200W COX4P04037 155 aa14.77□□□□□ -0.05
RPN10YHR200W SAH1P39954 449 aaKnown RBP14.77□□□□□ -0.05
RPN10YHR200W MAD1P40957 749 aa14.77□□□□□ -0.05
RPN10YHR200W YGR111WP53265 400 aa14.77□□□□□ -0.05
RPN10YHR200W YLR455WQ06188 304 aa14.77□□□□□ -0.05
RPN10YHR200W GAL10P04397 699 aa14.76□□□□□ -0.05
RPN10YHR200W CDC11P32458 415 aa14.76□□□□□ -0.05
RPN10YHR200W AVT3P36062 692 aa14.76□□□□□ -0.05
RPN10YHR200W ULI1P43604 169 aa14.76□□□□□ -0.05
RPN10YHR200W GCV2P49095 1034 aa14.76□□□□□ -0.05
RPN10YHR200W HOP2P53187 214 aa14.76□□□□□ -0.05
RPN10YHR200W YMR114CQ04471 368 aaKnown RBP14.76□□□□□ -0.05
RPN10YHR200W SDH5Q08230 162 aa14.76□□□□□ -0.05
RPN10YHR200W DNL4Q08387 944 aaPredicted RBP14.76□□□□□ -0.05
RPN10YHR200W SPT2P06843 333 aaPredicted RBP14.75□□□□□ -0.05
RPN10YHR200W EFB1P32471 206 aaKnown RBP14.75□□□□□ -0.05
RPN10YHR200W YER186CP40101 306 aa14.75□□□□□ -0.05
RPN10YHR200W PHO86P46956 311 aa14.75□□□□□ -0.05
RPN10YHR200W CWC22P53333 577 aaKnown RBP14.75□□□□□ -0.05
RPN10YHR200W POB3Q04636 552 aaKnown RBP14.75□□□□□ -0.05
RPN10YHR200W ADE4P04046 510 aaKnown RBP14.74□□□□□ -0.05
RPN10YHR200W TIF1P10081 395 aaKnown RBP14.74□□□□□ -0.05
RPN10YHR200W RNR1P21524 888 aaKnown RBP14.74□□□□□ -0.05
RPN10YHR200W VMA4P22203 233 aaKnown RBP14.74□□□□□ -0.05
RPN10YHR200W KDX1P36005 433 aa14.74□□□□□ -0.05
RPN10YHR200W NOP4P37838 685 aaKnown RBP14.74□□□□□ -0.05
RPN10YHR200W RCK2P38623 610 aa14.74□□□□□ -0.05
RPN10YHR200W HIS2P38635 335 aa14.74□□□□□ -0.05
RPN10YHR200W TDA3P38758 523 aa14.74□□□□□ -0.05
RPN10YHR200W YJR054WP47114 497 aa14.74□□□□□ -0.05
RPN10YHR200W ALT1P52893 592 aa14.74□□□□□ -0.05
RPN10YHR200W PUF3Q07807 879 aaKnown RBP RIP-Chip data14.74□□□□□ -0.05not detected
RPN10YHR200W SIL1Q08199 421 aa14.74□□□□□ -0.05
RPN10YHR200W YDR524C-BQ3E6R4 66 aa14.74□□□□□ -0.05
RPN10YHR200W RIF1P29539 1916 aa14.74□□□□□ -0.05
RPN10YHR200W ERG11P10614 530 aa14.73□□□□□ -0.05
RPN10YHR200W CNS1P33313 385 aa14.73□□□□□ -0.05
RPN10YHR200W BCH2P36122 765 aa14.73□□□□□ -0.05
RPN10YHR200W SMF1P38925 575 aa14.73□□□□□ -0.05
RPN10YHR200W INP51P40559 946 aaKnown RBP14.73□□□□□ -0.05
RPN10YHR200W YFL040WP43562 540 aa14.73□□□□□ -0.05
RPN10YHR200W ECM30Q06673 1274 aa14.73□□□□□ -0.05
RPN10YHR200W LDB19Q12502 818 aa14.73□□□□□ -0.05
RPN10YHR200W GFA1P14742 717 aaKnown RBP14.72□□□□□ -0.05
RPN10YHR200W SCJ1P25303 377 aa14.72□□□□□ -0.05
RPN10YHR200W POT1P27796 417 aaKnown RBP RIP-Chip data14.72□□□□□ -0.05not detected
RPN10YHR200W DBF4P32325 704 aa14.72□□□□□ -0.05
RPN10YHR200W RRN6P32786 894 aa14.72□□□□□ -0.05
RPN10YHR200W YMC2P38087 329 aa14.72□□□□□ -0.05
RPN10YHR200W TBS1P38114 1094 aa14.72□□□□□ -0.05
RPN10YHR200W YHL026CP38740 315 aa14.72□□□□□ -0.05
RPN10YHR200W TVP23P38962 199 aa14.72□□□□□ -0.05
RPN10YHR200W ESL1P40456 1118 aa14.72□□□□□ -0.05
RPN10YHR200W ATG16Q03818 150 aa14.72□□□□□ -0.05
RPN10YHR200W ZRT2Q12436 422 aa14.72□□□□□ -0.05
RPN10YHR200W PTC4P38089 393 aa14.71□□□□□ -0.05
RPN10YHR200W UBX7P38349 436 aa14.71□□□□□ -0.05
RPN10YHR200W SPO74P45819 413 aa14.71□□□□□ -0.05
RPN10YHR200W RPC17P47076 161 aa14.71□□□□□ -0.05
RPN10YHR200W TIF35Q04067 274 aaKnown RBP14.71□□□□□ -0.05
RPN10YHR200W MOT1P32333 1867 aa14.71□□□□□ -0.05
RPN10YHR200W VPS3P23643 1011 aa14.7□□□□□ -0.06
RPN10YHR200W CYS3P31373 394 aaKnown RBP14.7□□□□□ -0.06
RPN10YHR200W BRL1P38770 471 aa14.7□□□□□ -0.06
RPN10YHR200W CCT4P39078 528 aaKnown RBP14.7□□□□□ -0.06
RPN10YHR200W GEM1P39722 662 aa14.7□□□□□ -0.06
RPN10YHR200W YMR1P47147 688 aaKnown RBP RIP-Chip data14.7□□□□□ -0.06not detected
RPN10YHR200W EEB1Q02891 456 aa14.7□□□□□ -0.06
RPN10YHR200W YPL034WQ03083 165 aa14.7□□□□□ -0.06
RPN10YHR200W YPR027CQ12079 277 aa14.7□□□□□ -0.06
RPN10YHR200W CTF3Q12748 733 aa14.7□□□□□ -0.06
RPN10YHR200W RSA4P25382 515 aaKnown RBP14.69□□□□□ -0.06
RPN10YHR200W PMC1P38929 1173 aaPredicted RBP14.69□□□□□ -0.06
RPN10YHR200W YDR222WQ04925 415 aa14.69□□□□□ -0.06
RPN10YHR200W ATG23Q06671 453 aa14.69□□□□□ -0.06
RPN10YHR200W JIP3O13555 125 aa14.68□□□□□ -0.06
RPN10YHR200W YLR462WO13556 202 aa14.68□□□□□ -0.06
RPN10YHR200W NCL1P38205 684 aaKnown RBP14.68□□□□□ -0.06
RPN10YHR200W SHE3P38272 425 aaKnown RBP14.68□□□□□ -0.06
RPN10YHR200W RRT2P38332 387 aa14.68□□□□□ -0.06
RPN10YHR200W YHL049CP38722 271 aa14.68□□□□□ -0.06
RPN10YHR200W YEL075CP39972 122 aa14.68□□□□□ -0.06
RPN10YHR200W YER189WP40104 122 aa14.68□□□□□ -0.06
RPN10YHR200W YFL064CP43540 174 aa14.68□□□□□ -0.06
Retrieved 100 of 5,963 RNA–protein pairs in 162.1 ms